RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 ITGB4P16144 1822 aa18.8■□□□□ 0.6
CLPTM1-210ENST00000589158 PPP1R1BQ9UD71 204 aaPredicted RBP18.8■□□□□ 0.6
CLPTM1-210ENST00000589158 PNPLA7Q6ZV29 1317 aa18.79■□□□□ 0.6
CLPTM1-210ENST00000589158 ZNF316A6NFI3 1004 aaPredicted RBP18.79■□□□□ 0.6
CLPTM1-210ENST00000589158 GNAT3A8MTJ3 354 aa18.79■□□□□ 0.6
CLPTM1-210ENST00000589158 MSH5O43196 834 aa18.79■□□□□ 0.6
CLPTM1-210ENST00000589158 AK7Q96M32 723 aa18.79■□□□□ 0.6
CLPTM1-210ENST00000589158 MTFR1LQ9H019 292 aa18.79■□□□□ 0.6
CLPTM1-210ENST00000589158 SLC52A2Q9HAB3 445 aa18.79■□□□□ 0.6
CLPTM1-210ENST00000589158 MYBBP1AQ9BQG0 1328 aaKnown RBP18.78■□□□□ 0.6
CLPTM1-210ENST00000589158 PTCD1O75127 700 aaKnown RBP18.78■□□□□ 0.6
CLPTM1-210ENST00000589158 ITPK1Q13572 414 aa18.78■□□□□ 0.6
CLPTM1-210ENST00000589158 MAP3K5Q99683 1374 aa18.78■□□□□ 0.6
CLPTM1-210ENST00000589158 LINC00116Q8NCU8 138 aa18.77■□□□□ 0.6
CLPTM1-210ENST00000589158 CASZ1Q86V15 1759 aa18.76■□□□□ 0.59
CLPTM1-210ENST00000589158 NEFMP07197 916 aa18.76■□□□□ 0.59
CLPTM1-210ENST00000589158 TEFQ10587 303 aa18.75■□□□□ 0.59
CLPTM1-210ENST00000589158 COL23A1Q86Y22 540 aaPredicted RBP18.75■□□□□ 0.59
CLPTM1-210ENST00000589158 SLC16A10Q8TF71 515 aa18.75■□□□□ 0.59
CLPTM1-210ENST00000589158 SLC4A9Q96Q91 983 aa18.75■□□□□ 0.59
CLPTM1-210ENST00000589158 FLAD1Q8NFF5 587 aa18.74■□□□□ 0.59
CLPTM1-210ENST00000589158 IL17REQ8NFR9 667 aa18.74■□□□□ 0.59
CLPTM1-210ENST00000589158 PRKRIP1Q9H875 184 aaPredicted RBP18.74■□□□□ 0.59
CLPTM1-210ENST00000589158 PHF14O94880 888 aa18.73■□□□□ 0.59
CLPTM1-210ENST00000589158 PTGER2P43116 358 aa18.73■□□□□ 0.59
CLPTM1-210ENST00000589158 SLC39A6Q13433 755 aa18.73■□□□□ 0.59
CLPTM1-210ENST00000589158 RTF1Q92541 710 aaKnown RBP18.73■□□□□ 0.59
CLPTM1-210ENST00000589158 C5P01031 1676 aa18.73■□□□□ 0.59
CLPTM1-210ENST00000589158 GNPATO15228 680 aa18.72■□□□□ 0.59
CLPTM1-210ENST00000589158 SMIM5Q71RC9 77 aa18.72■□□□□ 0.59
CLPTM1-210ENST00000589158 PNNQ9H307 717 aaKnown RBP18.72■□□□□ 0.59
CLPTM1-210ENST00000589158 MRC1P22897 1456 aa18.71■□□□□ 0.59
CLPTM1-210ENST00000589158 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.7■□□□□ 0.58
CLPTM1-210ENST00000589158 C4BP0C0L5 1744 aa18.7■□□□□ 0.58
CLPTM1-210ENST00000589158 POLD1P28340 1107 aa18.7■□□□□ 0.58
CLPTM1-210ENST00000589158 AMIGO3Q86WK7 504 aa18.7■□□□□ 0.58
CLPTM1-210ENST00000589158 TTC5Q8N0Z6 440 aa18.7■□□□□ 0.58
CLPTM1-210ENST00000589158 SCN11AQ9UI33 1791 aa18.7■□□□□ 0.58
CLPTM1-210ENST00000589158 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
CLPTM1-210ENST00000589158 SSFA2P28290 1259 aa18.69■□□□□ 0.58
CLPTM1-210ENST00000589158 MCM10Q7L590 875 aa18.69■□□□□ 0.58
CLPTM1-210ENST00000589158 PLEKHF1Q96S99 279 aa18.69■□□□□ 0.58
CLPTM1-210ENST00000589158 WDR43Q15061 677 aaKnown RBP eCLIP18.68■□□□□ 0.58
CLPTM1-210ENST00000589158 RC3H1Q5TC82 1133 aaKnown RBP18.68■□□□□ 0.58
CLPTM1-210ENST00000589158 MSL1Q68DK7 614 aa18.68■□□□□ 0.58
CLPTM1-210ENST00000589158 ARXQ96QS3 562 aa18.68■□□□□ 0.58
CLPTM1-210ENST00000589158 SGIP1Q9BQI5 828 aa18.68■□□□□ 0.58
CLPTM1-210ENST00000589158 RTCBQ9Y3I0 505 aaKnown RBP18.68■□□□□ 0.58
CLPTM1-210ENST00000589158 HTATSF1O43719 755 aaKnown RBP18.67■□□□□ 0.58
CLPTM1-210ENST00000589158 DCTN1Q14203 1278 aa18.67■□□□□ 0.58
CLPTM1-210ENST00000589158 DNAJC10Q8IXB1 793 aa18.67■□□□□ 0.58
CLPTM1-210ENST00000589158 CEMIPQ8WUJ3 1361 aa18.67■□□□□ 0.58
CLPTM1-210ENST00000589158 ADAMTS7Q9UKP4 1686 aa18.66■□□□□ 0.58
CLPTM1-210ENST00000589158 BTBD11A6QL63 1104 aa18.66■□□□□ 0.58
CLPTM1-210ENST00000589158 NFE2L2Q16236 605 aa18.66■□□□□ 0.58
CLPTM1-210ENST00000589158 TRAPPC3LQ5T215 181 aa18.66■□□□□ 0.58
CLPTM1-210ENST00000589158 CNTNAP4Q9C0A0 1308 aa18.66■□□□□ 0.58
CLPTM1-210ENST00000589158 QSER1Q2KHR3 1735 aa18.66■□□□□ 0.58
CLPTM1-210ENST00000589158 TAF1LQ8IZX4 1826 aa18.65■□□□□ 0.58
CLPTM1-210ENST00000589158 CRKLP46109 303 aaKnown RBP18.65■□□□□ 0.58
CLPTM1-210ENST00000589158 ZNF790Q6PG37 636 aa18.65■□□□□ 0.58
CLPTM1-210ENST00000589158 RPS6KA4O75676 772 aa18.64■□□□□ 0.57
CLPTM1-210ENST00000589158 KLHL34Q8N239 644 aa18.64■□□□□ 0.57
CLPTM1-210ENST00000589158 FHDC1Q9C0D6 1143 aaPredicted RBP18.64■□□□□ 0.57
CLPTM1-210ENST00000589158 TUBGCP6Q96RT7 1819 aa18.64■□□□□ 0.57
CLPTM1-210ENST00000589158 CCDC146Q8IYE0 955 aa18.63■□□□□ 0.57
CLPTM1-210ENST00000589158 VSIG10Q8N0Z9 540 aa18.63■□□□□ 0.57
CLPTM1-210ENST00000589158 ZNF496Q96IT1 587 aaPredicted RBP18.63■□□□□ 0.57
CLPTM1-210ENST00000589158 ARHGEF1Q92888 912 aaKnown RBP18.62■□□□□ 0.57
CLPTM1-210ENST00000589158 CCDC87Q9NVE4 849 aa18.62■□□□□ 0.57
CLPTM1-210ENST00000589158 KCPQ6ZWJ8 1503 aa18.62■□□□□ 0.57
CLPTM1-210ENST00000589158 ZNF831Q5JPB2 1677 aa18.62■□□□□ 0.57
CLPTM1-210ENST00000589158 ANP32CO43423 234 aa18.61■□□□□ 0.57
CLPTM1-210ENST00000589158 KCNQ3O43525 872 aa18.61■□□□□ 0.57
CLPTM1-210ENST00000589158 CYP19A1P11511 503 aaPredicted RBP18.61■□□□□ 0.57
CLPTM1-210ENST00000589158 ADRA2BP18089 450 aa18.61■□□□□ 0.57
CLPTM1-210ENST00000589158 RFC4P35249 363 aa18.61■□□□□ 0.57
CLPTM1-210ENST00000589158 INTS5Q6P9B9 1019 aaKnown RBP18.61■□□□□ 0.57
CLPTM1-210ENST00000589158 FMNL2Q96PY5 1086 aa18.61■□□□□ 0.57
CLPTM1-210ENST00000589158 SYT17Q9BSW7 474 aa18.61■□□□□ 0.57
CLPTM1-210ENST00000589158 ADAMTS8Q9UP79 889 aa18.61■□□□□ 0.57
CLPTM1-210ENST00000589158 RIPK4P57078 832 aa18.6■□□□□ 0.57
CLPTM1-210ENST00000589158 TAF7Q15545 349 aaPredicted RBP18.6■□□□□ 0.57
CLPTM1-210ENST00000589158 HEG1Q9ULI3 1381 aa18.59■□□□□ 0.57
CLPTM1-210ENST00000589158 STARD3NLO95772 234 aa18.59■□□□□ 0.57
CLPTM1-210ENST00000589158 RUNDC1Q96C34 613 aa18.59■□□□□ 0.57
CLPTM1-210ENST00000589158 THUMPD2Q9BTF0 503 aaKnown RBP18.59■□□□□ 0.57
CLPTM1-210ENST00000589158 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
CLPTM1-210ENST00000589158 NEUROD2Q15784 382 aa18.58■□□□□ 0.56
CLPTM1-210ENST00000589158 TEX13AQ9BXU3 409 aaPredicted RBP18.58■□□□□ 0.56
CLPTM1-210ENST00000589158 MIS18AQ9NYP9 233 aa18.58■□□□□ 0.56
CLPTM1-210ENST00000589158 RRP7AQ9Y3A4 280 aaKnown RBP18.58■□□□□ 0.56
CLPTM1-210ENST00000589158 TJP1Q07157 1748 aa18.57■□□□□ 0.56
CLPTM1-210ENST00000589158 UBR3Q6ZT12 1888 aa18.57■□□□□ 0.56
CLPTM1-210ENST00000589158 CANXP27824 592 aaKnown RBP18.57■□□□□ 0.56
CLPTM1-210ENST00000589158 TMPOP42166 694 aaKnown RBP18.57■□□□□ 0.56
CLPTM1-210ENST00000589158 COL5A3P25940 1745 aaPredicted RBP18.57■□□□□ 0.56
CLPTM1-210ENST00000589158 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
CLPTM1-210ENST00000589158 NLGN1Q8N2Q7 840 aa18.56■□□□□ 0.56
CLPTM1-210ENST00000589158 PNISRQ8TF01 805 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms