RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 IGSF1Q8N6C5 1336 aa13.65□□□□□ -0.22
GFAP-216ENST00000589701 EIF2S2P20042 333 aaKnown RBP13.65□□□□□ -0.22
GFAP-216ENST00000589701 BRD2P25440 801 aaKnown RBP13.65□□□□□ -0.22
GFAP-216ENST00000589701 NBPF6Q5VWK0 638 aa13.65□□□□□ -0.22
GFAP-216ENST00000589701 CEP85Q6P2H3 762 aa13.65□□□□□ -0.22
GFAP-216ENST00000589701 NBPF4Q96M43 638 aa13.65□□□□□ -0.22
GFAP-216ENST00000589701 LGR6Q9HBX8 967 aa13.65□□□□□ -0.22
GFAP-216ENST00000589701 CHD2O14647 1828 aaKnown RBP13.65□□□□□ -0.22
GFAP-216ENST00000589701 KCNQ3O43525 872 aa13.65□□□□□ -0.22
GFAP-216ENST00000589701 FKBP5Q13451 457 aaPredicted RBP13.65□□□□□ -0.22
GFAP-216ENST00000589701 GCC1Q96CN9 775 aa13.65□□□□□ -0.22
GFAP-216ENST00000589701 EXOC6BQ9Y2D4 811 aa13.65□□□□□ -0.22
GFAP-216ENST00000589701 INTS3Q68E01 1043 aaKnown RBP13.64□□□□□ -0.23
GFAP-216ENST00000589701 PLEKHM2Q8IWE5 1019 aa13.64□□□□□ -0.23
GFAP-216ENST00000589701 GNAT3A8MTJ3 354 aa13.64□□□□□ -0.23
GFAP-216ENST00000589701 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
GFAP-216ENST00000589701 GZF1Q9H116 711 aaPredicted RBP13.64□□□□□ -0.23
GFAP-216ENST00000589701 NALCNQ8IZF0 1738 aa13.63□□□□□ -0.23
GFAP-216ENST00000589701 XRN1Q8IZH2 1706 aaKnown RBP13.63□□□□□ -0.23
GFAP-216ENST00000589701 PHAXQ9H814 394 aaKnown RBP13.63□□□□□ -0.23
GFAP-216ENST00000589701 BMP2KLQ5H9B9 411 aa13.63□□□□□ -0.23
GFAP-216ENST00000589701 RGPD1P0DJD0 1748 aa13.63□□□□□ -0.23
GFAP-216ENST00000589701 ARHGEF10O15013 1369 aa13.63□□□□□ -0.23
GFAP-216ENST00000589701 DCTPP1Q9H773 170 aa13.62□□□□□ -0.23
GFAP-216ENST00000589701 RTL1A6NKG5 1358 aa13.62□□□□□ -0.23
GFAP-216ENST00000589701 ATP10DQ9P241 1426 aa13.62□□□□□ -0.23
GFAP-216ENST00000589701 NCOA3Q9Y6Q9 1424 aa13.62□□□□□ -0.23
GFAP-216ENST00000589701 FMN2Q9NZ56 1722 aa13.62□□□□□ -0.23
GFAP-216ENST00000589701 HAP1P54257 671 aaPredicted RBP13.62□□□□□ -0.23
GFAP-216ENST00000589701 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
GFAP-216ENST00000589701 KIF2CQ99661 725 aa13.61□□□□□ -0.23
GFAP-216ENST00000589701 KDRP35968 1356 aa13.61□□□□□ -0.23
GFAP-216ENST00000589701 ANKRD44Q8N8A2 993 aa13.61□□□□□ -0.23
GFAP-216ENST00000589701 GAS2L2Q8NHY3 880 aa13.61□□□□□ -0.23
GFAP-216ENST00000589701 PNMA6EA0A0J9YXQ4 647 aa13.6□□□□□ -0.23
GFAP-216ENST00000589701 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
GFAP-216ENST00000589701 FLIIQ13045 1269 aa13.6□□□□□ -0.23
GFAP-216ENST00000589701 STK31Q9BXU1 1019 aa13.6□□□□□ -0.23
GFAP-216ENST00000589701 ROBO1Q9Y6N7 1651 aa13.59□□□□□ -0.23
GFAP-216ENST00000589701 PRAMEF22A3QJZ6 481 aa13.59□□□□□ -0.23
GFAP-216ENST00000589701 TULP1O00294 542 aaPredicted RBP13.59□□□□□ -0.23
GFAP-216ENST00000589701 IPO4Q8TEX9 1081 aaKnown RBP13.59□□□□□ -0.23
GFAP-216ENST00000589701 KIAA0232Q92628 1395 aa13.59□□□□□ -0.23
GFAP-216ENST00000589701 ZC3H6P61129 1189 aaKnown RBP13.58□□□□□ -0.23
GFAP-216ENST00000589701 AXIN2Q9Y2T1 843 aa13.58□□□□□ -0.23
GFAP-216ENST00000589701 HSCBQ8IWL3 235 aa13.58□□□□□ -0.24
GFAP-216ENST00000589701 SDSP20132 328 aa13.57□□□□□ -0.24
GFAP-216ENST00000589701 ZFP91Q96JP5 570 aaPredicted RBP13.57□□□□□ -0.24
GFAP-216ENST00000589701 RRAGDQ9NQL2 400 aaPredicted RBP13.57□□□□□ -0.24
GFAP-216ENST00000589701 MARF1Q9Y4F3 1742 aaKnown RBP13.57□□□□□ -0.24
GFAP-216ENST00000589701 PTPRCP08575 1304 aa13.57□□□□□ -0.24
GFAP-216ENST00000589701 TAF7Q15545 349 aaPredicted RBP13.57□□□□□ -0.24
GFAP-216ENST00000589701 TTC22Q5TAA0 569 aa13.57□□□□□ -0.24
GFAP-216ENST00000589701 HDGFL1Q5TGJ6 251 aa13.57□□□□□ -0.24
GFAP-216ENST00000589701 IL1RAPL2Q9NP60 686 aa13.57□□□□□ -0.24
GFAP-216ENST00000589701 LRRFIP2Q9Y608 721 aaKnown RBP13.57□□□□□ -0.24
GFAP-216ENST00000589701 RGPD2P0DJD1 1756 aa13.56□□□□□ -0.24
GFAP-216ENST00000589701 ANKARQ7Z5J8 1434 aa13.56□□□□□ -0.24
GFAP-216ENST00000589701 CABLES1Q8TDN4 633 aa13.56□□□□□ -0.24
GFAP-216ENST00000589701 MAP3K5Q99683 1374 aa13.56□□□□□ -0.24
GFAP-216ENST00000589701 AK9Q5TCS8 1911 aa13.56□□□□□ -0.24
GFAP-216ENST00000589701 RBM25P49756 843 aaKnown RBP13.56□□□□□ -0.24
GFAP-216ENST00000589701 GCP02774 474 aa13.55□□□□□ -0.24
GFAP-216ENST00000589701 HSP90AB1P08238 724 aaKnown RBP13.55□□□□□ -0.24
GFAP-216ENST00000589701 SLAIN2Q9P270 581 aa13.55□□□□□ -0.24
GFAP-216ENST00000589701 CHPF2Q9P2E5 772 aa13.55□□□□□ -0.24
GFAP-216ENST00000589701 CDC45O75419 566 aa13.55□□□□□ -0.24
GFAP-216ENST00000589701 MAP4K4O95819 1239 aaPredicted RBP13.55□□□□□ -0.24
GFAP-216ENST00000589701 CCDC30Q5VVM6 783 aa13.55□□□□□ -0.24
GFAP-216ENST00000589701 RPAP2Q8IXW5 612 aaPredicted RBP13.55□□□□□ -0.24
GFAP-216ENST00000589701 ZNF530Q6P9A1 599 aaPredicted RBP13.54□□□□□ -0.24
GFAP-216ENST00000589701 IP6K1Q92551 441 aa13.54□□□□□ -0.24
GFAP-216ENST00000589701 LTN1O94822 1766 aa13.54□□□□□ -0.24
GFAP-216ENST00000589701 PHLPP1O60346 1717 aa13.53□□□□□ -0.24
GFAP-216ENST00000589701 GNAI2P04899 355 aa13.53□□□□□ -0.24
GFAP-216ENST00000589701 NBPF7P0C2Y1 421 aaPredicted RBP13.53□□□□□ -0.24
GFAP-216ENST00000589701 PIP4K2AP48426 406 aaPredicted RBP13.53□□□□□ -0.24
GFAP-216ENST00000589701 USP44Q9H0E7 712 aa13.53□□□□□ -0.24
GFAP-216ENST00000589701 PROSER3Q2NL68 480 aa13.52□□□□□ -0.24
GFAP-216ENST00000589701 CADPS2Q86UW7 1296 aa13.52□□□□□ -0.24
GFAP-216ENST00000589701 C19orf44Q9H6X5 657 aa13.52□□□□□ -0.24
GFAP-216ENST00000589701 CCT4P50991 539 aaKnown RBP13.52□□□□□ -0.25
GFAP-216ENST00000589701 NUTM1Q86Y26 1132 aa13.52□□□□□ -0.25
GFAP-216ENST00000589701 PI4KAP2A4QPH2 592 aa13.51□□□□□ -0.25
GFAP-216ENST00000589701 NOL8Q76FK4 1167 aaKnown RBP13.51□□□□□ -0.25
GFAP-216ENST00000589701 UNC5CLQ8IV45 518 aa13.51□□□□□ -0.25
GFAP-216ENST00000589701 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
GFAP-216ENST00000589701 PI4KAP1Q8N8J0 262 aa13.51□□□□□ -0.25
GFAP-216ENST00000589701 RILPL2Q969X0 211 aa13.51□□□□□ -0.25
GFAP-216ENST00000589701 CHAMP1Q96JM3 812 aa13.51□□□□□ -0.25
GFAP-216ENST00000589701 BTBD11A6QL63 1104 aa13.51□□□□□ -0.25
GFAP-216ENST00000589701 ATF3P18847 181 aa13.51□□□□□ -0.25
GFAP-216ENST00000589701 TEFQ10587 303 aa13.51□□□□□ -0.25
GFAP-216ENST00000589701 MCM4P33991 863 aa13.5□□□□□ -0.25
GFAP-216ENST00000589701 PDE1AP54750 535 aa13.5□□□□□ -0.25
GFAP-216ENST00000589701 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
GFAP-216ENST00000589701 ANKRD24Q8TF21 1146 aa13.5□□□□□ -0.25
GFAP-216ENST00000589701 CHMP5Q9NZZ3 219 aa13.5□□□□□ -0.25
GFAP-216ENST00000589701 DTNBO60941 627 aa13.5□□□□□ -0.25
GFAP-216ENST00000589701 EIF4A1P60842 406 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms