RNA–Protein interactions for RNA: ENST00000591157.1

TMED1-206, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-206ENST00000591157 ATG3Q9NT62 314 aa21.86■■□□□ 1.09
TMED1-206ENST00000591157 LRRC4BQ9NT99 713 aa21.85■■□□□ 1.09
TMED1-206ENST00000591157 CEMIPQ8WUJ3 1361 aa21.85■■□□□ 1.09
TMED1-206ENST00000591157 DCTN1Q14203 1278 aa21.84■■□□□ 1.09
TMED1-206ENST00000591157 DIEXFQ68CQ4 756 aaKnown RBP21.84■■□□□ 1.09
TMED1-206ENST00000591157 MCM10Q7L590 875 aa21.84■■□□□ 1.09
TMED1-206ENST00000591157 SMARCC1Q92922 1105 aaPredicted RBP21.84■■□□□ 1.09
TMED1-206ENST00000591157 RUNDC1Q96C34 613 aa21.84■■□□□ 1.09
TMED1-206ENST00000591157 ANO8Q9HCE9 1232 aaPredicted RBP21.84■■□□□ 1.09
TMED1-206ENST00000591157 PNISRQ8TF01 805 aaKnown RBP21.83■■□□□ 1.09
TMED1-206ENST00000591157 CCNL1Q9UK58 526 aaPredicted RBP21.83■■□□□ 1.09
TMED1-206ENST00000591157 SLC27A3Q5K4L6 730 aa21.82■■□□□ 1.08
TMED1-206ENST00000591157 RTF1Q92541 710 aaKnown RBP21.82■■□□□ 1.08
TMED1-206ENST00000591157 C5P01031 1676 aa21.82■■□□□ 1.08
TMED1-206ENST00000591157 TAF1LQ8IZX4 1826 aa21.81■■□□□ 1.08
TMED1-206ENST00000591157 TEFQ10587 303 aa21.81■■□□□ 1.08
TMED1-206ENST00000591157 RRP7AQ9Y3A4 280 aaKnown RBP21.81■■□□□ 1.08
TMED1-206ENST00000591157 PSDA5PKW4 1024 aaPredicted RBP21.8■■□□□ 1.08
TMED1-206ENST00000591157 TMPOP42166 694 aaKnown RBP21.8■■□□□ 1.08
TMED1-206ENST00000591157 LOC102724428A0A0B4J2F2 783 aa21.79■■□□□ 1.08
TMED1-206ENST00000591157 HTATSF1O43719 755 aaKnown RBP21.79■■□□□ 1.08
TMED1-206ENST00000591157 SIK1P57059 783 aa21.79■■□□□ 1.08
TMED1-206ENST00000591157 SLC39A6Q13433 755 aa21.79■■□□□ 1.08
TMED1-206ENST00000591157 RIPK4P57078 832 aa21.78■■□□□ 1.08
TMED1-206ENST00000591157 R3HDM1Q15032 1099 aaKnown RBP21.78■■□□□ 1.08
TMED1-206ENST00000591157 NBPF14Q5TI25 921 aa21.78■■□□□ 1.08
TMED1-206ENST00000591157 THUMPD2Q9BTF0 503 aaKnown RBP21.78■■□□□ 1.08
TMED1-206ENST00000591157 KCPQ6ZWJ8 1503 aa21.78■■□□□ 1.08
TMED1-206ENST00000591157 UBR2Q8IWV8 1755 aa21.78■■□□□ 1.08
TMED1-206ENST00000591157 NEUROD2Q15784 382 aa21.77■■□□□ 1.08
TMED1-206ENST00000591157 ZNF827Q17R98 1081 aa21.77■■□□□ 1.08
TMED1-206ENST00000591157 RBM42Q9BTD8 480 aaKnown RBP21.77■■□□□ 1.08
TMED1-206ENST00000591157 ZNF831Q5JPB2 1677 aa21.76■■□□□ 1.07
TMED1-206ENST00000591157 PTCD1O75127 700 aaKnown RBP21.76■■□□□ 1.07
TMED1-206ENST00000591157 SLC4A9Q96Q91 983 aa21.76■■□□□ 1.07
TMED1-206ENST00000591157 TUBGCP6Q96RT7 1819 aa21.76■■□□□ 1.07
TMED1-206ENST00000591157 C4BP0C0L5 1744 aa21.75■■□□□ 1.07
TMED1-206ENST00000591157 TJP1Q07157 1748 aa21.75■■□□□ 1.07
TMED1-206ENST00000591157 APAF1O14727 1248 aa21.75■■□□□ 1.07
TMED1-206ENST00000591157 ITPK1Q13572 414 aa21.75■■□□□ 1.07
TMED1-206ENST00000591157 STK32BQ9NY57 414 aa21.75■■□□□ 1.07
TMED1-206ENST00000591157 ATP6V1AP38606 617 aa21.74■■□□□ 1.07
TMED1-206ENST00000591157 FAM9BQ8IZU0 186 aa21.74■■□□□ 1.07
TMED1-206ENST00000591157 COL5A3P25940 1745 aaPredicted RBP21.74■■□□□ 1.07
TMED1-206ENST00000591157 CICQ96RK0 1608 aaPredicted RBP21.73■■□□□ 1.07
TMED1-206ENST00000591157 SENP3-EIF4A1A0A087X0R7 540 aa21.73■■□□□ 1.07
TMED1-206ENST00000591157 SLC15A2Q16348 729 aa21.73■■□□□ 1.07
TMED1-206ENST00000591157 LINC00116Q8NCU8 138 aa21.73■■□□□ 1.07
TMED1-206ENST00000591157 AKT1S1Q96B36 256 aa21.73■■□□□ 1.07
TMED1-206ENST00000591157 LMOD3Q0VAK6 560 aa21.72■■□□□ 1.07
TMED1-206ENST00000591157 TRIM35Q9UPQ4 493 aa21.72■■□□□ 1.07
TMED1-206ENST00000591157 BTBD11A6QL63 1104 aa21.71■■□□□ 1.07
TMED1-206ENST00000591157 CCER2I3L3R5 266 aa21.71■■□□□ 1.07
TMED1-206ENST00000591157 KCNQ3O43525 872 aa21.71■■□□□ 1.07
TMED1-206ENST00000591157 ZNF790Q6PG37 636 aa21.71■■□□□ 1.07
TMED1-206ENST00000591157 TTC5Q8N0Z6 440 aa21.71■■□□□ 1.07
TMED1-206ENST00000591157 MIER1Q8N108 512 aa21.71■■□□□ 1.07
TMED1-206ENST00000591157 KDM3BQ7LBC6 1761 aa21.71■■□□□ 1.07
TMED1-206ENST00000591157 QSER1Q2KHR3 1735 aa21.7■■□□□ 1.06
TMED1-206ENST00000591157 CASZ1Q86V15 1759 aa21.7■■□□□ 1.06
TMED1-206ENST00000591157 TAF7Q15545 349 aaPredicted RBP21.69■■□□□ 1.06
TMED1-206ENST00000591157 ZNF496Q96IT1 587 aaPredicted RBP21.68■■□□□ 1.06
TMED1-206ENST00000591157 PDGFDQ9GZP0 370 aaPredicted RBP21.68■■□□□ 1.06
TMED1-206ENST00000591157 MIS18AQ9NYP9 233 aa21.68■■□□□ 1.06
TMED1-206ENST00000591157 UBR3Q6ZT12 1888 aa21.68■■□□□ 1.06
TMED1-206ENST00000591157 DNAJC10Q8IXB1 793 aa21.67■■□□□ 1.06
TMED1-206ENST00000591157 HEG1Q9ULI3 1381 aa21.66■■□□□ 1.06
TMED1-206ENST00000591157 AK7Q96M32 723 aa21.66■■□□□ 1.06
TMED1-206ENST00000591157 TFCP2L1Q9NZI6 479 aa21.66■■□□□ 1.06
TMED1-206ENST00000591157 MYH14Q7Z406 1995 aaKnown RBP21.65■■□□□ 1.06
TMED1-206ENST00000591157 PNPLA7Q6ZV29 1317 aa21.65■■□□□ 1.06
TMED1-206ENST00000591157 AMIGO3Q86WK7 504 aa21.65■■□□□ 1.06
TMED1-206ENST00000591157 FMNL2Q96PY5 1086 aa21.64■■□□□ 1.05
TMED1-206ENST00000591157 CNTNAP4Q9C0A0 1308 aa21.63■■□□□ 1.05
TMED1-206ENST00000591157 SMIM5Q71RC9 77 aa21.63■■□□□ 1.05
TMED1-206ENST00000591157 GNPATO15228 680 aa21.62■■□□□ 1.05
TMED1-206ENST00000591157 HMGB2P26583 209 aaKnown RBP21.62■■□□□ 1.05
TMED1-206ENST00000591157 VSIG10Q8N0Z9 540 aa21.62■■□□□ 1.05
TMED1-206ENST00000591157 TSPYL4Q9UJ04 414 aa21.62■■□□□ 1.05
TMED1-206ENST00000591157 PHF14O94880 888 aa21.61■■□□□ 1.05
TMED1-206ENST00000591157 CRKLP46109 303 aaKnown RBP21.61■■□□□ 1.05
TMED1-206ENST00000591157 CYP19A1P11511 503 aaPredicted RBP21.6■■□□□ 1.05
TMED1-206ENST00000591157 SALL2Q9Y467 1007 aaPredicted RBP21.6■■□□□ 1.05
TMED1-206ENST00000591157 LAS1LQ9Y4W2 734 aaKnown RBP21.6■■□□□ 1.05
TMED1-206ENST00000591157 LAMB4A4D0S4 1761 aa21.59■■□□□ 1.05
TMED1-206ENST00000591157 PRAMEF22A3QJZ6 481 aa21.59■■□□□ 1.05
TMED1-206ENST00000591157 RC3H1Q5TC82 1133 aaKnown RBP21.59■■□□□ 1.05
TMED1-206ENST00000591157 COL23A1Q86Y22 540 aaPredicted RBP21.59■■□□□ 1.05
TMED1-206ENST00000591157 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.58■■□□□ 1.05
TMED1-206ENST00000591157 ZBTB7AO95365 584 aa21.58■■□□□ 1.05
TMED1-206ENST00000591157 EIF4A1P60842 406 aaKnown RBP21.58■■□□□ 1.05
TMED1-206ENST00000591157 INTS5Q6P9B9 1019 aaKnown RBP21.58■■□□□ 1.05
TMED1-206ENST00000591157 CHL1O00533 1208 aa21.57■■□□□ 1.04
TMED1-206ENST00000591157 MSH5O43196 834 aa21.57■■□□□ 1.04
TMED1-206ENST00000591157 CCDC27Q2M243 656 aa21.57■■□□□ 1.04
TMED1-206ENST00000591157 CCDC87Q9NVE4 849 aa21.57■■□□□ 1.04
TMED1-206ENST00000591157 C4AP0C0L4 1744 aa21.57■■□□□ 1.04
TMED1-206ENST00000591157 LRP5O75197 1615 aa21.56■■□□□ 1.04
TMED1-206ENST00000591157 SNRPA1P09661 255 aaKnown RBP21.56■■□□□ 1.04
TMED1-206ENST00000591157 SSFA2P28290 1259 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms