RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 KANK4Q5T7N3 995 aaPredicted RBP7.01□□□□□ -1.29
HMGN1P30-201ENST00000589286 PRICKLE2Q7Z3G6 844 aa7.01□□□□□ -1.29
HMGN1P30-201ENST00000589286 SIX5Q8N196 739 aa7.01□□□□□ -1.29
HMGN1P30-201ENST00000589286 C1orf115Q9H7X2 142 aa7.01□□□□□ -1.29
HMGN1P30-201ENST00000589286 SERTAD1Q9UHV2 236 aa7.01□□□□□ -1.29
HMGN1P30-201ENST00000589286 TMEM229AB2RXF0 380 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 USP17L15C9J2P7 530 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 USP17L10C9JJH3 530 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 USP17L13C9JLJ4 530 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 USP17L12C9JPN9 530 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 USP17L11C9JVI0 530 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 USP17L21D6R901 530 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 USP17L18D6R9N7 530 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 USP17L22D6RA61 530 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 USP17L17D6RBQ6 530 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 USP17L19D6RCP7 530 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 USP17L20D6RJB6 530 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 ZBTB7BO15156 539 aaPredicted RBP7□□□□□ -1.29
HMGN1P30-201ENST00000589286 USP17L24Q0WX57 530 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 CDCA8Q53HL2 280 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 SERBP1Q8NC51 408 aaKnown RBP eCLIP7□□□□□ -1.29
HMGN1P30-201ENST00000589286 GRIP2Q9C0E4 1043 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 ZNF358Q9NW07 568 aa7□□□□□ -1.29
HMGN1P30-201ENST00000589286 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.99□□□□□ -1.29
HMGN1P30-201ENST00000589286 SMTNP53814 917 aa6.99□□□□□ -1.29
HMGN1P30-201ENST00000589286 PTK7Q13308 1070 aa6.99□□□□□ -1.29
HMGN1P30-201ENST00000589286 CRTC2Q53ET0 693 aaPredicted RBP6.99□□□□□ -1.29
HMGN1P30-201ENST00000589286 NBPF15Q8N660 670 aa6.99□□□□□ -1.29
HMGN1P30-201ENST00000589286 PBXIP1Q96AQ6 731 aa6.99□□□□□ -1.29
HMGN1P30-201ENST00000589286 SLC4A9Q96Q91 983 aa6.99□□□□□ -1.29
HMGN1P30-201ENST00000589286 KIAA1024Q9UPX6 916 aa6.99□□□□□ -1.29
HMGN1P30-201ENST00000589286 HRH3Q9Y5N1 445 aa6.99□□□□□ -1.29
HMGN1P30-201ENST00000589286 A6NJY4 79 aa6.98□□□□□ -1.29
HMGN1P30-201ENST00000589286 SEC13P55735 322 aa6.98□□□□□ -1.29
HMGN1P30-201ENST00000589286 TAS1R3Q7RTX0 852 aa6.98□□□□□ -1.29
HMGN1P30-201ENST00000589286 PPARGC1BQ86YN6 1023 aaKnown RBP6.98□□□□□ -1.29
HMGN1P30-201ENST00000589286 ANKMY2Q8IV38 441 aa6.98□□□□□ -1.29
HMGN1P30-201ENST00000589286 ARID3AQ99856 593 aa6.98□□□□□ -1.29
HMGN1P30-201ENST00000589286 FHDC1Q9C0D6 1143 aaPredicted RBP6.98□□□□□ -1.29
HMGN1P30-201ENST00000589286 SPATA31C2B4DYI2 1134 aa6.97□□□□□ -1.29
HMGN1P30-201ENST00000589286 M0R2N6 131 aa6.97□□□□□ -1.29
HMGN1P30-201ENST00000589286 PPP1R15AO75807 674 aaPredicted RBP6.97□□□□□ -1.29
HMGN1P30-201ENST00000589286 RHOQP17081 205 aa6.97□□□□□ -1.29
HMGN1P30-201ENST00000589286 PTSQ03393 145 aa6.97□□□□□ -1.29
HMGN1P30-201ENST00000589286 POU4F2Q12837 409 aa6.97□□□□□ -1.29
HMGN1P30-201ENST00000589286 DPYDQ12882 1025 aa6.97□□□□□ -1.29
HMGN1P30-201ENST00000589286 WDR44Q5JSH3 913 aa6.97□□□□□ -1.29
HMGN1P30-201ENST00000589286 NBPF10Q6P3W6 841 aaKnown RBP6.97□□□□□ -1.29
HMGN1P30-201ENST00000589286 FAM200AQ8TCP9 573 aa6.97□□□□□ -1.29
HMGN1P30-201ENST00000589286 RHBDD1Q8TEB9 315 aa6.97□□□□□ -1.29
HMGN1P30-201ENST00000589286 NXF1Q9UBU9 619 aaKnown RBP6.97□□□□□ -1.29
HMGN1P30-201ENST00000589286 SFI1A8K8P3 1242 aa6.96□□□□□ -1.3
HMGN1P30-201ENST00000589286 CDK2AP1O14519 115 aa6.96□□□□□ -1.3
HMGN1P30-201ENST00000589286 MTFR1Q15390 333 aa6.96□□□□□ -1.3
HMGN1P30-201ENST00000589286 HINFPQ9BQA5 517 aa6.96□□□□□ -1.3
HMGN1P30-201ENST00000589286 NIFKQ9BYG3 293 aaKnown RBP6.96□□□□□ -1.3
HMGN1P30-201ENST00000589286 NOVA2Q9UNW9 492 aaKnown RBP6.96□□□□□ -1.3
HMGN1P30-201ENST00000589286 ACIN1Q9UKV3 1341 aaKnown RBP6.96□□□□□ -1.3
HMGN1P30-201ENST00000589286 ATG7O95352 703 aa6.95□□□□□ -1.3
HMGN1P30-201ENST00000589286 ELOAQ14241 798 aaKnown RBP6.95□□□□□ -1.3
HMGN1P30-201ENST00000589286 NPAS3Q8IXF0 933 aa6.95□□□□□ -1.3
HMGN1P30-201ENST00000589286 TNS4Q8IZW8 715 aa6.95□□□□□ -1.3
HMGN1P30-201ENST00000589286 SLC16A10Q8TF71 515 aa6.95□□□□□ -1.3
HMGN1P30-201ENST00000589286 TIMMDC1Q9NPL8 285 aa6.95□□□□□ -1.3
HMGN1P30-201ENST00000589286 CHMP3Q9Y3E7 222 aa6.95□□□□□ -1.3
HMGN1P30-201ENST00000589286 PHKA2P46019 1235 aa6.94□□□□□ -1.3
HMGN1P30-201ENST00000589286 CCDC155Q8N6L0 562 aa6.94□□□□□ -1.3
HMGN1P30-201ENST00000589286 TSEN2Q8NCE0 465 aaKnown RBP6.94□□□□□ -1.3
HMGN1P30-201ENST00000589286 CABP1Q9NZU7 370 aa6.94□□□□□ -1.3
HMGN1P30-201ENST00000589286 SCHIP1Q9P0W5 487 aaPredicted RBP6.94□□□□□ -1.3
HMGN1P30-201ENST00000589286 DYRK1BQ9Y463 629 aa6.94□□□□□ -1.3
HMGN1P30-201ENST00000589286 A0A1B0GTH6 734 aa6.93□□□□□ -1.3
HMGN1P30-201ENST00000589286 SLC35F4A4IF30 521 aa6.93□□□□□ -1.3
HMGN1P30-201ENST00000589286 DKK1O94907 266 aa6.93□□□□□ -1.3
HMGN1P30-201ENST00000589286 SRPK2P78362 688 aaKnown RBP6.93□□□□□ -1.3
HMGN1P30-201ENST00000589286 C4orf17Q53FE4 359 aa6.93□□□□□ -1.3
HMGN1P30-201ENST00000589286 SLC9A9Q8IVB4 645 aa6.93□□□□□ -1.3
HMGN1P30-201ENST00000589286 TERTO14746 1132 aaKnown RBP6.92□□□□□ -1.3
HMGN1P30-201ENST00000589286 PPFIA3O75145 1194 aa6.92□□□□□ -1.3
HMGN1P30-201ENST00000589286 PLA2G4AP47712 749 aa6.92□□□□□ -1.3
HMGN1P30-201ENST00000589286 EPHA4P54764 986 aa6.92□□□□□ -1.3
HMGN1P30-201ENST00000589286 NBPF1Q3BBV0 1214 aa6.92□□□□□ -1.3
HMGN1P30-201ENST00000589286 ARXQ96QS3 562 aa6.92□□□□□ -1.3
HMGN1P30-201ENST00000589286 GAS2L1Q99501 681 aaPredicted RBP6.92□□□□□ -1.3
HMGN1P30-201ENST00000589286 IQSEC3Q9UPP2 1182 aaPredicted RBP6.92□□□□□ -1.3
HMGN1P30-201ENST00000589286 SENP3-EIF4A1A0A087X0R7 540 aa6.91□□□□□ -1.3
HMGN1P30-201ENST00000589286 FOXK2Q01167 660 aa6.91□□□□□ -1.3
HMGN1P30-201ENST00000589286 SWI5Q1ZZU3 235 aa6.91□□□□□ -1.3
HMGN1P30-201ENST00000589286 RIPOR1Q6ZS17 1223 aa6.91□□□□□ -1.3
HMGN1P30-201ENST00000589286 GAS2L2Q8NHY3 880 aa6.91□□□□□ -1.3
HMGN1P30-201ENST00000589286 AIDAQ96BJ3 306 aa6.91□□□□□ -1.3
HMGN1P30-201ENST00000589286 ZNF775Q96BV0 537 aaPredicted RBP6.91□□□□□ -1.3
HMGN1P30-201ENST00000589286 ZNF232Q9UNY5 417 aa6.91□□□□□ -1.3
HMGN1P30-201ENST00000589286 SERTM1A2A2V5 107 aa6.9□□□□□ -1.3
HMGN1P30-201ENST00000589286 H7C1W4 665 aa6.9□□□□□ -1.3
HMGN1P30-201ENST00000589286 PPP1R12BO60237 982 aaPredicted RBP6.9□□□□□ -1.3
HMGN1P30-201ENST00000589286 F11P03951 625 aa6.9□□□□□ -1.3
HMGN1P30-201ENST00000589286 CSB-PGBD3P0DP91 1061 aa6.9□□□□□ -1.3
HMGN1P30-201ENST00000589286 ITGA6P23229 1130 aa6.9□□□□□ -1.3
HMGN1P30-201ENST00000589286 PSMA6P60900 246 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms