RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 USP42Q9H9J4 1324 aaKnown RBP16.64■□□□□ 0.25
KDM4B-208ENST00000589104 HMOX1P09601 288 aa16.64■□□□□ 0.25
KDM4B-208ENST00000589104 ANKRD45Q5TZF3 282 aa16.64■□□□□ 0.25
KDM4B-208ENST00000589104 HEG1Q9ULI3 1381 aa16.64■□□□□ 0.25
KDM4B-208ENST00000589104 SDSP20132 328 aa16.64■□□□□ 0.25
KDM4B-208ENST00000589104 SSFA2P28290 1259 aa16.63■□□□□ 0.25
KDM4B-208ENST00000589104 AEBP1Q8IUX7 1158 aa16.63■□□□□ 0.25
KDM4B-208ENST00000589104 OTUD7AQ8TE49 926 aaPredicted RBP16.63■□□□□ 0.25
KDM4B-208ENST00000589104 FLT4P35916 1363 aa16.63■□□□□ 0.25
KDM4B-208ENST00000589104 MAP3K19Q56UN5 1328 aa16.62■□□□□ 0.25
KDM4B-208ENST00000589104 TERF1P54274 439 aa16.62■□□□□ 0.25
KDM4B-208ENST00000589104 COL18A1P39060 1754 aa16.62■□□□□ 0.25
KDM4B-208ENST00000589104 LAMB4A4D0S4 1761 aa16.61■□□□□ 0.25
KDM4B-208ENST00000589104 CWC22Q9HCG8 908 aaKnown RBP16.61■□□□□ 0.25
KDM4B-208ENST00000589104 PKD1L3Q7Z443 1732 aa16.61■□□□□ 0.25
KDM4B-208ENST00000589104 ADAMTSL3P82987 1691 aa16.61■□□□□ 0.25
KDM4B-208ENST00000589104 PAPPAQ13219 1627 aa16.61■□□□□ 0.25
KDM4B-208ENST00000589104 RPAP1Q9BWH6 1393 aaPredicted RBP16.61■□□□□ 0.25
KDM4B-208ENST00000589104 C16orf71Q8IYS4 520 aaPredicted RBP16.61■□□□□ 0.25
KDM4B-208ENST00000589104 GBP4Q96PP9 640 aa16.6■□□□□ 0.25
KDM4B-208ENST00000589104 JCADQ9P266 1359 aa16.6■□□□□ 0.25
KDM4B-208ENST00000589104 RRP9O43818 475 aaKnown RBP16.6■□□□□ 0.25
KDM4B-208ENST00000589104 ADGRL3Q9HAR2 1447 aa16.6■□□□□ 0.25
KDM4B-208ENST00000589104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.6■□□□□ 0.25
KDM4B-208ENST00000589104 GPT2Q8TD30 523 aa16.6■□□□□ 0.25
KDM4B-208ENST00000589104 COG3Q96JB2 828 aa16.6■□□□□ 0.25
KDM4B-208ENST00000589104 RRS1Q15050 365 aaKnown RBP16.59■□□□□ 0.25
KDM4B-208ENST00000589104 NUP188Q5SRE5 1749 aa16.59■□□□□ 0.25
KDM4B-208ENST00000589104 ACEP12821 1306 aa16.58■□□□□ 0.25
KDM4B-208ENST00000589104 TMEM87AQ8NBN3 555 aa16.58■□□□□ 0.24
KDM4B-208ENST00000589104 KCNB2Q92953 911 aa16.58■□□□□ 0.24
KDM4B-208ENST00000589104 MEIS3Q99687 375 aa16.58■□□□□ 0.24
KDM4B-208ENST00000589104 UBR2Q8IWV8 1755 aa16.57■□□□□ 0.24
KDM4B-208ENST00000589104 PKP1Q13835 747 aa16.57■□□□□ 0.24
KDM4B-208ENST00000589104 POLA2Q14181 598 aa16.57■□□□□ 0.24
KDM4B-208ENST00000589104 KRT24Q2M2I5 525 aa16.57■□□□□ 0.24
KDM4B-208ENST00000589104 ESPNB1AK53 854 aa16.57■□□□□ 0.24
KDM4B-208ENST00000589104 ANAPC15P60006 121 aa16.57■□□□□ 0.24
KDM4B-208ENST00000589104 CCDC173Q0VFZ6 552 aa16.57■□□□□ 0.24
KDM4B-208ENST00000589104 ZNF500O60304 480 aaPredicted RBP16.56■□□□□ 0.24
KDM4B-208ENST00000589104 BRD1O95696 1058 aa16.56■□□□□ 0.24
KDM4B-208ENST00000589104 DCTN1Q14203 1278 aa16.56■□□□□ 0.24
KDM4B-208ENST00000589104 INTS4Q96HW7 963 aaKnown RBP16.56■□□□□ 0.24
KDM4B-208ENST00000589104 SNRKQ9NRH2 765 aa16.56■□□□□ 0.24
KDM4B-208ENST00000589104 HAP1P54257 671 aaPredicted RBP16.55■□□□□ 0.24
KDM4B-208ENST00000589104 PDE1AP54750 535 aa16.55■□□□□ 0.24
KDM4B-208ENST00000589104 TCHHQ07283 1943 aa16.55■□□□□ 0.24
KDM4B-208ENST00000589104 HSP90AB1P08238 724 aaKnown RBP16.55■□□□□ 0.24
KDM4B-208ENST00000589104 TJP1Q07157 1748 aa16.55■□□□□ 0.24
KDM4B-208ENST00000589104 LAMA4Q16363 1823 aa16.55■□□□□ 0.24
KDM4B-208ENST00000589104 NUCB2P80303 420 aa16.54■□□□□ 0.24
KDM4B-208ENST00000589104 ARID3AQ99856 593 aa16.54■□□□□ 0.24
KDM4B-208ENST00000589104 MTHFSDQ2M296 383 aaKnown RBP16.54■□□□□ 0.24
KDM4B-208ENST00000589104 PLEKHG2Q9H7P9 1386 aa16.53■□□□□ 0.24
KDM4B-208ENST00000589104 LTKP29376 864 aa16.53■□□□□ 0.24
KDM4B-208ENST00000589104 ZSCAN23Q3MJ62 389 aa16.53■□□□□ 0.24
KDM4B-208ENST00000589104 TXNDC2Q86VQ3 553 aa16.53■□□□□ 0.24
KDM4B-208ENST00000589104 RGPD5Q99666 1765 aa16.53■□□□□ 0.24
KDM4B-208ENST00000589104 CCT4P50991 539 aaKnown RBP16.53■□□□□ 0.24
KDM4B-208ENST00000589104 SPRYD3Q8NCJ5 442 aa16.53■□□□□ 0.24
KDM4B-208ENST00000589104 COL22A1Q8NFW1 1626 aaPredicted RBP16.52■□□□□ 0.24
KDM4B-208ENST00000589104 KIF1AQ12756 1690 aa16.52■□□□□ 0.24
KDM4B-208ENST00000589104 ARFGEF2Q9Y6D5 1785 aa16.52■□□□□ 0.24
KDM4B-208ENST00000589104 G2E3Q7L622 706 aa16.52■□□□□ 0.24
KDM4B-208ENST00000589104 TMEM94Q12767 1356 aa16.51■□□□□ 0.23
KDM4B-208ENST00000589104 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
KDM4B-208ENST00000589104 HSP90AB2PQ58FF8 381 aa16.51■□□□□ 0.23
KDM4B-208ENST00000589104 TTC14Q96N46 770 aa16.51■□□□□ 0.23
KDM4B-208ENST00000589104 GZF1Q9H116 711 aaPredicted RBP16.51■□□□□ 0.23
KDM4B-208ENST00000589104 ATP8B2P98198 1209 aa16.51■□□□□ 0.23
KDM4B-208ENST00000589104 PDE4CQ08493 712 aa16.51■□□□□ 0.23
KDM4B-208ENST00000589104 SULT6B1Q6IMI4 303 aa16.51■□□□□ 0.23
KDM4B-208ENST00000589104 SSH3Q8TE77 659 aa16.51■□□□□ 0.23
KDM4B-208ENST00000589104 ESYT1Q9BSJ8 1104 aa16.51■□□□□ 0.23
KDM4B-208ENST00000589104 IL25Q9H293 177 aa16.5■□□□□ 0.23
KDM4B-208ENST00000589104 NOL7Q9UMY1 257 aaKnown RBP16.5■□□□□ 0.23
KDM4B-208ENST00000589104 ZGPATQ8N5A5 531 aaKnown RBP16.5■□□□□ 0.23
KDM4B-208ENST00000589104 PI4K2BQ8TCG2 481 aa16.5■□□□□ 0.23
KDM4B-208ENST00000589104 ERC2O15083 957 aa16.49■□□□□ 0.23
KDM4B-208ENST00000589104 MCM10Q7L590 875 aa16.49■□□□□ 0.23
KDM4B-208ENST00000589104 OFD1O75665 1012 aa16.49■□□□□ 0.23
KDM4B-208ENST00000589104 SHANK3Q9BYB0 1731 aa16.49■□□□□ 0.23
KDM4B-208ENST00000589104 RBSNQ9H1K0 784 aa16.49■□□□□ 0.23
KDM4B-208ENST00000589104 TBX22Q9Y458 520 aa16.49■□□□□ 0.23
KDM4B-208ENST00000589104 CHMLP26374 656 aa16.48■□□□□ 0.23
KDM4B-208ENST00000589104 FGD1P98174 961 aa16.48■□□□□ 0.23
KDM4B-208ENST00000589104 MTX1Q13505 466 aa16.48■□□□□ 0.23
KDM4B-208ENST00000589104 NSFL1CQ9UNZ2 370 aaKnown RBP16.48■□□□□ 0.23
KDM4B-208ENST00000589104 TMEM63CQ9P1W3 806 aa16.47■□□□□ 0.23
KDM4B-208ENST00000589104 HSPA4P34932 840 aa16.47■□□□□ 0.23
KDM4B-208ENST00000589104 EYA1Q99502 592 aa16.47■□□□□ 0.23
KDM4B-208ENST00000589104 FAM69CQ0P6D2 419 aa16.46■□□□□ 0.23
KDM4B-208ENST00000589104 PALD1Q9ULE6 856 aa16.46■□□□□ 0.23
KDM4B-208ENST00000589104 UTYO14607 1347 aa16.46■□□□□ 0.23
KDM4B-208ENST00000589104 MCM2P49736 904 aa16.46■□□□□ 0.23
KDM4B-208ENST00000589104 PNMA6EA0A0J9YXQ4 647 aa16.46■□□□□ 0.22
KDM4B-208ENST00000589104 SMARCA5O60264 1052 aaPredicted RBP16.46■□□□□ 0.22
KDM4B-208ENST00000589104 LRSAM1Q6UWE0 723 aa16.46■□□□□ 0.22
KDM4B-208ENST00000589104 ZSCAN30Q86W11 494 aa16.46■□□□□ 0.22
KDM4B-208ENST00000589104 FUCA2Q9BTY2 467 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms