RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 SLC52A2Q9HAB3 445 aa26.83■■□□□ 1.89
DDX39A-207ENST00000588542 ADAMTS8Q9UP79 889 aa26.83■■□□□ 1.89
DDX39A-207ENST00000588542 NBPF14Q5TI25 921 aa26.81■■□□□ 1.88
DDX39A-207ENST00000588542 CEMIPQ8WUJ3 1361 aa26.81■■□□□ 1.88
DDX39A-207ENST00000588542 ZNF831Q5JPB2 1677 aa26.8■■□□□ 1.88
DDX39A-207ENST00000588542 NEFMP07197 916 aa26.8■■□□□ 1.88
DDX39A-207ENST00000588542 CCNL1Q9UK58 526 aaPredicted RBP26.8■■□□□ 1.88
DDX39A-207ENST00000588542 TUBGCP6Q96RT7 1819 aa26.79■■□□□ 1.88
DDX39A-207ENST00000588542 PSDA5PKW4 1024 aaPredicted RBP26.79■■□□□ 1.88
DDX39A-207ENST00000588542 R3HDM1Q15032 1099 aaKnown RBP26.79■■□□□ 1.88
DDX39A-207ENST00000588542 NFE2L2Q16236 605 aa26.78■■□□□ 1.88
DDX39A-207ENST00000588542 MAPK8IP3Q9UPT6 1336 aa26.78■■□□□ 1.88
DDX39A-207ENST00000588542 UBR2Q8IWV8 1755 aa26.77■■□□□ 1.88
DDX39A-207ENST00000588542 CCDC146Q8IYE0 955 aa26.77■■□□□ 1.88
DDX39A-207ENST00000588542 QSER1Q2KHR3 1735 aa26.76■■□□□ 1.88
DDX39A-207ENST00000588542 LOC102724428A0A0B4J2F2 783 aa26.76■■□□□ 1.87
DDX39A-207ENST00000588542 HTATSF1O43719 755 aaKnown RBP26.76■■□□□ 1.87
DDX39A-207ENST00000588542 SIK1P57059 783 aa26.76■■□□□ 1.87
DDX39A-207ENST00000588542 MCM10Q7L590 875 aa26.75■■□□□ 1.87
DDX39A-207ENST00000588542 MRS2Q9HD23 443 aa26.75■■□□□ 1.87
DDX39A-207ENST00000588542 DCTN1Q14203 1278 aa26.74■■□□□ 1.87
DDX39A-207ENST00000588542 SLC15A2Q16348 729 aa26.74■■□□□ 1.87
DDX39A-207ENST00000588542 ZNF827Q17R98 1081 aa26.74■■□□□ 1.87
DDX39A-207ENST00000588542 PNISRQ8TF01 805 aaKnown RBP26.74■■□□□ 1.87
DDX39A-207ENST00000588542 RTF1Q92541 710 aaKnown RBP26.74■■□□□ 1.87
DDX39A-207ENST00000588542 AKT1S1Q96B36 256 aa26.74■■□□□ 1.87
DDX39A-207ENST00000588542 RUNDC1Q96C34 613 aa26.74■■□□□ 1.87
DDX39A-207ENST00000588542 SLC4A9Q96Q91 983 aa26.74■■□□□ 1.87
DDX39A-207ENST00000588542 CASZ1Q86V15 1759 aa26.74■■□□□ 1.87
DDX39A-207ENST00000588542 C4BP0C0L5 1744 aa26.73■■□□□ 1.87
DDX39A-207ENST00000588542 COL5A3P25940 1745 aaPredicted RBP26.73■■□□□ 1.87
DDX39A-207ENST00000588542 CICQ96RK0 1608 aaPredicted RBP26.73■■□□□ 1.87
DDX39A-207ENST00000588542 TEFQ10587 303 aa26.73■■□□□ 1.87
DDX39A-207ENST00000588542 STK32BQ9NY57 414 aa26.73■■□□□ 1.87
DDX39A-207ENST00000588542 TJP1Q07157 1748 aa26.73■■□□□ 1.87
DDX39A-207ENST00000588542 KCPQ6ZWJ8 1503 aa26.72■■□□□ 1.87
DDX39A-207ENST00000588542 TMPOP42166 694 aaKnown RBP26.71■■□□□ 1.87
DDX39A-207ENST00000588542 SLC39A6Q13433 755 aa26.71■■□□□ 1.87
DDX39A-207ENST00000588542 ITPK1Q13572 414 aa26.71■■□□□ 1.87
DDX39A-207ENST00000588542 RBM42Q9BTD8 480 aaKnown RBP26.7■■□□□ 1.86
DDX39A-207ENST00000588542 PTCD1O75127 700 aaKnown RBP26.69■■□□□ 1.86
DDX39A-207ENST00000588542 ATP6V1AP38606 617 aa26.69■■□□□ 1.86
DDX39A-207ENST00000588542 UBR3Q6ZT12 1888 aa26.69■■□□□ 1.86
DDX39A-207ENST00000588542 RIPK4P57078 832 aa26.68■■□□□ 1.86
DDX39A-207ENST00000588542 LINC00116Q8NCU8 138 aa26.68■■□□□ 1.86
DDX39A-207ENST00000588542 RRP7AQ9Y3A4 280 aaKnown RBP26.67■■□□□ 1.86
DDX39A-207ENST00000588542 MYH14Q7Z406 1995 aaKnown RBP26.67■■□□□ 1.86
DDX39A-207ENST00000588542 PDGFDQ9GZP0 370 aaPredicted RBP26.66■■□□□ 1.86
DDX39A-207ENST00000588542 KDM3BQ7LBC6 1761 aa26.66■■□□□ 1.86
DDX39A-207ENST00000588542 THUMPD2Q9BTF0 503 aaKnown RBP26.65■■□□□ 1.86
DDX39A-207ENST00000588542 ZNF790Q6PG37 636 aa26.64■■□□□ 1.86
DDX39A-207ENST00000588542 BTBD11A6QL63 1104 aa26.63■■□□□ 1.85
DDX39A-207ENST00000588542 HMGB2P26583 209 aaKnown RBP26.63■■□□□ 1.85
DDX39A-207ENST00000588542 NEUROD2Q15784 382 aa26.63■■□□□ 1.85
DDX39A-207ENST00000588542 KCNQ3O43525 872 aa26.62■■□□□ 1.85
DDX39A-207ENST00000588542 TAF7Q15545 349 aaPredicted RBP26.62■■□□□ 1.85
DDX39A-207ENST00000588542 TFCP2L1Q9NZI6 479 aa26.62■■□□□ 1.85
DDX39A-207ENST00000588542 TRIM35Q9UPQ4 493 aa26.62■■□□□ 1.85
DDX39A-207ENST00000588542 SRCAPQ6ZRS2 3230 aa26.62■■□□□ 1.85
DDX39A-207ENST00000588542 PNPLA7Q6ZV29 1317 aa26.62■■□□□ 1.85
DDX39A-207ENST00000588542 APAF1O14727 1248 aa26.61■■□□□ 1.85
DDX39A-207ENST00000588542 DIEXFQ68CQ4 756 aaKnown RBP26.61■■□□□ 1.85
DDX39A-207ENST00000588542 TTC5Q8N0Z6 440 aa26.61■■□□□ 1.85
DDX39A-207ENST00000588542 LMOD3Q0VAK6 560 aa26.6■■□□□ 1.85
DDX39A-207ENST00000588542 LRP5O75197 1615 aa26.59■■□□□ 1.85
DDX39A-207ENST00000588542 AMIGO3Q86WK7 504 aa26.59■■□□□ 1.85
DDX39A-207ENST00000588542 ZNF496Q96IT1 587 aaPredicted RBP26.59■■□□□ 1.85
DDX39A-207ENST00000588542 VSIG10Q8N0Z9 540 aa26.58■■□□□ 1.85
DDX39A-207ENST00000588542 AK7Q96M32 723 aa26.58■■□□□ 1.85
DDX39A-207ENST00000588542 MIS18AQ9NYP9 233 aa26.58■■□□□ 1.85
DDX39A-207ENST00000588542 DNAJC10Q8IXB1 793 aa26.57■■□□□ 1.84
DDX39A-207ENST00000588542 CNTNAP4Q9C0A0 1308 aa26.57■■□□□ 1.84
DDX39A-207ENST00000588542 HEG1Q9ULI3 1381 aa26.57■■□□□ 1.84
DDX39A-207ENST00000588542 RC3H1Q5TC82 1133 aaKnown RBP26.56■■□□□ 1.84
DDX39A-207ENST00000588542 COL24A1Q17RW2 1714 aa26.56■■□□□ 1.84
DDX39A-207ENST00000588542 SMIM5Q71RC9 77 aa26.55■■□□□ 1.84
DDX39A-207ENST00000588542 FMNL2Q96PY5 1086 aa26.55■■□□□ 1.84
DDX39A-207ENST00000588542 CRKLP46109 303 aaKnown RBP26.54■■□□□ 1.84
DDX39A-207ENST00000588542 COL23A1Q86Y22 540 aaPredicted RBP26.54■■□□□ 1.84
DDX39A-207ENST00000588542 FAM9BQ8IZU0 186 aa26.54■■□□□ 1.84
DDX39A-207ENST00000588542 CCER2I3L3R5 266 aa26.53■■□□□ 1.84
DDX39A-207ENST00000588542 GNPATO15228 680 aa26.53■■□□□ 1.84
DDX39A-207ENST00000588542 CYP19A1P11511 503 aaPredicted RBP26.53■■□□□ 1.84
DDX39A-207ENST00000588542 C4AP0C0L4 1744 aa26.52■■□□□ 1.84
DDX39A-207ENST00000588542 ZBTB7AO95365 584 aa26.51■■□□□ 1.83
DDX39A-207ENST00000588542 SSFA2P28290 1259 aa26.51■■□□□ 1.83
DDX39A-207ENST00000588542 INTS5Q6P9B9 1019 aaKnown RBP26.51■■□□□ 1.83
DDX39A-207ENST00000588542 SENP3-EIF4A1A0A087X0R7 540 aa26.5■■□□□ 1.83
DDX39A-207ENST00000588542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.5■■□□□ 1.83
DDX39A-207ENST00000588542 FLAD1Q8NFF5 587 aa26.5■■□□□ 1.83
DDX39A-207ENST00000588542 LAMB4A4D0S4 1761 aa26.5■■□□□ 1.83
DDX39A-207ENST00000588542 RPS6KA4O75676 772 aa26.49■■□□□ 1.83
DDX39A-207ENST00000588542 PHF14O94880 888 aa26.49■■□□□ 1.83
DDX39A-207ENST00000588542 MIER1Q8N108 512 aa26.48■■□□□ 1.83
DDX39A-207ENST00000588542 SLC16A10Q8TF71 515 aa26.48■■□□□ 1.83
DDX39A-207ENST00000588542 MTFR1LQ9H019 292 aa26.48■■□□□ 1.83
DDX39A-207ENST00000588542 SPON1Q9HCB6 807 aa26.48■■□□□ 1.83
DDX39A-207ENST00000588542 CCDC87Q9NVE4 849 aa26.48■■□□□ 1.83
DDX39A-207ENST00000588542 BABAM1Q9NWV8 329 aa26.48■■□□□ 1.83
DDX39A-207ENST00000588542 RTCBQ9Y3I0 505 aaKnown RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 514.4 ms