RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 DDX10Q13206 875 aaKnown RBP8.72□□□□□ -1.01
VPS4B-205ENST00000591383 REPIN1Q9BWE0 567 aaKnown RBP8.72□□□□□ -1.01
VPS4B-205ENST00000591383 EVX2Q03828 476 aa8.71□□□□□ -1.02
VPS4B-205ENST00000591383 CHRNA2Q15822 529 aa8.71□□□□□ -1.02
VPS4B-205ENST00000591383 CC2D1BQ5T0F9 858 aaKnown RBP8.71□□□□□ -1.02
VPS4B-205ENST00000591383 ARID3AQ99856 593 aa8.71□□□□□ -1.02
VPS4B-205ENST00000591383 AFF2P51816 1311 aa8.71□□□□□ -1.02
VPS4B-205ENST00000591383 FAM208AQ9UK61 1670 aaKnown RBP8.71□□□□□ -1.02
VPS4B-205ENST00000591383 CPDO75976 1380 aa8.71□□□□□ -1.02
VPS4B-205ENST00000591383 COL18A1P39060 1754 aa8.71□□□□□ -1.02
VPS4B-205ENST00000591383 WNK3Q9BYP7 1800 aa8.7□□□□□ -1.02
VPS4B-205ENST00000591383 FYB1O15117 783 aa8.7□□□□□ -1.02
VPS4B-205ENST00000591383 GCP02774 474 aa8.7□□□□□ -1.02
VPS4B-205ENST00000591383 KCNH5Q8NCM2 988 aa8.7□□□□□ -1.02
VPS4B-205ENST00000591383 MAP2P11137 1827 aaKnown RBP8.7□□□□□ -1.02
VPS4B-205ENST00000591383 MORC1Q86VD1 984 aa8.69□□□□□ -1.02
VPS4B-205ENST00000591383 PTCD2Q8WV60 388 aaKnown RBP8.69□□□□□ -1.02
VPS4B-205ENST00000591383 NGLY1Q96IV0 654 aa8.69□□□□□ -1.02
VPS4B-205ENST00000591383 PCMTD1Q96MG8 357 aaPredicted RBP8.69□□□□□ -1.02
VPS4B-205ENST00000591383 RTL1A6NKG5 1358 aa8.69□□□□□ -1.02
VPS4B-205ENST00000591383 COL5A2P05997 1499 aaPredicted RBP8.69□□□□□ -1.02
VPS4B-205ENST00000591383 SLIT2O94813 1529 aa8.69□□□□□ -1.02
VPS4B-205ENST00000591383 CAMTA1Q9Y6Y1 1673 aa8.69□□□□□ -1.02
VPS4B-205ENST00000591383 HAX1O00165 279 aa8.68□□□□□ -1.02
VPS4B-205ENST00000591383 APBB1O00213 710 aa8.68□□□□□ -1.02
VPS4B-205ENST00000591383 RRS1Q15050 365 aaKnown RBP8.68□□□□□ -1.02
VPS4B-205ENST00000591383 TMUB1Q9BVT8 246 aa8.68□□□□□ -1.02
VPS4B-205ENST00000591383 ANO8Q9HCE9 1232 aaPredicted RBP8.68□□□□□ -1.02
VPS4B-205ENST00000591383 NPDC1Q9NQX5 325 aaPredicted RBP8.68□□□□□ -1.02
VPS4B-205ENST00000591383 PODXL2Q9NZ53 605 aa8.68□□□□□ -1.02
VPS4B-205ENST00000591383 SMG6Q86US8 1419 aaKnown RBP8.68□□□□□ -1.02
VPS4B-205ENST00000591383 CDK12Q9NYV4 1490 aaPredicted RBP8.68□□□□□ -1.02
VPS4B-205ENST00000591383 PPM1GO15355 546 aaPredicted RBP8.67□□□□□ -1.02
VPS4B-205ENST00000591383 RGPD2P0DJD1 1756 aa8.67□□□□□ -1.02
VPS4B-205ENST00000591383 FLT4P35916 1363 aa8.67□□□□□ -1.02
VPS4B-205ENST00000591383 MAP3K19Q56UN5 1328 aa8.67□□□□□ -1.02
VPS4B-205ENST00000591383 AATKQ6ZMQ8 1374 aa8.67□□□□□ -1.02
VPS4B-205ENST00000591383 CDHR5Q9HBB8 845 aa8.67□□□□□ -1.02
VPS4B-205ENST00000591383 STRN4Q9NRL3 753 aa8.67□□□□□ -1.02
VPS4B-205ENST00000591383 BTG4Q9NY30 223 aa8.67□□□□□ -1.02
VPS4B-205ENST00000591383 NPC1L1Q9UHC9 1359 aa8.67□□□□□ -1.02
VPS4B-205ENST00000591383 USP21Q9UK80 565 aa8.67□□□□□ -1.02
VPS4B-205ENST00000591383 GLI3P10071 1580 aa8.66□□□□□ -1.02
VPS4B-205ENST00000591383 BCL9LQ86UU0 1499 aa8.66□□□□□ -1.02
VPS4B-205ENST00000591383 BLMP54132 1417 aaPredicted RBP8.66□□□□□ -1.02
VPS4B-205ENST00000591383 FBLN1P23142 703 aa8.66□□□□□ -1.02
VPS4B-205ENST00000591383 AMPHP49418 695 aa8.66□□□□□ -1.02
VPS4B-205ENST00000591383 EN1Q05925 392 aaPredicted RBP8.66□□□□□ -1.02
VPS4B-205ENST00000591383 SH3D19Q5HYK7 790 aa8.66□□□□□ -1.02
VPS4B-205ENST00000591383 ARHGEF25Q86VW2 580 aa8.66□□□□□ -1.02
VPS4B-205ENST00000591383 CCDC9Q9Y3X0 531 aaKnown RBP8.66□□□□□ -1.02
VPS4B-205ENST00000591383 EMILIN1Q9Y6C2 1016 aa8.66□□□□□ -1.02
VPS4B-205ENST00000591383 ATRNO75882 1429 aa8.65□□□□□ -1.02
VPS4B-205ENST00000591383 FAM83GA6ND36 823 aa8.65□□□□□ -1.02
VPS4B-205ENST00000591383 A6NJR5 290 aa8.65□□□□□ -1.02
VPS4B-205ENST00000591383 PER1O15534 1290 aaPredicted RBP8.65□□□□□ -1.02
VPS4B-205ENST00000591383 CSB-PGBD3P0DP91 1061 aa8.65□□□□□ -1.02
VPS4B-205ENST00000591383 CLCN1P35523 988 aa8.65□□□□□ -1.02
VPS4B-205ENST00000591383 LTV1Q96GA3 475 aaPredicted RBP8.65□□□□□ -1.02
VPS4B-205ENST00000591383 COLQQ9Y215 455 aaPredicted RBP8.65□□□□□ -1.02
VPS4B-205ENST00000591383 PARD3Q8TEW0 1356 aa8.64□□□□□ -1.03
VPS4B-205ENST00000591383 PARP4Q9UKK3 1724 aaKnown RBP8.64□□□□□ -1.03
VPS4B-205ENST00000591383 A0A0G2JS52 829 aa8.64□□□□□ -1.03
VPS4B-205ENST00000591383 PHF14O94880 888 aa8.64□□□□□ -1.03
VPS4B-205ENST00000591383 SEC24BO95487 1268 aa8.64□□□□□ -1.03
VPS4B-205ENST00000591383 HOXC9P31274 260 aa8.64□□□□□ -1.03
VPS4B-205ENST00000591383 MYT1Q01538 1121 aa8.64□□□□□ -1.03
VPS4B-205ENST00000591383 ZNF772Q68DY9 489 aaPredicted RBP8.64□□□□□ -1.03
VPS4B-205ENST00000591383 UNC5CLQ8IV45 518 aa8.64□□□□□ -1.03
VPS4B-205ENST00000591383 CLUAP1Q96AJ1 413 aa8.64□□□□□ -1.03
VPS4B-205ENST00000591383 PHOX2BQ99453 314 aa8.64□□□□□ -1.03
VPS4B-205ENST00000591383 EPAS1Q99814 870 aa8.64□□□□□ -1.03
VPS4B-205ENST00000591383 GPCPD1Q9NPB8 672 aa8.64□□□□□ -1.03
VPS4B-205ENST00000591383 LRRC37A3O60309 1634 aa8.64□□□□□ -1.03
VPS4B-205ENST00000591383 CRB1P82279 1406 aa8.63□□□□□ -1.03
VPS4B-205ENST00000591383 THSD7AQ9UPZ6 1657 aa8.63□□□□□ -1.03
VPS4B-205ENST00000591383 ERBB3P21860 1342 aa8.63□□□□□ -1.03
VPS4B-205ENST00000591383 SLC34A2O95436 690 aa8.63□□□□□ -1.03
VPS4B-205ENST00000591383 EVA1CP58658 441 aa8.63□□□□□ -1.03
VPS4B-205ENST00000591383 MDM2Q00987 491 aaPredicted RBP8.63□□□□□ -1.03
VPS4B-205ENST00000591383 ANKRD24Q8TF21 1146 aa8.63□□□□□ -1.03
VPS4B-205ENST00000591383 USP35Q9P2H5 1018 aa8.63□□□□□ -1.03
VPS4B-205ENST00000591383 COL3A1P02461 1466 aaPredicted RBP8.63□□□□□ -1.03
VPS4B-205ENST00000591383 INSRP06213 1382 aa8.62□□□□□ -1.03
VPS4B-205ENST00000591383 KIF24Q5T7B8 1368 aa8.62□□□□□ -1.03
VPS4B-205ENST00000591383 WDR17Q8IZU2 1322 aa8.62□□□□□ -1.03
VPS4B-205ENST00000591383 MAP3K7O43318 606 aa8.62□□□□□ -1.03
VPS4B-205ENST00000591383 TRAK2O60296 914 aa8.62□□□□□ -1.03
VPS4B-205ENST00000591383 SSTR3P32745 418 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-205ENST00000591383 LARP1Q6PKG0 1096 aaKnown RBP8.62□□□□□ -1.03
VPS4B-205ENST00000591383 TOM1L2Q6ZVM7 507 aa8.62□□□□□ -1.03
VPS4B-205ENST00000591383 PELP1Q8IZL8 1130 aaKnown RBP8.62□□□□□ -1.03
VPS4B-205ENST00000591383 FNBP4Q8N3X1 1017 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-205ENST00000591383 TRPC5Q9UL62 973 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-205ENST00000591383 RGPD1P0DJD0 1748 aa8.62□□□□□ -1.03
VPS4B-205ENST00000591383 RGS12O14924 1447 aa8.62□□□□□ -1.03
VPS4B-205ENST00000591383 SKIV2LQ15477 1246 aaKnown RBP8.61□□□□□ -1.03
VPS4B-205ENST00000591383 HSP90AB2PQ58FF8 381 aa8.61□□□□□ -1.03
VPS4B-205ENST00000591383 IP6K1Q92551 441 aa8.61□□□□□ -1.03
VPS4B-205ENST00000591383 NLRP2Q9NX02 1062 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms