RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TNMDQ9H2S6 317 aa20.41■□□□□ 0.86
SMARCA4-215ENST00000590574 AMOTL2Q9Y2J4 779 aa20.41■□□□□ 0.86
SMARCA4-215ENST00000590574 RRP9O43818 475 aaKnown RBP20.41■□□□□ 0.86
SMARCA4-215ENST00000590574 PPP6R1Q9UPN7 881 aa20.41■□□□□ 0.86
SMARCA4-215ENST00000590574 RIMS2Q9UQ26 1411 aa20.41■□□□□ 0.86
SMARCA4-215ENST00000590574 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
SMARCA4-215ENST00000590574 SYNE3Q6ZMZ3 975 aa20.4■□□□□ 0.86
SMARCA4-215ENST00000590574 DDX54Q8TDD1 881 aaKnown RBP20.4■□□□□ 0.86
SMARCA4-215ENST00000590574 CLCN1P35523 988 aa20.4■□□□□ 0.86
SMARCA4-215ENST00000590574 NPATQ14207 1427 aa20.4■□□□□ 0.86
SMARCA4-215ENST00000590574 SBNO2Q9Y2G9 1366 aa20.4■□□□□ 0.86
SMARCA4-215ENST00000590574 EVA1CP58658 441 aa20.4■□□□□ 0.86
SMARCA4-215ENST00000590574 XPCQ01831 940 aaPredicted RBP20.4■□□□□ 0.86
SMARCA4-215ENST00000590574 RALYLQ86SE5 291 aaKnown RBP20.39■□□□□ 0.86
SMARCA4-215ENST00000590574 SDF4Q9BRK5 362 aa20.39■□□□□ 0.86
SMARCA4-215ENST00000590574 HMGN5P82970 282 aaKnown RBP20.39■□□□□ 0.85
SMARCA4-215ENST00000590574 DNAAF4Q8WXU2 420 aa20.39■□□□□ 0.85
SMARCA4-215ENST00000590574 NCKAP5LQ9HCH0 1330 aa20.39■□□□□ 0.85
SMARCA4-215ENST00000590574 PLXNC1O60486 1568 aa20.38■□□□□ 0.85
SMARCA4-215ENST00000590574 TPD52L1Q16890 204 aaPredicted RBP20.38■□□□□ 0.85
SMARCA4-215ENST00000590574 NFXL1Q6ZNB6 911 aa20.38■□□□□ 0.85
SMARCA4-215ENST00000590574 SPG7Q9UQ90 795 aa20.38■□□□□ 0.85
SMARCA4-215ENST00000590574 CCDC183Q5T5S1 534 aa20.38■□□□□ 0.85
SMARCA4-215ENST00000590574 SPATA32Q96LK8 384 aa20.38■□□□□ 0.85
SMARCA4-215ENST00000590574 IQGAP3Q86VI3 1631 aa20.38■□□□□ 0.85
SMARCA4-215ENST00000590574 KINO60870 393 aaKnown RBP20.38■□□□□ 0.85
SMARCA4-215ENST00000590574 PPP1R42Q7Z4L9 355 aa20.37■□□□□ 0.85
SMARCA4-215ENST00000590574 FERMT3Q86UX7 667 aa20.37■□□□□ 0.85
SMARCA4-215ENST00000590574 NAT10Q9H0A0 1025 aaKnown RBP20.37■□□□□ 0.85
SMARCA4-215ENST00000590574 LIMCH1Q9UPQ0 1083 aa20.37■□□□□ 0.85
SMARCA4-215ENST00000590574 IL13P35225 146 aa20.37■□□□□ 0.85
SMARCA4-215ENST00000590574 TULP1O00294 542 aaPredicted RBP20.37■□□□□ 0.85
SMARCA4-215ENST00000590574 ESYT1Q9BSJ8 1104 aa20.37■□□□□ 0.85
SMARCA4-215ENST00000590574 HOMER1Q86YM7 354 aa20.36■□□□□ 0.85
SMARCA4-215ENST00000590574 RASSF8Q8NHQ8 419 aa20.36■□□□□ 0.85
SMARCA4-215ENST00000590574 NUP62CLQ9H1M0 184 aa20.36■□□□□ 0.85
SMARCA4-215ENST00000590574 TATP17735 454 aaPredicted RBP20.36■□□□□ 0.85
SMARCA4-215ENST00000590574 USP26Q9BXU7 913 aa20.36■□□□□ 0.85
SMARCA4-215ENST00000590574 MYOM2P54296 1465 aa20.35■□□□□ 0.85
SMARCA4-215ENST00000590574 ATF3P18847 181 aa20.35■□□□□ 0.85
SMARCA4-215ENST00000590574 AKAP17AQ02040 695 aaKnown RBP20.35■□□□□ 0.85
SMARCA4-215ENST00000590574 MPRIPQ6WCQ1 1025 aa20.35■□□□□ 0.85
SMARCA4-215ENST00000590574 ZGPATQ8N5A5 531 aaKnown RBP20.35■□□□□ 0.85
SMARCA4-215ENST00000590574 MSH6P52701 1360 aa20.35■□□□□ 0.85
SMARCA4-215ENST00000590574 CAMK4Q16566 473 aa20.35■□□□□ 0.85
SMARCA4-215ENST00000590574 MTHFSDQ2M296 383 aaKnown RBP20.34■□□□□ 0.85
SMARCA4-215ENST00000590574 OTUD7AQ8TE49 926 aaPredicted RBP20.34■□□□□ 0.85
SMARCA4-215ENST00000590574 CFAP65Q6ZU64 1925 aaKnown RBP20.34■□□□□ 0.85
SMARCA4-215ENST00000590574 FOXO3O43524 673 aa20.34■□□□□ 0.85
SMARCA4-215ENST00000590574 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
SMARCA4-215ENST00000590574 BOLA2Q9H3K6 86 aa20.34■□□□□ 0.85
SMARCA4-215ENST00000590574 ZNF396Q96N95 335 aaPredicted RBP20.34■□□□□ 0.85
SMARCA4-215ENST00000590574 KDM4AO75164 1064 aa20.33■□□□□ 0.85
SMARCA4-215ENST00000590574 PLEKHF1Q96S99 279 aa20.33■□□□□ 0.85
SMARCA4-215ENST00000590574 LRSAM1Q6UWE0 723 aa20.33■□□□□ 0.85
SMARCA4-215ENST00000590574 RRAGDQ9NQL2 400 aaPredicted RBP20.33■□□□□ 0.85
SMARCA4-215ENST00000590574 ZMYM3Q14202 1370 aa20.33■□□□□ 0.84
SMARCA4-215ENST00000590574 CEBPAP49715 358 aaPredicted RBP20.33■□□□□ 0.84
SMARCA4-215ENST00000590574 CCDC8Q9H0W5 538 aaPredicted RBP20.33■□□□□ 0.84
SMARCA4-215ENST00000590574 ZNF771Q7L3S4 317 aaPredicted RBP20.32■□□□□ 0.84
SMARCA4-215ENST00000590574 USP25Q9UHP3 1055 aa20.32■□□□□ 0.84
SMARCA4-215ENST00000590574 ATP8B2P98198 1209 aa20.32■□□□□ 0.84
SMARCA4-215ENST00000590574 CCAR2Q8N163 923 aaKnown RBP20.32■□□□□ 0.84
SMARCA4-215ENST00000590574 UNC13BO14795 1591 aa20.32■□□□□ 0.84
SMARCA4-215ENST00000590574 SH2B1Q9NRF2 756 aaPredicted RBP20.32■□□□□ 0.84
SMARCA4-215ENST00000590574 KCNH5Q8NCM2 988 aa20.32■□□□□ 0.84
SMARCA4-215ENST00000590574 PI4KAP2A4QPH2 592 aa20.31■□□□□ 0.84
SMARCA4-215ENST00000590574 STX6O43752 255 aa20.31■□□□□ 0.84
SMARCA4-215ENST00000590574 MAP3K11Q16584 847 aa20.31■□□□□ 0.84
SMARCA4-215ENST00000590574 PI4KAP1Q8N8J0 262 aa20.31■□□□□ 0.84
SMARCA4-215ENST00000590574 POLR1AO95602 1720 aaPredicted RBP20.31■□□□□ 0.84
SMARCA4-215ENST00000590574 RHPN1Q8TCX5 695 aa20.31■□□□□ 0.84
SMARCA4-215ENST00000590574 UHRF1BP1LA0JNW5 1464 aa20.3■□□□□ 0.84
SMARCA4-215ENST00000590574 DDX11Q96FC9 970 aa20.3■□□□□ 0.84
SMARCA4-215ENST00000590574 GJB2P29033 226 aa20.3■□□□□ 0.84
SMARCA4-215ENST00000590574 CABP4P57796 275 aa20.3■□□□□ 0.84
SMARCA4-215ENST00000590574 KRT32Q14532 448 aa20.3■□□□□ 0.84
SMARCA4-215ENST00000590574 PROSER2Q86WR7 435 aaPredicted RBP20.3■□□□□ 0.84
SMARCA4-215ENST00000590574 ME1P48163 572 aa20.3■□□□□ 0.84
SMARCA4-215ENST00000590574 FMNL2Q96PY5 1086 aa20.3■□□□□ 0.84
SMARCA4-215ENST00000590574 DBF4Q9UBU7 674 aaPredicted RBP20.3■□□□□ 0.84
SMARCA4-215ENST00000590574 SMC2O95347 1197 aa20.29■□□□□ 0.84
SMARCA4-215ENST00000590574 ANXA1P04083 346 aa20.29■□□□□ 0.84
SMARCA4-215ENST00000590574 HOOK1Q9UJC3 728 aaKnown RBP20.29■□□□□ 0.84
SMARCA4-215ENST00000590574 PRIM1P49642 420 aaKnown RBP20.29■□□□□ 0.84
SMARCA4-215ENST00000590574 STK38Q15208 465 aa20.29■□□□□ 0.84
SMARCA4-215ENST00000590574 ECHDC1Q9NTX5 307 aa20.29■□□□□ 0.84
SMARCA4-215ENST00000590574 MAP3K2Q9Y2U5 619 aa20.29■□□□□ 0.84
SMARCA4-215ENST00000590574 SHROOM2Q13796 1616 aa20.29■□□□□ 0.84
SMARCA4-215ENST00000590574 TNRQ92752 1358 aa20.29■□□□□ 0.84
SMARCA4-215ENST00000590574 TTC39AQ5SRH9 613 aa20.28■□□□□ 0.84
SMARCA4-215ENST00000590574 SYTL4Q96C24 671 aaPredicted RBP20.28■□□□□ 0.84
SMARCA4-215ENST00000590574 ANAPC15P60006 121 aa20.28■□□□□ 0.84
SMARCA4-215ENST00000590574 PHF8Q9UPP1 1060 aa20.28■□□□□ 0.84
SMARCA4-215ENST00000590574 EDC4Q6P2E9 1401 aaKnown RBP20.28■□□□□ 0.84
SMARCA4-215ENST00000590574 POGZQ7Z3K3 1410 aa20.28■□□□□ 0.84
SMARCA4-215ENST00000590574 PES1O00541 588 aaKnown RBP20.28■□□□□ 0.84
SMARCA4-215ENST00000590574 TTC21AQ8NDW8 1320 aa20.27■□□□□ 0.84
SMARCA4-215ENST00000590574 PRKCSHP14314 528 aaPredicted RBP20.27■□□□□ 0.84
SMARCA4-215ENST00000590574 GTF2E1P29083 439 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms