RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 YTHDC1Q96MU7 727 aaKnown RBP23.99■■□□□ 1.43
CROCCP3-205ENST00000591316 DOT1LQ8TEK3 1739 aa23.98■■□□□ 1.43
CROCCP3-205ENST00000591316 TOGARAM1Q9Y4F4 1720 aa23.98■■□□□ 1.43
CROCCP3-205ENST00000591316 NCBP3Q53F19 620 aaKnown RBP23.98■■□□□ 1.43
CROCCP3-205ENST00000591316 NGEFQ8N5V2 710 aa23.98■■□□□ 1.43
CROCCP3-205ENST00000591316 ATG3Q9NT62 314 aa23.97■■□□□ 1.43
CROCCP3-205ENST00000591316 SCN11AQ9UI33 1791 aa23.97■■□□□ 1.43
CROCCP3-205ENST00000591316 UPF1Q92900 1129 aaKnown RBP eCLIP23.96■■□□□ 1.43
CROCCP3-205ENST00000591316 CALD1Q05682 793 aaKnown RBP23.95■■□□□ 1.43
CROCCP3-205ENST00000591316 SBF2Q86WG5 1849 aa23.95■■□□□ 1.42
CROCCP3-205ENST00000591316 KCNQ3O43525 872 aa23.95■■□□□ 1.42
CROCCP3-205ENST00000591316 PTCD1O75127 700 aaKnown RBP23.94■■□□□ 1.42
CROCCP3-205ENST00000591316 WDR63Q8IWG1 891 aa23.94■■□□□ 1.42
CROCCP3-205ENST00000591316 TTC5Q8N0Z6 440 aa23.94■■□□□ 1.42
CROCCP3-205ENST00000591316 TSPYL4Q9UJ04 414 aa23.94■■□□□ 1.42
CROCCP3-205ENST00000591316 ITGB4P16144 1822 aa23.93■■□□□ 1.42
CROCCP3-205ENST00000591316 ZNF790Q6PG37 636 aa23.93■■□□□ 1.42
CROCCP3-205ENST00000591316 CCDC125Q86Z20 511 aa23.93■■□□□ 1.42
CROCCP3-205ENST00000591316 RBM42Q9BTD8 480 aaKnown RBP23.93■■□□□ 1.42
CROCCP3-205ENST00000591316 EN1Q05925 392 aaPredicted RBP23.92■■□□□ 1.42
CROCCP3-205ENST00000591316 DEFB132Q7Z7B7 95 aa23.92■■□□□ 1.42
CROCCP3-205ENST00000591316 SMARCC1Q92922 1105 aaPredicted RBP23.92■■□□□ 1.42
CROCCP3-205ENST00000591316 CFAP44Q96MT7 982 aa23.92■■□□□ 1.42
CROCCP3-205ENST00000591316 ADAMTS7Q9UKP4 1686 aa23.92■■□□□ 1.42
CROCCP3-205ENST00000591316 VIRMAQ69YN4 1812 aaKnown RBP23.92■■□□□ 1.42
CROCCP3-205ENST00000591316 NHSQ6T4R5 1651 aa23.91■■□□□ 1.42
CROCCP3-205ENST00000591316 CHL1O00533 1208 aa23.91■■□□□ 1.42
CROCCP3-205ENST00000591316 GNAI1P63096 354 aa23.91■■□□□ 1.42
CROCCP3-205ENST00000591316 BAG6P46379 1132 aa23.9■■□□□ 1.42
CROCCP3-205ENST00000591316 KCNQ4P56696 695 aa23.9■■□□□ 1.42
CROCCP3-205ENST00000591316 SPINK5Q9NQ38 1064 aaPredicted RBP23.9■■□□□ 1.42
CROCCP3-205ENST00000591316 IFT57Q9NWB7 429 aa23.9■■□□□ 1.42
CROCCP3-205ENST00000591316 MRC1P22897 1456 aa23.9■■□□□ 1.42
CROCCP3-205ENST00000591316 ZNF521Q96K83 1311 aa23.89■■□□□ 1.42
CROCCP3-205ENST00000591316 PLSCR1O15162 318 aa23.89■■□□□ 1.41
CROCCP3-205ENST00000591316 GOLGA2Q08379 1002 aa23.89■■□□□ 1.41
CROCCP3-205ENST00000591316 PALLDQ8WX93 1383 aa23.89■■□□□ 1.41
CROCCP3-205ENST00000591316 CDCA7LQ96GN5 454 aa23.88■■□□□ 1.41
CROCCP3-205ENST00000591316 MBIPQ9NS73 344 aa23.88■■□□□ 1.41
CROCCP3-205ENST00000591316 ZNF853P0CG23 659 aa23.87■■□□□ 1.41
CROCCP3-205ENST00000591316 EZH2Q15910 746 aaKnown RBP23.87■■□□□ 1.41
CROCCP3-205ENST00000591316 TSR2Q969E8 191 aaKnown RBP23.87■■□□□ 1.41
CROCCP3-205ENST00000591316 ZNF496Q96IT1 587 aaPredicted RBP23.87■■□□□ 1.41
CROCCP3-205ENST00000591316 BTAF1O14981 1849 aa23.87■■□□□ 1.41
CROCCP3-205ENST00000591316 BABAM1Q9NWV8 329 aa23.86■■□□□ 1.41
CROCCP3-205ENST00000591316 IL16Q14005 1332 aa23.86■■□□□ 1.41
CROCCP3-205ENST00000591316 LOC102724428A0A0B4J2F2 783 aa23.86■■□□□ 1.41
CROCCP3-205ENST00000591316 ATP6V1AP38606 617 aa23.86■■□□□ 1.41
CROCCP3-205ENST00000591316 SIK1P57059 783 aa23.86■■□□□ 1.41
CROCCP3-205ENST00000591316 PROM2Q8N271 834 aa23.86■■□□□ 1.41
CROCCP3-205ENST00000591316 TXNRD1Q16881 649 aa23.85■■□□□ 1.41
CROCCP3-205ENST00000591316 FMNL2Q96PY5 1086 aa23.85■■□□□ 1.41
CROCCP3-205ENST00000591316 EIF4A1P60842 406 aaKnown RBP23.84■■□□□ 1.41
CROCCP3-205ENST00000591316 SLC4A9Q96Q91 983 aa23.84■■□□□ 1.41
CROCCP3-205ENST00000591316 CAMKK2Q96RR4 588 aa23.84■■□□□ 1.41
CROCCP3-205ENST00000591316 CCNL1Q9UK58 526 aaPredicted RBP23.84■■□□□ 1.41
CROCCP3-205ENST00000591316 ZBED9Q6R2W3 1325 aa23.83■■□□□ 1.41
CROCCP3-205ENST00000591316 KRT24Q2M2I5 525 aa23.82■■□□□ 1.4
CROCCP3-205ENST00000591316 SIPA1L3O60292 1781 aaPredicted RBP23.82■■□□□ 1.4
CROCCP3-205ENST00000591316 ELL2O00472 640 aaPredicted RBP23.82■■□□□ 1.4
CROCCP3-205ENST00000591316 SLFN5Q08AF3 891 aa23.82■■□□□ 1.4
CROCCP3-205ENST00000591316 MYH16Q9H6N6 1097 aa23.82■■□□□ 1.4
CROCCP3-205ENST00000591316 LRRC4BQ9NT99 713 aa23.82■■□□□ 1.4
CROCCP3-205ENST00000591316 PRAMEF22A3QJZ6 481 aa23.81■■□□□ 1.4
CROCCP3-205ENST00000591316 E9PSI1 815 aa23.81■■□□□ 1.4
CROCCP3-205ENST00000591316 TNS1Q9HBL0 1735 aaKnown RBP23.8■■□□□ 1.4
CROCCP3-205ENST00000591316 FANCIQ9NVI1 1328 aa23.8■■□□□ 1.4
CROCCP3-205ENST00000591316 ITPK1Q13572 414 aa23.79■■□□□ 1.4
CROCCP3-205ENST00000591316 DNAJC10Q8IXB1 793 aa23.79■■□□□ 1.4
CROCCP3-205ENST00000591316 SNRPA1P09661 255 aaKnown RBP23.78■■□□□ 1.4
CROCCP3-205ENST00000591316 SLC27A3Q5K4L6 730 aa23.78■■□□□ 1.4
CROCCP3-205ENST00000591316 POTEDQ86YR6 584 aa23.78■■□□□ 1.4
CROCCP3-205ENST00000591316 HEG1Q9ULI3 1381 aa23.78■■□□□ 1.4
CROCCP3-205ENST00000591316 C8orf58Q8NAV2 365 aa23.78■■□□□ 1.4
CROCCP3-205ENST00000591316 USP16Q9Y5T5 823 aa23.78■■□□□ 1.4
CROCCP3-205ENST00000591316 GIGYF1O75420 1035 aaPredicted RBP23.77■■□□□ 1.4
CROCCP3-205ENST00000591316 EXOSC9Q06265 439 aaKnown RBP23.77■■□□□ 1.4
CROCCP3-205ENST00000591316 VSIG10Q8N0Z9 540 aa23.77■■□□□ 1.4
CROCCP3-205ENST00000591316 KCPQ6ZWJ8 1503 aa23.76■■□□□ 1.39
CROCCP3-205ENST00000591316 EIF2S2P20042 333 aaKnown RBP23.75■■□□□ 1.39
CROCCP3-205ENST00000591316 DUSP27Q5VZP5 1158 aa23.75■■□□□ 1.39
CROCCP3-205ENST00000591316 TSPYL6Q8N831 410 aa23.75■■□□□ 1.39
CROCCP3-205ENST00000591316 NECTIN2Q92692 538 aa23.75■■□□□ 1.39
CROCCP3-205ENST00000591316 LINC00116Q8NCU8 138 aa23.74■■□□□ 1.39
CROCCP3-205ENST00000591316 TEX13AQ9BXU3 409 aaPredicted RBP23.74■■□□□ 1.39
CROCCP3-205ENST00000591316 KDM3BQ7LBC6 1761 aa23.73■■□□□ 1.39
CROCCP3-205ENST00000591316 PAPPAQ13219 1627 aa23.73■■□□□ 1.39
CROCCP3-205ENST00000591316 STARD3NLO95772 234 aa23.73■■□□□ 1.39
CROCCP3-205ENST00000591316 TRMT2AQ8IZ69 625 aaKnown RBP23.73■■□□□ 1.39
CROCCP3-205ENST00000591316 CYP19A1P11511 503 aaPredicted RBP23.71■■□□□ 1.39
CROCCP3-205ENST00000591316 TWISTNBQ3B726 338 aaPredicted RBP23.71■■□□□ 1.39
CROCCP3-205ENST00000591316 A1BGP04217 495 aa23.7■■□□□ 1.38
CROCCP3-205ENST00000591316 LY75O60449 1722 aa23.7■■□□□ 1.38
CROCCP3-205ENST00000591316 PIP4K2AP48426 406 aaPredicted RBP23.69■■□□□ 1.38
CROCCP3-205ENST00000591316 CRKLP46109 303 aaKnown RBP23.69■■□□□ 1.38
CROCCP3-205ENST00000591316 UBR2Q8IWV8 1755 aa23.68■■□□□ 1.38
CROCCP3-205ENST00000591316 CANXP27824 592 aaKnown RBP23.68■■□□□ 1.38
CROCCP3-205ENST00000591316 TCERG1O14776 1098 aaKnown RBP23.67■■□□□ 1.38
CROCCP3-205ENST00000591316 VAMP4O75379 141 aa23.67■■□□□ 1.38
CROCCP3-205ENST00000591316 HDGFL1Q5TGJ6 251 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms