RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 PRIM1P49642 420 aaKnown RBP11.32□□□□□ -0.6
KDM4B-207ENST00000588961 RRP1P56182 461 aaKnown RBP11.32□□□□□ -0.6
KDM4B-207ENST00000588961 SLFN5Q08AF3 891 aa11.32□□□□□ -0.6
KDM4B-207ENST00000588961 AAMPQ13685 434 aa11.32□□□□□ -0.6
KDM4B-207ENST00000588961 AMOTQ4VCS5 1084 aa11.32□□□□□ -0.6
KDM4B-207ENST00000588961 ZNF530Q6P9A1 599 aaPredicted RBP11.32□□□□□ -0.6
KDM4B-207ENST00000588961 WDR63Q8IWG1 891 aa11.32□□□□□ -0.6
KDM4B-207ENST00000588961 IFNL2Q8IZJ0 200 aa11.32□□□□□ -0.6
KDM4B-207ENST00000588961 BCL11BQ9C0K0 894 aaPredicted RBP11.32□□□□□ -0.6
KDM4B-207ENST00000588961 BCL9O00512 1426 aa11.32□□□□□ -0.6
KDM4B-207ENST00000588961 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
KDM4B-207ENST00000588961 PRKAR2BP31323 418 aa11.31□□□□□ -0.6
KDM4B-207ENST00000588961 BAG6P46379 1132 aa11.31□□□□□ -0.6
KDM4B-207ENST00000588961 EZH2Q15910 746 aaKnown RBP11.31□□□□□ -0.6
KDM4B-207ENST00000588961 MTHFSDQ2M296 383 aaKnown RBP11.31□□□□□ -0.6
KDM4B-207ENST00000588961 RUNDC1Q96C34 613 aa11.31□□□□□ -0.6
KDM4B-207ENST00000588961 PHACTR3Q96KR7 559 aa11.31□□□□□ -0.6
KDM4B-207ENST00000588961 RSPH6AQ9H0K4 717 aa11.31□□□□□ -0.6
KDM4B-207ENST00000588961 TNS1Q9HBL0 1735 aaKnown RBP11.31□□□□□ -0.6
KDM4B-207ENST00000588961 NKX1-1Q15270 411 aaPredicted RBP11.3□□□□□ -0.6
KDM4B-207ENST00000588961 C1orf141Q5JVX7 400 aa11.3□□□□□ -0.6
KDM4B-207ENST00000588961 DUSP27Q5VZP5 1158 aa11.3□□□□□ -0.6
KDM4B-207ENST00000588961 FCHSD2O94868 740 aa11.29□□□□□ -0.6
KDM4B-207ENST00000588961 CT47B1P0C2W7 299 aaPredicted RBP11.29□□□□□ -0.6
KDM4B-207ENST00000588961 MPRIPQ6WCQ1 1025 aa11.29□□□□□ -0.6
KDM4B-207ENST00000588961 CAMKK2Q96RR4 588 aa11.29□□□□□ -0.6
KDM4B-207ENST00000588961 EP400Q96L91 3159 aa11.29□□□□□ -0.6
KDM4B-207ENST00000588961 DOT1LQ8TEK3 1739 aa11.29□□□□□ -0.6
KDM4B-207ENST00000588961 NHSQ6T4R5 1651 aa11.28□□□□□ -0.6
KDM4B-207ENST00000588961 PLEKHG2Q9H7P9 1386 aa11.28□□□□□ -0.6
KDM4B-207ENST00000588961 HSP90AB1P08238 724 aaKnown RBP11.27□□□□□ -0.61
KDM4B-207ENST00000588961 AKAP4Q5JQC9 854 aa11.27□□□□□ -0.61
KDM4B-207ENST00000588961 DCAF5Q96JK2 942 aa11.27□□□□□ -0.61
KDM4B-207ENST00000588961 CCDC136Q96JN2 1154 aa11.27□□□□□ -0.61
KDM4B-207ENST00000588961 LGR6Q9HBX8 967 aa11.27□□□□□ -0.61
KDM4B-207ENST00000588961 KAT6BQ8WYB5 2073 aa11.27□□□□□ -0.61
KDM4B-207ENST00000588961 TOGARAM1Q9Y4F4 1720 aa11.26□□□□□ -0.61
KDM4B-207ENST00000588961 APAF1O14727 1248 aa11.26□□□□□ -0.61
KDM4B-207ENST00000588961 PLSCR1O15162 318 aa11.26□□□□□ -0.61
KDM4B-207ENST00000588961 CCDC146Q8IYE0 955 aa11.26□□□□□ -0.61
KDM4B-207ENST00000588961 PROM2Q8N271 834 aa11.26□□□□□ -0.61
KDM4B-207ENST00000588961 PIGBQ92521 554 aa11.26□□□□□ -0.61
KDM4B-207ENST00000588961 PLEKHF1Q96S99 279 aa11.26□□□□□ -0.61
KDM4B-207ENST00000588961 KDM6AO15550 1401 aaPredicted RBP11.26□□□□□ -0.61
KDM4B-207ENST00000588961 BTAF1O14981 1849 aa11.25□□□□□ -0.61
KDM4B-207ENST00000588961 CABP4P57796 275 aa11.25□□□□□ -0.61
KDM4B-207ENST00000588961 WWC1Q8IX03 1113 aa11.25□□□□□ -0.61
KDM4B-207ENST00000588961 GAS2L2Q8NHY3 880 aa11.25□□□□□ -0.61
KDM4B-207ENST00000588961 CDCA7LQ96GN5 454 aa11.25□□□□□ -0.61
KDM4B-207ENST00000588961 TMOD3Q9NYL9 352 aa11.25□□□□□ -0.61
KDM4B-207ENST00000588961 GNAT3A8MTJ3 354 aa11.24□□□□□ -0.61
KDM4B-207ENST00000588961 ERVV-2B6SEH9 535 aa11.24□□□□□ -0.61
KDM4B-207ENST00000588961 RNMTO43148 476 aaKnown RBP11.24□□□□□ -0.61
KDM4B-207ENST00000588961 NEFMP07197 916 aa11.24□□□□□ -0.61
KDM4B-207ENST00000588961 KCNQ4P56696 695 aa11.24□□□□□ -0.61
KDM4B-207ENST00000588961 TXNRD1Q16881 649 aa11.24□□□□□ -0.61
KDM4B-207ENST00000588961 NFATC2IPQ8NCF5 419 aa11.24□□□□□ -0.61
KDM4B-207ENST00000588961 IL16Q14005 1332 aa11.24□□□□□ -0.61
KDM4B-207ENST00000588961 ITGB4P16144 1822 aa11.23□□□□□ -0.61
KDM4B-207ENST00000588961 PDE3AQ14432 1141 aa11.23□□□□□ -0.61
KDM4B-207ENST00000588961 IL17REQ8NFR9 667 aa11.23□□□□□ -0.61
KDM4B-207ENST00000588961 ASAP1Q9ULH1 1129 aa11.23□□□□□ -0.61
KDM4B-207ENST00000588961 RBM19Q9Y4C8 960 aaKnown RBP11.23□□□□□ -0.61
KDM4B-207ENST00000588961 MAPK8IP3Q9UPT6 1336 aa11.23□□□□□ -0.61
KDM4B-207ENST00000588961 MAP3K5Q99683 1374 aa11.23□□□□□ -0.61
KDM4B-207ENST00000588961 PITPNM1O00562 1244 aa11.22□□□□□ -0.61
KDM4B-207ENST00000588961 IRX6P78412 446 aaPredicted RBP11.22□□□□□ -0.61
KDM4B-207ENST00000588961 DCTN1Q14203 1278 aa11.22□□□□□ -0.61
KDM4B-207ENST00000588961 MCM10Q7L590 875 aa11.22□□□□□ -0.61
KDM4B-207ENST00000588961 ATG3Q9NT62 314 aa11.22□□□□□ -0.61
KDM4B-207ENST00000588961 FANCIQ9NVI1 1328 aa11.22□□□□□ -0.61
KDM4B-207ENST00000588961 SENP3-EIF4A1A0A087X0R7 540 aa11.21□□□□□ -0.61
KDM4B-207ENST00000588961 MS4A1P11836 297 aa11.21□□□□□ -0.61
KDM4B-207ENST00000588961 NFE2L2Q16236 605 aa11.21□□□□□ -0.61
KDM4B-207ENST00000588961 B4GALNT3Q6L9W6 998 aa11.21□□□□□ -0.61
KDM4B-207ENST00000588961 CHRDL2Q6WN34 429 aa11.21□□□□□ -0.61
KDM4B-207ENST00000588961 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.61
KDM4B-207ENST00000588961 RTF1Q92541 710 aaKnown RBP11.21□□□□□ -0.61
KDM4B-207ENST00000588961 MYH16Q9H6N6 1097 aa11.21□□□□□ -0.61
KDM4B-207ENST00000588961 SLC52A2Q9HAB3 445 aa11.21□□□□□ -0.61
KDM4B-207ENST00000588961 LRRC4BQ9NT99 713 aa11.21□□□□□ -0.61
KDM4B-207ENST00000588961 RRP7AQ9Y3A4 280 aaKnown RBP11.21□□□□□ -0.61
KDM4B-207ENST00000588961 SCN11AQ9UI33 1791 aa11.21□□□□□ -0.62
KDM4B-207ENST00000588961 PALLDQ8WX93 1383 aa11.2□□□□□ -0.62
KDM4B-207ENST00000588961 PSDA5PKW4 1024 aaPredicted RBP11.2□□□□□ -0.62
KDM4B-207ENST00000588961 TCERG1O14776 1098 aaKnown RBP11.2□□□□□ -0.62
KDM4B-207ENST00000588961 NEUROD2Q15784 382 aa11.2□□□□□ -0.62
KDM4B-207ENST00000588961 SMARCC1Q92922 1105 aaPredicted RBP11.2□□□□□ -0.62
KDM4B-207ENST00000588961 ZNF428Q96B54 188 aa11.2□□□□□ -0.62
KDM4B-207ENST00000588961 CCNL1Q9UK58 526 aaPredicted RBP11.2□□□□□ -0.62
KDM4B-207ENST00000588961 SALL2Q9Y467 1007 aaPredicted RBP11.2□□□□□ -0.62
KDM4B-207ENST00000588961 RREB1Q92766 1687 aa11.2□□□□□ -0.62
KDM4B-207ENST00000588961 NUP188Q5SRE5 1749 aa11.19□□□□□ -0.62
KDM4B-207ENST00000588961 TMPOP42166 694 aaKnown RBP11.19□□□□□ -0.62
KDM4B-207ENST00000588961 RIPK4P57078 832 aa11.19□□□□□ -0.62
KDM4B-207ENST00000588961 TEFQ10587 303 aa11.19□□□□□ -0.62
KDM4B-207ENST00000588961 SLC39A6Q13433 755 aa11.19□□□□□ -0.62
KDM4B-207ENST00000588961 R3HDM1Q15032 1099 aaKnown RBP11.19□□□□□ -0.62
KDM4B-207ENST00000588961 VIRMAQ69YN4 1812 aaKnown RBP11.19□□□□□ -0.62
KDM4B-207ENST00000588961 RGPD3A6NKT7 1758 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms