RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 ONECUT3O60422 494 aaPredicted RBP22.89■■□□□ 1.25
TMED1-205ENST00000589638 RGS17Q9UGC6 210 aaPredicted RBP22.89■■□□□ 1.25
TMED1-205ENST00000589638 ERVV-2B6SEH9 535 aa22.88■■□□□ 1.25
TMED1-205ENST00000589638 BABAM1Q9NWV8 329 aa22.88■■□□□ 1.25
TMED1-205ENST00000589638 MRC1P22897 1456 aa22.87■■□□□ 1.25
TMED1-205ENST00000589638 SCN11AQ9UI33 1791 aa22.87■■□□□ 1.25
TMED1-205ENST00000589638 KCNQ3O43525 872 aa22.87■■□□□ 1.25
TMED1-205ENST00000589638 KRT24Q2M2I5 525 aa22.86■■□□□ 1.25
TMED1-205ENST00000589638 RCAN3Q9UKA8 241 aa22.86■■□□□ 1.25
TMED1-205ENST00000589638 ELL2O00472 640 aaPredicted RBP22.85■■□□□ 1.25
TMED1-205ENST00000589638 RXRBP28702 533 aa22.85■■□□□ 1.25
TMED1-205ENST00000589638 SLC39A6Q13433 755 aa22.85■■□□□ 1.25
TMED1-205ENST00000589638 C8orf58Q8NAV2 365 aa22.85■■□□□ 1.25
TMED1-205ENST00000589638 SYTL4Q96C24 671 aaPredicted RBP22.85■■□□□ 1.25
TMED1-205ENST00000589638 ACSBG1Q96GR2 724 aa22.85■■□□□ 1.25
TMED1-205ENST00000589638 TMOD3Q9NYL9 352 aa22.85■■□□□ 1.25
TMED1-205ENST00000589638 POTEAQ6S8J7 498 aa22.84■■□□□ 1.25
TMED1-205ENST00000589638 TSPYL6Q8N831 410 aa22.84■■□□□ 1.25
TMED1-205ENST00000589638 TOGARAM1Q9Y4F4 1720 aa22.84■■□□□ 1.25
TMED1-205ENST00000589638 FAM182BQ5T319 152 aa22.83■■□□□ 1.25
TMED1-205ENST00000589638 VIRMAQ69YN4 1812 aaKnown RBP22.82■■□□□ 1.24
TMED1-205ENST00000589638 PRIM1P49642 420 aaKnown RBP22.82■■□□□ 1.24
TMED1-205ENST00000589638 TWISTNBQ3B726 338 aaPredicted RBP22.82■■□□□ 1.24
TMED1-205ENST00000589638 TTC5Q8N0Z6 440 aa22.81■■□□□ 1.24
TMED1-205ENST00000589638 EIF4A1P60842 406 aaKnown RBP22.8■■□□□ 1.24
TMED1-205ENST00000589638 ZNF790Q6PG37 636 aa22.8■■□□□ 1.24
TMED1-205ENST00000589638 PIGBQ92521 554 aa22.8■■□□□ 1.24
TMED1-205ENST00000589638 SUPT16HQ9Y5B9 1047 aaKnown RBP22.8■■□□□ 1.24
TMED1-205ENST00000589638 SIPA1L3O60292 1781 aaPredicted RBP22.8■■□□□ 1.24
TMED1-205ENST00000589638 VAMP4O75379 141 aa22.79■■□□□ 1.24
TMED1-205ENST00000589638 CT47B1P0C2W7 299 aaPredicted RBP22.79■■□□□ 1.24
TMED1-205ENST00000589638 KDM3BQ7LBC6 1761 aa22.78■■□□□ 1.24
TMED1-205ENST00000589638 KRT27Q7Z3Y8 459 aa22.78■■□□□ 1.24
TMED1-205ENST00000589638 DOT1LQ8TEK3 1739 aa22.78■■□□□ 1.24
TMED1-205ENST00000589638 BCL9O00512 1426 aa22.76■■□□□ 1.23
TMED1-205ENST00000589638 TCERG1O14776 1098 aaKnown RBP22.76■■□□□ 1.23
TMED1-205ENST00000589638 RARSP54136 660 aaKnown RBP22.76■■□□□ 1.23
TMED1-205ENST00000589638 BCL2L13Q9BXK5 485 aa22.76■■□□□ 1.23
TMED1-205ENST00000589638 RGS12O14924 1447 aa22.75■■□□□ 1.23
TMED1-205ENST00000589638 KCNQ2O43526 872 aa22.75■■□□□ 1.23
TMED1-205ENST00000589638 BCAR3O75815 825 aa22.75■■□□□ 1.23
TMED1-205ENST00000589638 ZNF496Q96IT1 587 aaPredicted RBP22.75■■□□□ 1.23
TMED1-205ENST00000589638 ASAP1Q9ULH1 1129 aa22.75■■□□□ 1.23
TMED1-205ENST00000589638 FMNL2Q96PY5 1086 aa22.74■■□□□ 1.23
TMED1-205ENST00000589638 ATG3Q9NT62 314 aa22.74■■□□□ 1.23
TMED1-205ENST00000589638 SSH1Q8WYL5 1049 aa22.73■■□□□ 1.23
TMED1-205ENST00000589638 NECTIN2Q92692 538 aa22.73■■□□□ 1.23
TMED1-205ENST00000589638 SMC4Q9NTJ3 1288 aa22.73■■□□□ 1.23
TMED1-205ENST00000589638 PRAMEF22A3QJZ6 481 aa22.72■■□□□ 1.23
TMED1-205ENST00000589638 PTCD1O75127 700 aaKnown RBP22.72■■□□□ 1.23
TMED1-205ENST00000589638 GIGYF1O75420 1035 aaPredicted RBP22.71■■□□□ 1.23
TMED1-205ENST00000589638 EIF2S2P20042 333 aaKnown RBP22.71■■□□□ 1.23
TMED1-205ENST00000589638 ZNF428Q96B54 188 aa22.71■■□□□ 1.23
TMED1-205ENST00000589638 ITGB4P16144 1822 aa22.71■■□□□ 1.23
TMED1-205ENST00000589638 RRP1P56182 461 aaKnown RBP22.7■■□□□ 1.22
TMED1-205ENST00000589638 HDGFL1Q5TGJ6 251 aa22.7■■□□□ 1.22
TMED1-205ENST00000589638 PTF1AQ7RTS3 328 aa22.7■■□□□ 1.22
TMED1-205ENST00000589638 HEG1Q9ULI3 1381 aa22.7■■□□□ 1.22
TMED1-205ENST00000589638 PAPPAQ13219 1627 aa22.7■■□□□ 1.22
TMED1-205ENST00000589638 KCPQ6ZWJ8 1503 aa22.69■■□□□ 1.22
TMED1-205ENST00000589638 SOS1Q07889 1333 aaPredicted RBP22.69■■□□□ 1.22
TMED1-205ENST00000589638 HOXB7P09629 217 aa22.69■■□□□ 1.22
TMED1-205ENST00000589638 ALDH1L2Q3SY69 923 aa22.69■■□□□ 1.22
TMED1-205ENST00000589638 FAM196AQ6ZSG2 479 aa22.69■■□□□ 1.22
TMED1-205ENST00000589638 RBM42Q9BTD8 480 aaKnown RBP22.69■■□□□ 1.22
TMED1-205ENST00000589638 BRWD3Q6RI45 1802 aa22.68■■□□□ 1.22
TMED1-205ENST00000589638 PLIN1O60240 522 aa22.68■■□□□ 1.22
TMED1-205ENST00000589638 SNRPA1P09661 255 aaKnown RBP22.68■■□□□ 1.22
TMED1-205ENST00000589638 CANXP27824 592 aaKnown RBP22.67■■□□□ 1.22
TMED1-205ENST00000589638 CCDC30Q5VVM6 783 aa22.67■■□□□ 1.22
TMED1-205ENST00000589638 MRPL50Q8N5N7 158 aaKnown RBP22.67■■□□□ 1.22
TMED1-205ENST00000589638 FRAT1Q92837 279 aaPredicted RBP22.67■■□□□ 1.22
TMED1-205ENST00000589638 KAT6BQ8WYB5 2073 aa22.66■■□□□ 1.22
TMED1-205ENST00000589638 RNF123Q5XPI4 1314 aa22.65■■□□□ 1.22
TMED1-205ENST00000589638 IRX6P78412 446 aaPredicted RBP22.65■■□□□ 1.22
TMED1-205ENST00000589638 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.65■■□□□ 1.22
TMED1-205ENST00000589638 STK31Q9BXU1 1019 aa22.65■■□□□ 1.22
TMED1-205ENST00000589638 PALLDQ8WX93 1383 aa22.64■■□□□ 1.22
TMED1-205ENST00000589638 SMARCC1Q92922 1105 aaPredicted RBP22.64■■□□□ 1.21
TMED1-205ENST00000589638 NHSQ6T4R5 1651 aa22.64■■□□□ 1.21
TMED1-205ENST00000589638 NOB1Q9ULX3 412 aaKnown RBP22.63■■□□□ 1.21
TMED1-205ENST00000589638 USP16Q9Y5T5 823 aa22.63■■□□□ 1.21
TMED1-205ENST00000589638 UBR2Q8IWV8 1755 aa22.63■■□□□ 1.21
TMED1-205ENST00000589638 TRIM37O94972 964 aa22.62■■□□□ 1.21
TMED1-205ENST00000589638 SLC4A2P04920 1241 aa22.62■■□□□ 1.21
TMED1-205ENST00000589638 NEFLP07196 543 aa22.62■■□□□ 1.21
TMED1-205ENST00000589638 CHMP4AQ9BY43 222 aa22.62■■□□□ 1.21
TMED1-205ENST00000589638 BCL11BQ9C0K0 894 aaPredicted RBP22.62■■□□□ 1.21
TMED1-205ENST00000589638 CHPF2Q9P2E5 772 aa22.62■■□□□ 1.21
TMED1-205ENST00000589638 DNAJC10Q8IXB1 793 aa22.61■■□□□ 1.21
TMED1-205ENST00000589638 SLC4A9Q96Q91 983 aa22.61■■□□□ 1.21
TMED1-205ENST00000589638 C5P01031 1676 aa22.61■■□□□ 1.21
TMED1-205ENST00000589638 KIF16BQ96L93 1317 aa22.6■■□□□ 1.21
TMED1-205ENST00000589638 ANXA1P04083 346 aa22.6■■□□□ 1.21
TMED1-205ENST00000589638 VSIG10Q8N0Z9 540 aa22.6■■□□□ 1.21
TMED1-205ENST00000589638 LOC102724428A0A0B4J2F2 783 aa22.59■■□□□ 1.21
TMED1-205ENST00000589638 SIK1P57059 783 aa22.59■■□□□ 1.21
TMED1-205ENST00000589638 ZKSCAN2Q63HK3 967 aa22.59■■□□□ 1.21
TMED1-205ENST00000589638 G2E3Q7L622 706 aa22.59■■□□□ 1.21
TMED1-205ENST00000589638 TNNQ9UQP3 1299 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms