RNA–Protein interactions for RNA: ENST00000588520.1

RFX1-203, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-203ENST00000588520 TAF1LQ8IZX4 1826 aa22.96■■□□□ 1.27
RFX1-203ENST00000588520 KCNQ4P56696 695 aa22.95■■□□□ 1.26
RFX1-203ENST00000588520 PNPLA7Q6ZV29 1317 aa22.94■■□□□ 1.26
RFX1-203ENST00000588520 RNMTO43148 476 aaKnown RBP22.94■■□□□ 1.26
RFX1-203ENST00000588520 PRKAR2BP31323 418 aa22.94■■□□□ 1.26
RFX1-203ENST00000588520 SLC52A2Q9HAB3 445 aa22.94■■□□□ 1.26
RFX1-203ENST00000588520 MAP3K5Q99683 1374 aa22.93■■□□□ 1.26
RFX1-203ENST00000588520 NFATC2IPQ8NCF5 419 aa22.93■■□□□ 1.26
RFX1-203ENST00000588520 PDGFDQ9GZP0 370 aaPredicted RBP22.93■■□□□ 1.26
RFX1-203ENST00000588520 C4BP0C0L5 1744 aa22.93■■□□□ 1.26
RFX1-203ENST00000588520 MYBBP1AQ9BQG0 1328 aaKnown RBP22.92■■□□□ 1.26
RFX1-203ENST00000588520 GNAT3A8MTJ3 354 aa22.92■■□□□ 1.26
RFX1-203ENST00000588520 ATP6V1AP38606 617 aa22.92■■□□□ 1.26
RFX1-203ENST00000588520 ZBTB7AO95365 584 aa22.91■■□□□ 1.26
RFX1-203ENST00000588520 AK7Q96M32 723 aa22.91■■□□□ 1.26
RFX1-203ENST00000588520 PNNQ9H307 717 aaKnown RBP22.91■■□□□ 1.26
RFX1-203ENST00000588520 TUBGCP6Q96RT7 1819 aa22.9■■□□□ 1.26
RFX1-203ENST00000588520 NEFMP07197 916 aa22.9■■□□□ 1.26
RFX1-203ENST00000588520 PPP1R1BQ9UD71 204 aaPredicted RBP22.9■■□□□ 1.26
RFX1-203ENST00000588520 LGR6Q9HBX8 967 aa22.89■■□□□ 1.25
RFX1-203ENST00000588520 CICQ96RK0 1608 aaPredicted RBP22.89■■□□□ 1.25
RFX1-203ENST00000588520 PTGER2P43116 358 aa22.88■■□□□ 1.25
RFX1-203ENST00000588520 VIRMAQ69YN4 1812 aaKnown RBP22.87■■□□□ 1.25
RFX1-203ENST00000588520 SSFA2P28290 1259 aa22.87■■□□□ 1.25
RFX1-203ENST00000588520 ITPK1Q13572 414 aa22.87■■□□□ 1.25
RFX1-203ENST00000588520 PHACTR3Q96KR7 559 aa22.87■■□□□ 1.25
RFX1-203ENST00000588520 SGIP1Q9BQI5 828 aa22.87■■□□□ 1.25
RFX1-203ENST00000588520 RBM42Q9BTD8 480 aaKnown RBP22.87■■□□□ 1.25
RFX1-203ENST00000588520 COL24A1Q17RW2 1714 aa22.86■■□□□ 1.25
RFX1-203ENST00000588520 HTATSF1O43719 755 aaKnown RBP22.86■■□□□ 1.25
RFX1-203ENST00000588520 RC3H1Q5TC82 1133 aaKnown RBP22.86■■□□□ 1.25
RFX1-203ENST00000588520 LINC00116Q8NCU8 138 aa22.86■■□□□ 1.25
RFX1-203ENST00000588520 ATF5Q9Y2D1 282 aaPredicted RBP22.86■■□□□ 1.25
RFX1-203ENST00000588520 CEMIPQ8WUJ3 1361 aa22.86■■□□□ 1.25
RFX1-203ENST00000588520 CNTNAP4Q9C0A0 1308 aa22.85■■□□□ 1.25
RFX1-203ENST00000588520 TEFQ10587 303 aa22.85■■□□□ 1.25
RFX1-203ENST00000588520 COL23A1Q86Y22 540 aaPredicted RBP22.85■■□□□ 1.25
RFX1-203ENST00000588520 UBR3Q6ZT12 1888 aa22.84■■□□□ 1.25
RFX1-203ENST00000588520 POLD1P28340 1107 aa22.84■■□□□ 1.25
RFX1-203ENST00000588520 SLC4A9Q96Q91 983 aa22.84■■□□□ 1.25
RFX1-203ENST00000588520 PRKRIP1Q9H875 184 aaPredicted RBP22.84■■□□□ 1.25
RFX1-203ENST00000588520 COL5A3P25940 1745 aaPredicted RBP22.83■■□□□ 1.25
RFX1-203ENST00000588520 ZNF316A6NFI3 1004 aaPredicted RBP22.83■■□□□ 1.25
RFX1-203ENST00000588520 IL17REQ8NFR9 667 aa22.83■■□□□ 1.25
RFX1-203ENST00000588520 RTF1Q92541 710 aaKnown RBP22.83■■□□□ 1.25
RFX1-203ENST00000588520 PTCD1O75127 700 aaKnown RBP22.82■■□□□ 1.24
RFX1-203ENST00000588520 ADRA2BP18089 450 aa22.82■■□□□ 1.24
RFX1-203ENST00000588520 VSIG10Q8N0Z9 540 aa22.82■■□□□ 1.24
RFX1-203ENST00000588520 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.81■■□□□ 1.24
RFX1-203ENST00000588520 GNPATO15228 680 aa22.81■■□□□ 1.24
RFX1-203ENST00000588520 MSH5O43196 834 aa22.81■■□□□ 1.24
RFX1-203ENST00000588520 TTC5Q8N0Z6 440 aa22.8■■□□□ 1.24
RFX1-203ENST00000588520 ARXQ96QS3 562 aa22.8■■□□□ 1.24
RFX1-203ENST00000588520 PLEKHF1Q96S99 279 aa22.8■■□□□ 1.24
RFX1-203ENST00000588520 RTCBQ9Y3I0 505 aaKnown RBP22.8■■□□□ 1.24
RFX1-203ENST00000588520 SIPA1L3O60292 1781 aaPredicted RBP22.79■■□□□ 1.24
RFX1-203ENST00000588520 MAPK8IP3Q9UPT6 1336 aa22.79■■□□□ 1.24
RFX1-203ENST00000588520 KCPQ6ZWJ8 1503 aa22.78■■□□□ 1.24
RFX1-203ENST00000588520 UBR2Q8IWV8 1755 aa22.78■■□□□ 1.24
RFX1-203ENST00000588520 TJP1Q07157 1748 aa22.77■■□□□ 1.24
RFX1-203ENST00000588520 RPS6KA4O75676 772 aa22.77■■□□□ 1.24
RFX1-203ENST00000588520 SLC39A6Q13433 755 aa22.76■■□□□ 1.23
RFX1-203ENST00000588520 TRAPPC3LQ5T215 181 aa22.76■■□□□ 1.23
RFX1-203ENST00000588520 ZNF790Q6PG37 636 aa22.76■■□□□ 1.23
RFX1-203ENST00000588520 PHF14O94880 888 aa22.75■■□□□ 1.23
RFX1-203ENST00000588520 NFE2L2Q16236 605 aa22.75■■□□□ 1.23
RFX1-203ENST00000588520 TEX13AQ9BXU3 409 aaPredicted RBP22.75■■□□□ 1.23
RFX1-203ENST00000588520 CRKLP46109 303 aaKnown RBP22.74■■□□□ 1.23
RFX1-203ENST00000588520 AMIGO3Q86WK7 504 aa22.74■■□□□ 1.23
RFX1-203ENST00000588520 BTBD11A6QL63 1104 aa22.73■■□□□ 1.23
RFX1-203ENST00000588520 WDR43Q15061 677 aaKnown RBP eCLIP22.73■■□□□ 1.23
RFX1-203ENST00000588520 DNAJC10Q8IXB1 793 aa22.72■■□□□ 1.23
RFX1-203ENST00000588520 FMNL2Q96PY5 1086 aa22.72■■□□□ 1.23
RFX1-203ENST00000588520 SYT17Q9BSW7 474 aa22.72■■□□□ 1.23
RFX1-203ENST00000588520 FHDC1Q9C0D6 1143 aaPredicted RBP22.72■■□□□ 1.23
RFX1-203ENST00000588520 HEG1Q9ULI3 1381 aa22.72■■□□□ 1.23
RFX1-203ENST00000588520 MYH14Q7Z406 1995 aaKnown RBP22.71■■□□□ 1.23
RFX1-203ENST00000588520 DCAF8L1A6NGE4 600 aa22.71■■□□□ 1.23
RFX1-203ENST00000588520 STARD3NLO95772 234 aa22.71■■□□□ 1.23
RFX1-203ENST00000588520 MCM10Q7L590 875 aa22.71■■□□□ 1.23
RFX1-203ENST00000588520 CCDC87Q9NVE4 849 aa22.71■■□□□ 1.23
RFX1-203ENST00000588520 CYP19A1P11511 503 aaPredicted RBP22.7■■□□□ 1.22
RFX1-203ENST00000588520 PNISRQ8TF01 805 aaKnown RBP22.7■■□□□ 1.22
RFX1-203ENST00000588520 ZNF496Q96IT1 587 aaPredicted RBP22.7■■□□□ 1.22
RFX1-203ENST00000588520 RFC4P35249 363 aa22.69■■□□□ 1.22
RFX1-203ENST00000588520 LMOD3Q0VAK6 560 aa22.69■■□□□ 1.22
RFX1-203ENST00000588520 TAF7Q15545 349 aaPredicted RBP22.69■■□□□ 1.22
RFX1-203ENST00000588520 INTS5Q6P9B9 1019 aaKnown RBP22.69■■□□□ 1.22
RFX1-203ENST00000588520 NLGN1Q8N2Q7 840 aa22.69■■□□□ 1.22
RFX1-203ENST00000588520 ARHGEF1Q92888 912 aaKnown RBP22.69■■□□□ 1.22
RFX1-203ENST00000588520 DLG5Q8TDM6 1919 aa22.68■■□□□ 1.22
RFX1-203ENST00000588520 MSL1Q68DK7 614 aa22.67■■□□□ 1.22
RFX1-203ENST00000588520 SOS1Q07889 1333 aaPredicted RBP22.66■■□□□ 1.22
RFX1-203ENST00000588520 DCTN1Q14203 1278 aa22.66■■□□□ 1.22
RFX1-203ENST00000588520 RUNDC1Q96C34 613 aa22.66■■□□□ 1.22
RFX1-203ENST00000588520 CD2APQ9Y5K6 639 aa22.65■■□□□ 1.22
RFX1-203ENST00000588520 C4AP0C0L4 1744 aa22.65■■□□□ 1.22
RFX1-203ENST00000588520 ANP32CO43423 234 aa22.64■■□□□ 1.21
RFX1-203ENST00000588520 TMPOP42166 694 aaKnown RBP22.64■■□□□ 1.21
RFX1-203ENST00000588520 SMIM5Q71RC9 77 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms