RNA–Protein interactions for RNA: ENST00000588957.5

GFAP-215, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-215ENST00000588957 FAM182BQ5T319 152 aa18.65■□□□□ 0.58
GFAP-215ENST00000588957 PIGBQ92521 554 aa18.65■□□□□ 0.58
GFAP-215ENST00000588957 TSPYL4Q9UJ04 414 aa18.65■□□□□ 0.58
GFAP-215ENST00000588957 CHL1O00533 1208 aa18.64■□□□□ 0.57
GFAP-215ENST00000588957 TRIM37O94972 964 aa18.64■□□□□ 0.57
GFAP-215ENST00000588957 ZNF521Q96K83 1311 aa18.64■□□□□ 0.57
GFAP-215ENST00000588957 ZNF790Q6PG37 636 aa18.63■□□□□ 0.57
GFAP-215ENST00000588957 THUMPD2Q9BTF0 503 aaKnown RBP18.63■□□□□ 0.57
GFAP-215ENST00000588957 LAS1LQ9Y4W2 734 aaKnown RBP18.63■□□□□ 0.57
GFAP-215ENST00000588957 KAT6BQ8WYB5 2073 aa18.62■□□□□ 0.57
GFAP-215ENST00000588957 KCNQ2O43526 872 aa18.62■□□□□ 0.57
GFAP-215ENST00000588957 ZNF853P0CG23 659 aa18.62■□□□□ 0.57
GFAP-215ENST00000588957 TEX13AQ9BXU3 409 aaPredicted RBP18.62■□□□□ 0.57
GFAP-215ENST00000588957 SHANK3Q9BYB0 1731 aa18.62■□□□□ 0.57
GFAP-215ENST00000588957 MRC1P22897 1456 aa18.61■□□□□ 0.57
GFAP-215ENST00000588957 SOS1Q07889 1333 aaPredicted RBP18.61■□□□□ 0.57
GFAP-215ENST00000588957 PLSCR1O15162 318 aa18.61■□□□□ 0.57
GFAP-215ENST00000588957 FMNL2Q96PY5 1086 aa18.61■□□□□ 0.57
GFAP-215ENST00000588957 BRWD3Q6RI45 1802 aa18.6■□□□□ 0.57
GFAP-215ENST00000588957 ADAMTS7Q9UKP4 1686 aa18.6■□□□□ 0.57
GFAP-215ENST00000588957 BAG6P46379 1132 aa18.6■□□□□ 0.57
GFAP-215ENST00000588957 VSIG10Q8N0Z9 540 aa18.6■□□□□ 0.57
GFAP-215ENST00000588957 APBA3O96018 575 aa18.59■□□□□ 0.57
GFAP-215ENST00000588957 ATG3Q9NT62 314 aa18.59■□□□□ 0.57
GFAP-215ENST00000588957 SCN11AQ9UI33 1791 aa18.59■□□□□ 0.57
GFAP-215ENST00000588957 SLFN5Q08AF3 891 aa18.58■□□□□ 0.56
GFAP-215ENST00000588957 SLC27A3Q5K4L6 730 aa18.58■□□□□ 0.56
GFAP-215ENST00000588957 ASAP1Q9ULH1 1129 aa18.58■□□□□ 0.56
GFAP-215ENST00000588957 DLG5Q8TDM6 1919 aa18.58■□□□□ 0.56
GFAP-215ENST00000588957 SENP3-EIF4A1A0A087X0R7 540 aa18.57■□□□□ 0.56
GFAP-215ENST00000588957 SOCS7O14512 581 aa18.57■□□□□ 0.56
GFAP-215ENST00000588957 YTHDC1Q96MU7 727 aaKnown RBP18.57■□□□□ 0.56
GFAP-215ENST00000588957 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
GFAP-215ENST00000588957 HOXB7P09629 217 aa18.56■□□□□ 0.56
GFAP-215ENST00000588957 SNRPA1P09661 255 aaKnown RBP18.56■□□□□ 0.56
GFAP-215ENST00000588957 CT47B1P0C2W7 299 aaPredicted RBP18.56■□□□□ 0.56
GFAP-215ENST00000588957 PALLDQ8WX93 1383 aa18.55■□□□□ 0.56
GFAP-215ENST00000588957 EIF4A1P60842 406 aaKnown RBP18.55■□□□□ 0.56
GFAP-215ENST00000588957 SLC39A6Q13433 755 aa18.55■□□□□ 0.56
GFAP-215ENST00000588957 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
GFAP-215ENST00000588957 MIS18AQ9NYP9 233 aa18.55■□□□□ 0.56
GFAP-215ENST00000588957 LOC102724428A0A0B4J2F2 783 aa18.54■□□□□ 0.56
GFAP-215ENST00000588957 PTCD1O75127 700 aaKnown RBP18.54■□□□□ 0.56
GFAP-215ENST00000588957 STARD3NLO95772 234 aa18.54■□□□□ 0.56
GFAP-215ENST00000588957 SIK1P57059 783 aa18.54■□□□□ 0.56
GFAP-215ENST00000588957 ZNF428Q96B54 188 aa18.54■□□□□ 0.56
GFAP-215ENST00000588957 NHSQ6T4R5 1651 aa18.54■□□□□ 0.56
GFAP-215ENST00000588957 TRMT2AQ8IZ69 625 aaKnown RBP18.53■□□□□ 0.56
GFAP-215ENST00000588957 ZNF496Q96IT1 587 aaPredicted RBP18.53■□□□□ 0.56
GFAP-215ENST00000588957 FANCIQ9NVI1 1328 aa18.52■□□□□ 0.56
GFAP-215ENST00000588957 DOT1LQ8TEK3 1739 aa18.52■□□□□ 0.56
GFAP-215ENST00000588957 ATP6V1AP38606 617 aa18.52■□□□□ 0.56
GFAP-215ENST00000588957 HEG1Q9ULI3 1381 aa18.52■□□□□ 0.55
GFAP-215ENST00000588957 GIGYF1O75420 1035 aaPredicted RBP18.51■□□□□ 0.55
GFAP-215ENST00000588957 CCNL1Q9UK58 526 aaPredicted RBP18.51■□□□□ 0.55
GFAP-215ENST00000588957 DUSP27Q5VZP5 1158 aa18.5■□□□□ 0.55
GFAP-215ENST00000588957 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
GFAP-215ENST00000588957 UPF1Q92900 1129 aaKnown RBP eCLIP18.5■□□□□ 0.55
GFAP-215ENST00000588957 CDCA7LQ96GN5 454 aa18.5■□□□□ 0.55
GFAP-215ENST00000588957 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
GFAP-215ENST00000588957 ITGB4P16144 1822 aa18.49■□□□□ 0.55
GFAP-215ENST00000588957 SBF2Q86WG5 1849 aa18.49■□□□□ 0.55
GFAP-215ENST00000588957 KCNQ3O43525 872 aa18.49■□□□□ 0.55
GFAP-215ENST00000588957 TXNRD1Q16881 649 aa18.49■□□□□ 0.55
GFAP-215ENST00000588957 NPM2Q86SE8 214 aaKnown RBP18.49■□□□□ 0.55
GFAP-215ENST00000588957 TSR2Q969E8 191 aaKnown RBP18.49■□□□□ 0.55
GFAP-215ENST00000588957 SPINK5Q9NQ38 1064 aaPredicted RBP18.49■□□□□ 0.55
GFAP-215ENST00000588957 TWISTNBQ3B726 338 aaPredicted RBP18.48■□□□□ 0.55
GFAP-215ENST00000588957 ERBB4Q15303 1308 aa18.48■□□□□ 0.55
GFAP-215ENST00000588957 EXOSC9Q06265 439 aaKnown RBP18.47■□□□□ 0.55
GFAP-215ENST00000588957 RC3H1Q5TC82 1133 aaKnown RBP18.47■□□□□ 0.55
GFAP-215ENST00000588957 CCDC30Q5VVM6 783 aa18.47■□□□□ 0.55
GFAP-215ENST00000588957 CAMKK2Q96RR4 588 aa18.47■□□□□ 0.55
GFAP-215ENST00000588957 SIPA1L3O60292 1781 aaPredicted RBP18.46■□□□□ 0.55
GFAP-215ENST00000588957 EN1Q05925 392 aaPredicted RBP18.45■□□□□ 0.54
GFAP-215ENST00000588957 NBPF14Q5TI25 921 aa18.45■□□□□ 0.54
GFAP-215ENST00000588957 C8orf58Q8NAV2 365 aa18.45■□□□□ 0.54
GFAP-215ENST00000588957 STK31Q9BXU1 1019 aa18.45■□□□□ 0.54
GFAP-215ENST00000588957 BTAF1O14981 1849 aa18.44■□□□□ 0.54
GFAP-215ENST00000588957 VIRMAQ69YN4 1812 aaKnown RBP18.44■□□□□ 0.54
GFAP-215ENST00000588957 HDGFL1Q5TGJ6 251 aa18.44■□□□□ 0.54
GFAP-215ENST00000588957 DNAJC10Q8IXB1 793 aa18.44■□□□□ 0.54
GFAP-215ENST00000588957 ELL2O00472 640 aaPredicted RBP18.43■□□□□ 0.54
GFAP-215ENST00000588957 VAMP4O75379 141 aa18.43■□□□□ 0.54
GFAP-215ENST00000588957 EIF2S2P20042 333 aaKnown RBP18.43■□□□□ 0.54
GFAP-215ENST00000588957 DBF4Q9UBU7 674 aaPredicted RBP18.43■□□□□ 0.54
GFAP-215ENST00000588957 CYP19A1P11511 503 aaPredicted RBP18.42■□□□□ 0.54
GFAP-215ENST00000588957 EZH2Q15910 746 aaKnown RBP18.42■□□□□ 0.54
GFAP-215ENST00000588957 FLAD1Q8NFF5 587 aa18.42■□□□□ 0.54
GFAP-215ENST00000588957 SLC4A9Q96Q91 983 aa18.42■□□□□ 0.54
GFAP-215ENST00000588957 USP16Q9Y5T5 823 aa18.42■□□□□ 0.54
GFAP-215ENST00000588957 KCPQ6ZWJ8 1503 aa18.42■□□□□ 0.54
GFAP-215ENST00000588957 CNTNAP4Q9C0A0 1308 aa18.42■□□□□ 0.54
GFAP-215ENST00000588957 KDM3BQ7LBC6 1761 aa18.41■□□□□ 0.54
GFAP-215ENST00000588957 ALDH1L2Q3SY69 923 aa18.41■□□□□ 0.54
GFAP-215ENST00000588957 DEFB132Q7Z7B7 95 aa18.41■□□□□ 0.54
GFAP-215ENST00000588957 PROM2Q8N271 834 aa18.41■□□□□ 0.54
GFAP-215ENST00000588957 AK7Q96M32 723 aa18.41■□□□□ 0.54
GFAP-215ENST00000588957 CCDC87Q9NVE4 849 aa18.41■□□□□ 0.54
GFAP-215ENST00000588957 HYPKQ9NX55 129 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms