RNA–Protein interactions for RNA: ENST00000591348.5

CROCCP3-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best)

Gene CROCCP3, Length 1,695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-206ENST00000591348 LAS1LQ9Y4W2 734 aaKnown RBP28.55■■■□□ 2.16
CROCCP3-206ENST00000591348 ITGB4P16144 1822 aa28.55■■■□□ 2.16
CROCCP3-206ENST00000591348 PIGBQ92521 554 aa28.54■■■□□ 2.16
CROCCP3-206ENST00000591348 SBF2Q86WG5 1849 aa28.53■■■□□ 2.16
CROCCP3-206ENST00000591348 IL16Q14005 1332 aa28.53■■■□□ 2.16
CROCCP3-206ENST00000591348 GOLGA2Q08379 1002 aa28.53■■■□□ 2.16
CROCCP3-206ENST00000591348 NHSQ6T4R5 1651 aa28.52■■■□□ 2.16
CROCCP3-206ENST00000591348 BTBD11A6QL63 1104 aa28.52■■■□□ 2.16
CROCCP3-206ENST00000591348 IFT57Q9NWB7 429 aa28.52■■■□□ 2.16
CROCCP3-206ENST00000591348 GNAI1P63096 354 aa28.51■■■□□ 2.16
CROCCP3-206ENST00000591348 CFAP44Q96MT7 982 aa28.51■■■□□ 2.16
CROCCP3-206ENST00000591348 SIPA1L3O60292 1781 aaPredicted RBP28.51■■■□□ 2.16
CROCCP3-206ENST00000591348 TRIM37O94972 964 aa28.51■■■□□ 2.15
CROCCP3-206ENST00000591348 BCL11BQ9C0K0 894 aaPredicted RBP28.51■■■□□ 2.15
CROCCP3-206ENST00000591348 MIS18AQ9NYP9 233 aa28.5■■■□□ 2.15
CROCCP3-206ENST00000591348 TSPYL4Q9UJ04 414 aa28.5■■■□□ 2.15
CROCCP3-206ENST00000591348 BABAM1Q9NWV8 329 aa28.49■■■□□ 2.15
CROCCP3-206ENST00000591348 PTF1AQ7RTS3 328 aa28.48■■■□□ 2.15
CROCCP3-206ENST00000591348 CHL1O00533 1208 aa28.48■■■□□ 2.15
CROCCP3-206ENST00000591348 ZNF853P0CG23 659 aa28.48■■■□□ 2.15
CROCCP3-206ENST00000591348 SPINK5Q9NQ38 1064 aaPredicted RBP28.47■■■□□ 2.15
CROCCP3-206ENST00000591348 E9PSI1 815 aa28.46■■■□□ 2.15
CROCCP3-206ENST00000591348 SLC39A6Q13433 755 aa28.46■■■□□ 2.15
CROCCP3-206ENST00000591348 TTC5Q8N0Z6 440 aa28.46■■■□□ 2.15
CROCCP3-206ENST00000591348 MYH16Q9H6N6 1097 aa28.46■■■□□ 2.15
CROCCP3-206ENST00000591348 CDCA7LQ96GN5 454 aa28.45■■■□□ 2.15
CROCCP3-206ENST00000591348 ZNF790Q6PG37 636 aa28.45■■■□□ 2.14
CROCCP3-206ENST00000591348 MBIPQ9NS73 344 aa28.45■■■□□ 2.14
CROCCP3-206ENST00000591348 ASAP1Q9ULH1 1129 aa28.45■■■□□ 2.14
CROCCP3-206ENST00000591348 ATG3Q9NT62 314 aa28.44■■■□□ 2.14
CROCCP3-206ENST00000591348 BTAF1O14981 1849 aa28.44■■■□□ 2.14
CROCCP3-206ENST00000591348 SLFN5Q08AF3 891 aa28.42■■■□□ 2.14
CROCCP3-206ENST00000591348 TSR2Q969E8 191 aaKnown RBP28.42■■■□□ 2.14
CROCCP3-206ENST00000591348 SMARCC1Q92922 1105 aaPredicted RBP28.42■■■□□ 2.14
CROCCP3-206ENST00000591348 KDM3BQ7LBC6 1761 aa28.41■■■□□ 2.14
CROCCP3-206ENST00000591348 KCNQ3O43525 872 aa28.41■■■□□ 2.14
CROCCP3-206ENST00000591348 FANCIQ9NVI1 1328 aa28.41■■■□□ 2.14
CROCCP3-206ENST00000591348 PAPPAQ13219 1627 aa28.4■■■□□ 2.14
CROCCP3-206ENST00000591348 PALLDQ8WX93 1383 aa28.39■■■□□ 2.14
CROCCP3-206ENST00000591348 PTCD1O75127 700 aaKnown RBP28.38■■■□□ 2.13
CROCCP3-206ENST00000591348 ILDR2Q71H61 639 aa28.38■■■□□ 2.13
CROCCP3-206ENST00000591348 APBA3O96018 575 aa28.37■■■□□ 2.13
CROCCP3-206ENST00000591348 FMNL2Q96PY5 1086 aa28.37■■■□□ 2.13
CROCCP3-206ENST00000591348 EIF4A1P60842 406 aaKnown RBP28.36■■■□□ 2.13
CROCCP3-206ENST00000591348 SF3B2Q13435 895 aaKnown RBP28.36■■■□□ 2.13
CROCCP3-206ENST00000591348 ZNF496Q96IT1 587 aaPredicted RBP28.36■■■□□ 2.13
CROCCP3-206ENST00000591348 TRMT2AQ8IZ69 625 aaKnown RBP28.35■■■□□ 2.13
CROCCP3-206ENST00000591348 RBM42Q9BTD8 480 aaKnown RBP28.35■■■□□ 2.13
CROCCP3-206ENST00000591348 DUSP27Q5VZP5 1158 aa28.35■■■□□ 2.13
CROCCP3-206ENST00000591348 KCPQ6ZWJ8 1503 aa28.35■■■□□ 2.13
CROCCP3-206ENST00000591348 TNS1Q9HBL0 1735 aaKnown RBP28.34■■■□□ 2.13
CROCCP3-206ENST00000591348 UBR2Q8IWV8 1755 aa28.34■■■□□ 2.13
CROCCP3-206ENST00000591348 HEG1Q9ULI3 1381 aa28.32■■■□□ 2.12
CROCCP3-206ENST00000591348 LOC102724428A0A0B4J2F2 783 aa28.32■■■□□ 2.12
CROCCP3-206ENST00000591348 SIK1P57059 783 aa28.32■■■□□ 2.12
CROCCP3-206ENST00000591348 EXOSC9Q06265 439 aaKnown RBP28.31■■■□□ 2.12
CROCCP3-206ENST00000591348 CCDC125Q86Z20 511 aa28.31■■■□□ 2.12
CROCCP3-206ENST00000591348 PLSCR1O15162 318 aa28.3■■■□□ 2.12
CROCCP3-206ENST00000591348 KRT24Q2M2I5 525 aa28.3■■■□□ 2.12
CROCCP3-206ENST00000591348 SNRPA1P09661 255 aaKnown RBP28.29■■■□□ 2.12
CROCCP3-206ENST00000591348 VSIG10Q8N0Z9 540 aa28.29■■■□□ 2.12
CROCCP3-206ENST00000591348 C8orf58Q8NAV2 365 aa28.29■■■□□ 2.12
CROCCP3-206ENST00000591348 ELL2O00472 640 aaPredicted RBP28.28■■■□□ 2.12
CROCCP3-206ENST00000591348 ATP6V1AP38606 617 aa28.28■■■□□ 2.12
CROCCP3-206ENST00000591348 BAG6P46379 1132 aa28.28■■■□□ 2.12
CROCCP3-206ENST00000591348 GIGYF1O75420 1035 aaPredicted RBP28.27■■■□□ 2.12
CROCCP3-206ENST00000591348 SLC4A9Q96Q91 983 aa28.27■■■□□ 2.12
CROCCP3-206ENST00000591348 LY75O60449 1722 aa28.27■■■□□ 2.12
CROCCP3-206ENST00000591348 CCNL1Q9UK58 526 aaPredicted RBP28.26■■■□□ 2.12
CROCCP3-206ENST00000591348 TWISTNBQ3B726 338 aaPredicted RBP28.26■■■□□ 2.11
CROCCP3-206ENST00000591348 TSPYL6Q8N831 410 aa28.26■■■□□ 2.11
CROCCP3-206ENST00000591348 UPF1Q92900 1129 aaKnown RBP eCLIP28.25■■■□□ 2.11
CROCCP3-206ENST00000591348 HOXB7P09629 217 aa28.24■■■□□ 2.11
CROCCP3-206ENST00000591348 TEX13AQ9BXU3 409 aaPredicted RBP28.24■■■□□ 2.11
CROCCP3-206ENST00000591348 PRAMEF22A3QJZ6 481 aa28.23■■■□□ 2.11
CROCCP3-206ENST00000591348 EN1Q05925 392 aaPredicted RBP28.23■■■□□ 2.11
CROCCP3-206ENST00000591348 TXNRD1Q16881 649 aa28.23■■■□□ 2.11
CROCCP3-206ENST00000591348 SLC27A3Q5K4L6 730 aa28.23■■■□□ 2.11
CROCCP3-206ENST00000591348 SOS1Q07889 1333 aaPredicted RBP28.23■■■□□ 2.11
CROCCP3-206ENST00000591348 KCNQ4P56696 695 aa28.23■■■□□ 2.11
CROCCP3-206ENST00000591348 DNAJC10Q8IXB1 793 aa28.23■■■□□ 2.11
CROCCP3-206ENST00000591348 RGPD3A6NKT7 1758 aaPredicted RBP28.22■■■□□ 2.11
CROCCP3-206ENST00000591348 RGPD4Q7Z3J3 1758 aa28.22■■■□□ 2.11
CROCCP3-206ENST00000591348 ZNF831Q5JPB2 1677 aa28.21■■■□□ 2.11
CROCCP3-206ENST00000591348 ITPK1Q13572 414 aa28.21■■■□□ 2.11
CROCCP3-206ENST00000591348 DEFB132Q7Z7B7 95 aa28.21■■■□□ 2.11
CROCCP3-206ENST00000591348 C5P01031 1676 aa28.21■■■□□ 2.11
CROCCP3-206ENST00000591348 EIF2S2P20042 333 aaKnown RBP28.2■■■□□ 2.11
CROCCP3-206ENST00000591348 USP16Q9Y5T5 823 aa28.2■■■□□ 2.11
CROCCP3-206ENST00000591348 VAMP4O75379 141 aa28.19■■■□□ 2.1
CROCCP3-206ENST00000591348 STARD3NLO95772 234 aa28.19■■■□□ 2.1
CROCCP3-206ENST00000591348 CT47B1P0C2W7 299 aaPredicted RBP28.19■■■□□ 2.1
CROCCP3-206ENST00000591348 PROM2Q8N271 834 aa28.19■■■□□ 2.1
CROCCP3-206ENST00000591348 CAMKK2Q96RR4 588 aa28.19■■■□□ 2.1
CROCCP3-206ENST00000591348 TJP1Q07157 1748 aa28.19■■■□□ 2.1
CROCCP3-206ENST00000591348 HDGFL1Q5TGJ6 251 aa28.19■■■□□ 2.1
CROCCP3-206ENST00000591348 LRRC4BQ9NT99 713 aa28.19■■■□□ 2.1
CROCCP3-206ENST00000591348 EZH2Q15910 746 aaKnown RBP28.18■■■□□ 2.1
CROCCP3-206ENST00000591348 CHMP4AQ9BY43 222 aa28.18■■■□□ 2.1
CROCCP3-206ENST00000591348 CICQ96RK0 1608 aaPredicted RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms