RNA–Protein interactions for RNA: ENST00000589759.1

ATP6V0A1-223, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-223	ENST00000589759	PTPRG	P23470	1445 aa		6.21	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	IQGAP2	Q13576	1575 aa		6.21	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	DIP2B	Q9P265	1576 aa		6.21	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	EIF2AK4	Q9P2K8	1649 aa	Known RBP	6.21	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	PRDM15	P57071	1507 aa	Predicted RBP	6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	PLEKHG2	Q9H7P9	1386 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	CDC42BPA	Q5VT25	1732 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	SYCE3	A1L190	88 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	ZNF853	P0CG23	659 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	TDO2	P48775	406 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	LSM11	P83369	360 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	BMS1	Q14692	1282 aa	Known RBP	6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	RABEP1	Q15276	862 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	TTC31	Q49AM3	519 aa	Predicted RBP	6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	TEX35	Q5T0J7	233 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	EP400NL	Q6ZTU2	488 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	NFATC2IP	Q8NCF5	419 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	GAS2L2	Q8NHY3	880 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	KIF2C	Q99661	725 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	CWC22	Q9HCG8	908 aa	Known RBP	6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	USP25	Q9UHP3	1055 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	KNSTRN	Q9Y448	316 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	RNF17	Q9BXT8	1623 aa	Known RBP	6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	CCDC141	Q6ZP82	1450 aa		6.2	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	TSPOAP1	O95153	1857 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	CARMIL2	Q6F5E8	1435 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	ANKRD50	Q9ULJ7	1429 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	CCDC189	A1A4V9	331 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	IRF6	O14896	467 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	PPP1R12A	O14974	1030 aa	Predicted RBP	6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	PER1	O15534	1290 aa	Predicted RBP	6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	PYGB	P11216	843 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	SSR1	P43307	286 aa	Known RBP	6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	TPM4	P67936	248 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	SYT10	Q6XYQ8	523 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	SRL	Q86TD4	932 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	PROM2	Q8N271	834 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	TRERF1	Q96PN7	1200 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	POLR3GL	Q9BT43	218 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	DEF6	Q9H4E7	631 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	TTC12	Q9H892	705 aa	Predicted RBP	6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	RBM27	Q9P2N5	1060 aa	Known RBP	6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	SUFU	Q9UMX1	484 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	BOLA1	Q9Y3E2	137 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	SH3BP1	Q9Y3L3	701 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759		V9GYY5	206 aa	Predicted RBP	6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	MYOM1	P52179	1685 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	SHPRH	Q149N8	1683 aa		6.19	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	CCDC196	A0A1B0GTZ2	297 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	CP	P00450	1065 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	ATP6V1A	P38606	617 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	MAGEA9	P43362	315 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	RBM6	P78332	1123 aa	Known RBP	6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	GPS2	Q13227	327 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	ZKSCAN8	Q15776	578 aa	Predicted RBP	6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	C11orf91	Q3C1V1	193 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	KMT5B	Q4FZB7	885 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	MCTP2	Q6DN12	878 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	C10orf67	Q8IYJ2	551 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	C17orf53	Q8N3J3	647 aa	Predicted RBP	6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	CCDC112	Q8NEF3	446 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	GOLGA5	Q8TBA6	731 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	CEP89	Q96ST8	783 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	TACO1	Q9BSH4	297 aa	Known RBP	6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	PCDHB15	Q9Y5E8	787 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	DISP1	Q96F81	1524 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	PTPRC	P08575	1304 aa		6.18	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	HTATSF1	O43719	755 aa	Known RBP	6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	PRPF40A	O75400	957 aa	Known RBP	6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	BCAR3	O75815	825 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	ADCY5	O95622	1261 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	SRPK2	P78362	688 aa	Known RBP	6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	SEMA3F	Q13275	785 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	HDAC1	Q13547	482 aa	Predicted RBP	6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	NBPF6	Q5VWK0	638 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	NBPF5P	Q86XG9	351 aa	Predicted RBP	6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	GPATCH11	Q8N954	259 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	JMY	Q8N9B5	988 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	RNF217	Q8TC41	542 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	ERO1A	Q96HE7	468 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	SGSM3	Q96HU1	749 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	NBPF4	Q96M43	638 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	KCNF1	Q9H3M0	494 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	TMX1	Q9H3N1	280 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	PSD3	Q9NYI0	1048 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	PYCARD	Q9ULZ3	195 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	COG6	Q9Y2V7	657 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	RRP15	Q9Y3B9	282 aa	Known RBP	6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	TUBGCP6	Q96RT7	1819 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	GPRASP1	Q5JY77	1395 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	IQGAP1	P46940	1657 aa		6.17	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	MAGI3	Q5TCQ9	1506 aa		6.16	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	KLHL33	A6NCF5	533 aa		6.16	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	ATP8B1	O43520	1251 aa		6.16	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	CD2BP2	O95400	341 aa	Known RBP	6.16	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	H2AFX	P16104	143 aa	Predicted RBP	6.16	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	GYS2	P54840	703 aa		6.16	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	ZSCAN26	Q16670	478 aa		6.16	□□□□□ -1.42
ATP6V0A1-223	ENST00000589759	LRCH2	Q5VUJ6	765 aa		6.16	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms