RNA–Protein interactions for RNA: ENST00000590062.1

GPATCH1-202, Transcript of G-patch domain containing 1, humanhuman

TSL 2

Gene GPATCH1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-202ENST00000590062 RIPK4P57078 832 aa16.07■□□□□ 0.16
GPATCH1-202ENST00000590062 CABP4P57796 275 aa16.07■□□□□ 0.16
GPATCH1-202ENST00000590062 PIGBQ92521 554 aa16.07■□□□□ 0.16
GPATCH1-202ENST00000590062 PAPPAQ13219 1627 aa16.07■□□□□ 0.16
GPATCH1-202ENST00000590062 EZH2Q15910 746 aaKnown RBP16.06■□□□□ 0.16
GPATCH1-202ENST00000590062 TRIM35Q9UPQ4 493 aa16.06■□□□□ 0.16
GPATCH1-202ENST00000590062 CCDC27Q2M243 656 aa16.05■□□□□ 0.16
GPATCH1-202ENST00000590062 MCM10Q7L590 875 aa16.05■□□□□ 0.16
GPATCH1-202ENST00000590062 SMARCC1Q92922 1105 aaPredicted RBP16.05■□□□□ 0.16
GPATCH1-202ENST00000590062 CAMKK2Q96RR4 588 aa16.05■□□□□ 0.16
GPATCH1-202ENST00000590062 RRP7AQ9Y3A4 280 aaKnown RBP16.05■□□□□ 0.16
GPATCH1-202ENST00000590062 NUP188Q5SRE5 1749 aa16.05■□□□□ 0.16
GPATCH1-202ENST00000590062 DCTN1Q14203 1278 aa16.04■□□□□ 0.16
GPATCH1-202ENST00000590062 NGEFQ8N5V2 710 aa16.04■□□□□ 0.16
GPATCH1-202ENST00000590062 NFATC2IPQ8NCF5 419 aa16.04■□□□□ 0.16
GPATCH1-202ENST00000590062 LY75O60449 1722 aa16.04■□□□□ 0.16
GPATCH1-202ENST00000590062 PALLDQ8WX93 1383 aa16.03■□□□□ 0.16
GPATCH1-202ENST00000590062 TEFQ10587 303 aa16.03■□□□□ 0.16
GPATCH1-202ENST00000590062 NEUROD2Q15784 382 aa16.02■□□□□ 0.16
GPATCH1-202ENST00000590062 TXNRD1Q16881 649 aa16.02■□□□□ 0.16
GPATCH1-202ENST00000590062 ATG3Q9NT62 314 aa16.02■□□□□ 0.16
GPATCH1-202ENST00000590062 ZNF831Q5JPB2 1677 aa16.02■□□□□ 0.15
GPATCH1-202ENST00000590062 UBR2Q8IWV8 1755 aa16.01■□□□□ 0.15
GPATCH1-202ENST00000590062 HMGB2P26583 209 aaKnown RBP16.01■□□□□ 0.15
GPATCH1-202ENST00000590062 SLC27A3Q5K4L6 730 aa16.01■□□□□ 0.15
GPATCH1-202ENST00000590062 THUMPD2Q9BTF0 503 aaKnown RBP16.01■□□□□ 0.15
GPATCH1-202ENST00000590062 ASAP1Q9ULH1 1129 aa16.01■□□□□ 0.15
GPATCH1-202ENST00000590062 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
GPATCH1-202ENST00000590062 KCPQ6ZWJ8 1503 aa16■□□□□ 0.15
GPATCH1-202ENST00000590062 BABAM1Q9NWV8 329 aa16■□□□□ 0.15
GPATCH1-202ENST00000590062 TAF7Q15545 349 aaPredicted RBP15.99■□□□□ 0.15
GPATCH1-202ENST00000590062 NBPF14Q5TI25 921 aa15.99■□□□□ 0.15
GPATCH1-202ENST00000590062 WWC1Q8IX03 1113 aa15.99■□□□□ 0.15
GPATCH1-202ENST00000590062 CCNL1Q9UK58 526 aaPredicted RBP15.99■□□□□ 0.15
GPATCH1-202ENST00000590062 KDM3BQ7LBC6 1761 aa15.99■□□□□ 0.15
GPATCH1-202ENST00000590062 CALD1Q05682 793 aaKnown RBP15.98■□□□□ 0.15
GPATCH1-202ENST00000590062 PROM2Q8N271 834 aa15.98■□□□□ 0.15
GPATCH1-202ENST00000590062 ZNF521Q96K83 1311 aa15.97■□□□□ 0.15
GPATCH1-202ENST00000590062 BTBD11A6QL63 1104 aa15.97■□□□□ 0.15
GPATCH1-202ENST00000590062 ZNF790Q6PG37 636 aa15.97■□□□□ 0.15
GPATCH1-202ENST00000590062 C5P01031 1676 aa15.97■□□□□ 0.15
GPATCH1-202ENST00000590062 LOC102724428A0A0B4J2F2 783 aa15.96■□□□□ 0.15
GPATCH1-202ENST00000590062 SIK1P57059 783 aa15.96■□□□□ 0.15
GPATCH1-202ENST00000590062 SLC39A6Q13433 755 aa15.96■□□□□ 0.15
GPATCH1-202ENST00000590062 TTC5Q8N0Z6 440 aa15.96■□□□□ 0.15
GPATCH1-202ENST00000590062 IL16Q14005 1332 aa15.95■□□□□ 0.14
GPATCH1-202ENST00000590062 CHL1O00533 1208 aa15.95■□□□□ 0.14
GPATCH1-202ENST00000590062 ZNF853P0CG23 659 aa15.95■□□□□ 0.14
GPATCH1-202ENST00000590062 WDR63Q8IWG1 891 aa15.95■□□□□ 0.14
GPATCH1-202ENST00000590062 CFAP44Q96MT7 982 aa15.95■□□□□ 0.14
GPATCH1-202ENST00000590062 RBM42Q9BTD8 480 aaKnown RBP15.95■□□□□ 0.14
GPATCH1-202ENST00000590062 LRRC4BQ9NT99 713 aa15.95■□□□□ 0.14
GPATCH1-202ENST00000590062 IFT57Q9NWB7 429 aa15.95■□□□□ 0.14
GPATCH1-202ENST00000590062 STK32BQ9NY57 414 aa15.95■□□□□ 0.14
GPATCH1-202ENST00000590062 VSIG10Q8N0Z9 540 aa15.94■□□□□ 0.14
GPATCH1-202ENST00000590062 SLC4A9Q96Q91 983 aa15.94■□□□□ 0.14
GPATCH1-202ENST00000590062 TAF1LQ8IZX4 1826 aa15.94■□□□□ 0.14
GPATCH1-202ENST00000590062 TJP1Q07157 1748 aa15.94■□□□□ 0.14
GPATCH1-202ENST00000590062 HEG1Q9ULI3 1381 aa15.93■□□□□ 0.14
GPATCH1-202ENST00000590062 KCNQ3O43525 872 aa15.93■□□□□ 0.14
GPATCH1-202ENST00000590062 ZNF496Q96IT1 587 aaPredicted RBP15.93■□□□□ 0.14
GPATCH1-202ENST00000590062 COL5A3P25940 1745 aaPredicted RBP15.93■□□□□ 0.14
GPATCH1-202ENST00000590062 SENP3-EIF4A1A0A087X0R7 540 aa15.92■□□□□ 0.14
GPATCH1-202ENST00000590062 PTCD1O75127 700 aaKnown RBP15.92■□□□□ 0.14
GPATCH1-202ENST00000590062 ATP6V1AP38606 617 aa15.92■□□□□ 0.14
GPATCH1-202ENST00000590062 GNAI1P63096 354 aa15.92■□□□□ 0.14
GPATCH1-202ENST00000590062 FMNL2Q96PY5 1086 aa15.92■□□□□ 0.14
GPATCH1-202ENST00000590062 TSPYL4Q9UJ04 414 aa15.92■□□□□ 0.14
GPATCH1-202ENST00000590062 C4BP0C0L5 1744 aa15.91■□□□□ 0.14
GPATCH1-202ENST00000590062 KCNQ4P56696 695 aa15.91■□□□□ 0.14
GPATCH1-202ENST00000590062 EIF4A1P60842 406 aaKnown RBP15.91■□□□□ 0.14
GPATCH1-202ENST00000590062 ITPK1Q13572 414 aa15.91■□□□□ 0.14
GPATCH1-202ENST00000590062 ANO8Q9HCE9 1232 aaPredicted RBP15.91■□□□□ 0.14
GPATCH1-202ENST00000590062 MIS18AQ9NYP9 233 aa15.91■□□□□ 0.14
GPATCH1-202ENST00000590062 R3HDM1Q15032 1099 aaKnown RBP15.9■□□□□ 0.14
GPATCH1-202ENST00000590062 SLC15A2Q16348 729 aa15.9■□□□□ 0.14
GPATCH1-202ENST00000590062 MBIPQ9NS73 344 aa15.9■□□□□ 0.14
GPATCH1-202ENST00000590062 SALL2Q9Y467 1007 aaPredicted RBP15.9■□□□□ 0.14
GPATCH1-202ENST00000590062 QSER1Q2KHR3 1735 aa15.89■□□□□ 0.13
GPATCH1-202ENST00000590062 AK7Q96M32 723 aa15.89■□□□□ 0.13
GPATCH1-202ENST00000590062 CNTNAP4Q9C0A0 1308 aa15.89■□□□□ 0.13
GPATCH1-202ENST00000590062 LAMB4A4D0S4 1761 aa15.88■□□□□ 0.13
GPATCH1-202ENST00000590062 PSDA5PKW4 1024 aaPredicted RBP15.88■□□□□ 0.13
GPATCH1-202ENST00000590062 LINC00116Q8NCU8 138 aa15.88■□□□□ 0.13
GPATCH1-202ENST00000590062 AKT1S1Q96B36 256 aa15.88■□□□□ 0.13
GPATCH1-202ENST00000590062 GIGYF1O75420 1035 aaPredicted RBP15.87■□□□□ 0.13
GPATCH1-202ENST00000590062 SNRPA1P09661 255 aaKnown RBP15.87■□□□□ 0.13
GPATCH1-202ENST00000590062 ZNF827Q17R98 1081 aa15.87■□□□□ 0.13
GPATCH1-202ENST00000590062 DNAJC10Q8IXB1 793 aa15.87■□□□□ 0.13
GPATCH1-202ENST00000590062 TEX13AQ9BXU3 409 aaPredicted RBP15.87■□□□□ 0.13
GPATCH1-202ENST00000590062 TFCP2L1Q9NZI6 479 aa15.87■□□□□ 0.13
GPATCH1-202ENST00000590062 LAS1LQ9Y4W2 734 aaKnown RBP15.87■□□□□ 0.13
GPATCH1-202ENST00000590062 CYP19A1P11511 503 aaPredicted RBP15.86■□□□□ 0.13
GPATCH1-202ENST00000590062 HNRNPUQ00839 825 aaKnown RBP eCLIP15.86■□□□□ 0.13
GPATCH1-202ENST00000590062 RC3H1Q5TC82 1133 aaKnown RBP15.86■□□□□ 0.13
GPATCH1-202ENST00000590062 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
GPATCH1-202ENST00000590062 TUBGCP6Q96RT7 1819 aa15.86■□□□□ 0.13
GPATCH1-202ENST00000590062 FANCIQ9NVI1 1328 aa15.86■□□□□ 0.13
GPATCH1-202ENST00000590062 HOXB7P09629 217 aa15.85■□□□□ 0.13
GPATCH1-202ENST00000590062 GOLGA2Q08379 1002 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms