RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 DDX49Q9Y6V7 483 aaKnown RBP25.61■■□□□ 1.69
ZNF554-203ENST00000590116 FAM208AQ9UK61 1670 aaKnown RBP25.6■■□□□ 1.69
ZNF554-203ENST00000590116 OSBPL3Q9H4L5 887 aa25.6■■□□□ 1.69
ZNF554-203ENST00000590116 NUCB2P80303 420 aa25.59■■□□□ 1.69
ZNF554-203ENST00000590116 CHAMP1Q96JM3 812 aa25.59■■□□□ 1.69
ZNF554-203ENST00000590116 USHBP1Q8N6Y0 703 aa25.58■■□□□ 1.69
ZNF554-203ENST00000590116 GNAT3A8MTJ3 354 aa25.57■■□□□ 1.68
ZNF554-203ENST00000590116 CCDC30Q5VVM6 783 aa25.57■■□□□ 1.68
ZNF554-203ENST00000590116 ERBB4Q15303 1308 aa25.57■■□□□ 1.68
ZNF554-203ENST00000590116 XRN1Q8IZH2 1706 aaKnown RBP25.57■■□□□ 1.68
ZNF554-203ENST00000590116 CYP2E1P05181 493 aaPredicted RBP25.57■■□□□ 1.68
ZNF554-203ENST00000590116 KLHL40Q2TBA0 621 aa25.57■■□□□ 1.68
ZNF554-203ENST00000590116 LRRC37A3O60309 1634 aa25.57■■□□□ 1.68
ZNF554-203ENST00000590116 HOXC9P31274 260 aa25.56■■□□□ 1.68
ZNF554-203ENST00000590116 IL17REQ8NFR9 667 aa25.56■■□□□ 1.68
ZNF554-203ENST00000590116 LRRCC1Q9C099 1032 aa25.56■■□□□ 1.68
ZNF554-203ENST00000590116 TBX22Q9Y458 520 aa25.56■■□□□ 1.68
ZNF554-203ENST00000590116 LRRFIP2Q9Y608 721 aaKnown RBP25.55■■□□□ 1.68
ZNF554-203ENST00000590116 SALL3Q9BXA9 1300 aa25.55■■□□□ 1.68
ZNF554-203ENST00000590116 HTATSF1O43719 755 aaKnown RBP25.55■■□□□ 1.68
ZNF554-203ENST00000590116 GNAI3P08754 354 aa25.55■■□□□ 1.68
ZNF554-203ENST00000590116 NCLP19338 710 aaKnown RBP25.55■■□□□ 1.68
ZNF554-203ENST00000590116 FOXD4L5Q5VV16 416 aaPredicted RBP25.54■■□□□ 1.68
ZNF554-203ENST00000590116 FOXD4L4Q8WXT5 416 aaPredicted RBP25.54■■□□□ 1.68
ZNF554-203ENST00000590116 CWC22Q9HCG8 908 aaKnown RBP25.54■■□□□ 1.68
ZNF554-203ENST00000590116 MX1P20591 662 aa25.54■■□□□ 1.68
ZNF554-203ENST00000590116 RILPL2Q969X0 211 aa25.54■■□□□ 1.68
ZNF554-203ENST00000590116 NWD1Q149M9 1564 aa25.53■■□□□ 1.68
ZNF554-203ENST00000590116 TUBGCP6Q96RT7 1819 aa25.53■■□□□ 1.68
ZNF554-203ENST00000590116 C14orf37Q86TY3 774 aa25.53■■□□□ 1.68
ZNF554-203ENST00000590116 PALD1Q9ULE6 856 aa25.53■■□□□ 1.68
ZNF554-203ENST00000590116 ZDHHC9Q9Y397 364 aa25.53■■□□□ 1.68
ZNF554-203ENST00000590116 MARF1Q9Y4F3 1742 aaKnown RBP25.52■■□□□ 1.68
ZNF554-203ENST00000590116 TRIM6-TRIM34B2RNG4 842 aa25.52■■□□□ 1.68
ZNF554-203ENST00000590116 CLCN1P35523 988 aa25.52■■□□□ 1.68
ZNF554-203ENST00000590116 NOL8Q76FK4 1167 aaKnown RBP25.52■■□□□ 1.68
ZNF554-203ENST00000590116 NEK4P51957 841 aa25.52■■□□□ 1.68
ZNF554-203ENST00000590116 CAVIN1Q6NZI2 390 aaKnown RBP25.52■■□□□ 1.68
ZNF554-203ENST00000590116 ESYT1Q9BSJ8 1104 aa25.52■■□□□ 1.68
ZNF554-203ENST00000590116 MAP3K5Q99683 1374 aa25.51■■□□□ 1.67
ZNF554-203ENST00000590116 UNC5CLQ8IV45 518 aa25.51■■□□□ 1.67
ZNF554-203ENST00000590116 LMBRD1Q9NUN5 540 aa25.51■■□□□ 1.67
ZNF554-203ENST00000590116 ATP8B2P98198 1209 aa25.51■■□□□ 1.67
ZNF554-203ENST00000590116 PHAXQ9H814 394 aaKnown RBP25.51■■□□□ 1.67
ZNF554-203ENST00000590116 SLIT1O75093 1534 aa25.5■■□□□ 1.67
ZNF554-203ENST00000590116 ABTB2Q8N961 1025 aa25.5■■□□□ 1.67
ZNF554-203ENST00000590116 IL1RAPL2Q9NP60 686 aa25.5■■□□□ 1.67
ZNF554-203ENST00000590116 IBTKQ9P2D0 1353 aaPredicted RBP25.5■■□□□ 1.67
ZNF554-203ENST00000590116 KCNA6P17658 529 aa25.49■■□□□ 1.67
ZNF554-203ENST00000590116 TRIM44Q96DX7 344 aaPredicted RBP25.49■■□□□ 1.67
ZNF554-203ENST00000590116 ARHGAP23Q9P227 1491 aa25.49■■□□□ 1.67
ZNF554-203ENST00000590116 ANO2Q9NQ90 1003 aa25.48■■□□□ 1.67
ZNF554-203ENST00000590116 ESPNB1AK53 854 aa25.48■■□□□ 1.67
ZNF554-203ENST00000590116 PRPF40AO75400 957 aaKnown RBP25.47■■□□□ 1.67
ZNF554-203ENST00000590116 TAF7Q15545 349 aaPredicted RBP25.47■■□□□ 1.67
ZNF554-203ENST00000590116 USP44Q9H0E7 712 aa25.47■■□□□ 1.67
ZNF554-203ENST00000590116 NASPP49321 788 aaPredicted RBP25.47■■□□□ 1.67
ZNF554-203ENST00000590116 TMX3Q96JJ7 454 aa25.47■■□□□ 1.67
ZNF554-203ENST00000590116 RBM27Q9P2N5 1060 aaKnown RBP25.47■■□□□ 1.67
ZNF554-203ENST00000590116 CHMLP26374 656 aa25.46■■□□□ 1.67
ZNF554-203ENST00000590116 HDGFL1Q5TGJ6 251 aa25.46■■□□□ 1.67
ZNF554-203ENST00000590116 IL25Q9H293 177 aa25.46■■□□□ 1.67
ZNF554-203ENST00000590116 RBM33Q96EV2 1170 aaKnown RBP25.46■■□□□ 1.67
ZNF554-203ENST00000590116 SETD1BQ9UPS6 1966 aaKnown RBP25.45■■□□□ 1.67
ZNF554-203ENST00000590116 MAP4K4O95819 1239 aaPredicted RBP25.45■■□□□ 1.67
ZNF554-203ENST00000590116 NUTM1Q86Y26 1132 aa25.45■■□□□ 1.67
ZNF554-203ENST00000590116 NAP1L5Q96NT1 182 aaPredicted RBP25.45■■□□□ 1.67
ZNF554-203ENST00000590116 UBTFL1P0CB47 393 aaPredicted RBP25.45■■□□□ 1.66
ZNF554-203ENST00000590116 ZSCAN23Q3MJ62 389 aa25.45■■□□□ 1.66
ZNF554-203ENST00000590116 EIF2S2P20042 333 aaKnown RBP25.44■■□□□ 1.66
ZNF554-203ENST00000590116 GPT2Q8TD30 523 aa25.44■■□□□ 1.66
ZNF554-203ENST00000590116 ZBTB7CA1YPR0 619 aa25.44■■□□□ 1.66
ZNF554-203ENST00000590116 CACNA1FO60840 1977 aa25.43■■□□□ 1.66
ZNF554-203ENST00000590116 MCCP23508 829 aa25.43■■□□□ 1.66
ZNF554-203ENST00000590116 THEMISQ8N1K5 641 aaPredicted RBP25.43■■□□□ 1.66
ZNF554-203ENST00000590116 UPF3BQ9BZI7 483 aaKnown RBP25.42■■□□□ 1.66
ZNF554-203ENST00000590116 SOS1Q07889 1333 aaPredicted RBP25.42■■□□□ 1.66
ZNF554-203ENST00000590116 ANKARQ7Z5J8 1434 aa25.42■■□□□ 1.66
ZNF554-203ENST00000590116 STAP2Q9UGK3 403 aa25.42■■□□□ 1.66
ZNF554-203ENST00000590116 PLEKHG5O94827 1062 aa25.41■■□□□ 1.66
ZNF554-203ENST00000590116 SRCIN1Q9C0H9 1055 aa25.41■■□□□ 1.66
ZNF554-203ENST00000590116 ZNF445P59923 1031 aa25.41■■□□□ 1.66
ZNF554-203ENST00000590116 NSFL1CQ9UNZ2 370 aaKnown RBP25.41■■□□□ 1.66
ZNF554-203ENST00000590116 N4BP2Q86UW6 1770 aaPredicted RBP25.41■■□□□ 1.66
ZNF554-203ENST00000590116 BABAM1Q9NWV8 329 aa25.4■■□□□ 1.66
ZNF554-203ENST00000590116 PXDNLA1KZ92 1463 aa25.4■■□□□ 1.66
ZNF554-203ENST00000590116 ANXA1P04083 346 aa25.4■■□□□ 1.66
ZNF554-203ENST00000590116 PPP1R42Q7Z4L9 355 aa25.4■■□□□ 1.66
ZNF554-203ENST00000590116 LGR6Q9HBX8 967 aa25.4■■□□□ 1.66
ZNF554-203ENST00000590116 LTN1O94822 1766 aa25.39■■□□□ 1.66
ZNF554-203ENST00000590116 CCDC173Q0VFZ6 552 aa25.39■■□□□ 1.66
ZNF554-203ENST00000590116 KCNQ3O43525 872 aa25.39■■□□□ 1.65
ZNF554-203ENST00000590116 SURF6O75683 361 aaKnown RBP25.39■■□□□ 1.65
ZNF554-203ENST00000590116 MCM2P49736 904 aa25.39■■□□□ 1.65
ZNF554-203ENST00000590116 ANP32BQ92688 251 aaKnown RBP25.38■■□□□ 1.65
ZNF554-203ENST00000590116 SSH3Q8TE77 659 aa25.38■■□□□ 1.65
ZNF554-203ENST00000590116 CHPF2Q9P2E5 772 aa25.38■■□□□ 1.65
ZNF554-203ENST00000590116 NBPF7P0C2Y1 421 aaPredicted RBP25.37■■□□□ 1.65
ZNF554-203ENST00000590116 RBSNQ9H1K0 784 aa25.37■■□□□ 1.65
ZNF554-203ENST00000590116 PRIM1P49642 420 aaKnown RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 200.4 ms