RNA–Protein interactions for RNA: ENST00000588094.1

ZNF404-203, Transcript of zinc finger protein 404, humanhuman

TSL 3

Gene ZNF404, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-203ENST00000588094 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
ZNF404-203ENST00000588094 RTF1Q92541 710 aaKnown RBP12.78□□□□□ -0.36
ZNF404-203ENST00000588094 LGR6Q9HBX8 967 aa12.78□□□□□ -0.36
ZNF404-203ENST00000588094 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
ZNF404-203ENST00000588094 CCDC27Q2M243 656 aa12.77□□□□□ -0.37
ZNF404-203ENST00000588094 PAPPAQ13219 1627 aa12.77□□□□□ -0.37
ZNF404-203ENST00000588094 KDM3BQ7LBC6 1761 aa12.76□□□□□ -0.37
ZNF404-203ENST00000588094 ILDR2Q71H61 639 aa12.76□□□□□ -0.37
ZNF404-203ENST00000588094 MCM10Q7L590 875 aa12.76□□□□□ -0.37
ZNF404-203ENST00000588094 LY75O60449 1722 aa12.76□□□□□ -0.37
ZNF404-203ENST00000588094 RGPD3A6NKT7 1758 aaPredicted RBP12.76□□□□□ -0.37
ZNF404-203ENST00000588094 RGPD4Q7Z3J3 1758 aa12.76□□□□□ -0.37
ZNF404-203ENST00000588094 UBR2Q8IWV8 1755 aa12.76□□□□□ -0.37
ZNF404-203ENST00000588094 KCNQ2O43526 872 aa12.75□□□□□ -0.37
ZNF404-203ENST00000588094 PRIM1P49642 420 aaKnown RBP12.75□□□□□ -0.37
ZNF404-203ENST00000588094 DCTN1Q14203 1278 aa12.75□□□□□ -0.37
ZNF404-203ENST00000588094 ACSBG1Q96GR2 724 aa12.75□□□□□ -0.37
ZNF404-203ENST00000588094 BCL11BQ9C0K0 894 aaPredicted RBP12.75□□□□□ -0.37
ZNF404-203ENST00000588094 SLC52A2Q9HAB3 445 aa12.75□□□□□ -0.37
ZNF404-203ENST00000588094 CABP4P57796 275 aa12.74□□□□□ -0.37
ZNF404-203ENST00000588094 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
ZNF404-203ENST00000588094 NFATC2IPQ8NCF5 419 aa12.74□□□□□ -0.37
ZNF404-203ENST00000588094 SENP3-EIF4A1A0A087X0R7 540 aa12.73□□□□□ -0.37
ZNF404-203ENST00000588094 TRIM37O94972 964 aa12.73□□□□□ -0.37
ZNF404-203ENST00000588094 TEFQ10587 303 aa12.73□□□□□ -0.37
ZNF404-203ENST00000588094 PTF1AQ7RTS3 328 aa12.73□□□□□ -0.37
ZNF404-203ENST00000588094 PIGBQ92521 554 aa12.73□□□□□ -0.37
ZNF404-203ENST00000588094 SYTL4Q96C24 671 aaPredicted RBP12.73□□□□□ -0.37
ZNF404-203ENST00000588094 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
ZNF404-203ENST00000588094 TMOD3Q9NYL9 352 aa12.73□□□□□ -0.37
ZNF404-203ENST00000588094 ZNF831Q5JPB2 1677 aa12.73□□□□□ -0.37
ZNF404-203ENST00000588094 TAF1LQ8IZX4 1826 aa12.72□□□□□ -0.37
ZNF404-203ENST00000588094 ZNF521Q96K83 1311 aa12.72□□□□□ -0.37
ZNF404-203ENST00000588094 CALD1Q05682 793 aaKnown RBP12.71□□□□□ -0.37
ZNF404-203ENST00000588094 TAF7Q15545 349 aaPredicted RBP12.71□□□□□ -0.37
ZNF404-203ENST00000588094 WDR63Q8IWG1 891 aa12.71□□□□□ -0.37
ZNF404-203ENST00000588094 SALL2Q9Y467 1007 aaPredicted RBP12.71□□□□□ -0.37
ZNF404-203ENST00000588094 HNRNPUQ00839 825 aaKnown RBP eCLIP12.7□□□□□ -0.38
ZNF404-203ENST00000588094 CCDC125Q86Z20 511 aa12.7□□□□□ -0.38
ZNF404-203ENST00000588094 BABAM1Q9NWV8 329 aa12.7□□□□□ -0.38
ZNF404-203ENST00000588094 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
ZNF404-203ENST00000588094 CICQ96RK0 1608 aaPredicted RBP12.7□□□□□ -0.38
ZNF404-203ENST00000588094 IL16Q14005 1332 aa12.69□□□□□ -0.38
ZNF404-203ENST00000588094 BTBD11A6QL63 1104 aa12.69□□□□□ -0.38
ZNF404-203ENST00000588094 ZNF853P0CG23 659 aa12.69□□□□□ -0.38
ZNF404-203ENST00000588094 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
ZNF404-203ENST00000588094 ATG3Q9NT62 314 aa12.69□□□□□ -0.38
ZNF404-203ENST00000588094 ASAP1Q9ULH1 1129 aa12.69□□□□□ -0.38
ZNF404-203ENST00000588094 KCPQ6ZWJ8 1503 aa12.68□□□□□ -0.38
ZNF404-203ENST00000588094 RREB1Q92766 1687 aa12.68□□□□□ -0.38
ZNF404-203ENST00000588094 CHL1O00533 1208 aa12.68□□□□□ -0.38
ZNF404-203ENST00000588094 SMARCC1Q92922 1105 aaPredicted RBP12.68□□□□□ -0.38
ZNF404-203ENST00000588094 IFT57Q9NWB7 429 aa12.68□□□□□ -0.38
ZNF404-203ENST00000588094 CACNA1FO60840 1977 aa12.68□□□□□ -0.38
ZNF404-203ENST00000588094 ZBED9Q6R2W3 1325 aa12.67□□□□□ -0.38
ZNF404-203ENST00000588094 PLSCR1O15162 318 aa12.67□□□□□ -0.38
ZNF404-203ENST00000588094 APBA3O96018 575 aa12.67□□□□□ -0.38
ZNF404-203ENST00000588094 GNAI1P63096 354 aa12.67□□□□□ -0.38
ZNF404-203ENST00000588094 ZNF790Q6PG37 636 aa12.67□□□□□ -0.38
ZNF404-203ENST00000588094 UPF1Q92900 1129 aaKnown RBP eCLIP12.67□□□□□ -0.38
ZNF404-203ENST00000588094 COL5A3P25940 1745 aaPredicted RBP12.67□□□□□ -0.38
ZNF404-203ENST00000588094 TJP1Q07157 1748 aa12.67□□□□□ -0.38
ZNF404-203ENST00000588094 PALLDQ8WX93 1383 aa12.67□□□□□ -0.38
ZNF404-203ENST00000588094 C5P01031 1676 aa12.67□□□□□ -0.38
ZNF404-203ENST00000588094 LAMB4A4D0S4 1761 aa12.66□□□□□ -0.38
ZNF404-203ENST00000588094 ABCB7O75027 752 aa12.66□□□□□ -0.38
ZNF404-203ENST00000588094 SLC39A6Q13433 755 aa12.66□□□□□ -0.38
ZNF404-203ENST00000588094 SF3B2Q13435 895 aaKnown RBP12.66□□□□□ -0.38
ZNF404-203ENST00000588094 MIS18AQ9NYP9 233 aa12.66□□□□□ -0.38
ZNF404-203ENST00000588094 MYH14Q7Z406 1995 aaKnown RBP12.66□□□□□ -0.38
ZNF404-203ENST00000588094 KCNQ3O43525 872 aa12.65□□□□□ -0.38
ZNF404-203ENST00000588094 GOLGA2Q08379 1002 aa12.65□□□□□ -0.38
ZNF404-203ENST00000588094 TTC5Q8N0Z6 440 aa12.65□□□□□ -0.38
ZNF404-203ENST00000588094 MBIPQ9NS73 344 aa12.65□□□□□ -0.38
ZNF404-203ENST00000588094 TSPYL4Q9UJ04 414 aa12.65□□□□□ -0.38
ZNF404-203ENST00000588094 NUP188Q5SRE5 1749 aa12.65□□□□□ -0.38
ZNF404-203ENST00000588094 BAG6P46379 1132 aa12.64□□□□□ -0.39
ZNF404-203ENST00000588094 LAS1LQ9Y4W2 734 aaKnown RBP12.64□□□□□ -0.39
ZNF404-203ENST00000588094 HEG1Q9ULI3 1381 aa12.64□□□□□ -0.39
ZNF404-203ENST00000588094 LOC102724428A0A0B4J2F2 783 aa12.63□□□□□ -0.39
ZNF404-203ENST00000588094 E9PSI1 815 aa12.63□□□□□ -0.39
ZNF404-203ENST00000588094 SIK1P57059 783 aa12.63□□□□□ -0.39
ZNF404-203ENST00000588094 EIF4A1P60842 406 aaKnown RBP12.63□□□□□ -0.39
ZNF404-203ENST00000588094 VSIG10Q8N0Z9 540 aa12.63□□□□□ -0.39
ZNF404-203ENST00000588094 PROM2Q8N271 834 aa12.63□□□□□ -0.39
ZNF404-203ENST00000588094 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
ZNF404-203ENST00000588094 FMNL2Q96PY5 1086 aa12.63□□□□□ -0.39
ZNF404-203ENST00000588094 CAMKK2Q96RR4 588 aa12.63□□□□□ -0.39
ZNF404-203ENST00000588094 MYH16Q9H6N6 1097 aa12.63□□□□□ -0.39
ZNF404-203ENST00000588094 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
ZNF404-203ENST00000588094 SLFN5Q08AF3 891 aa12.62□□□□□ -0.39
ZNF404-203ENST00000588094 SLC27A3Q5K4L6 730 aa12.62□□□□□ -0.39
ZNF404-203ENST00000588094 TRMT2AQ8IZ69 625 aaKnown RBP12.62□□□□□ -0.39
ZNF404-203ENST00000588094 SLC4A9Q96Q91 983 aa12.62□□□□□ -0.39
ZNF404-203ENST00000588094 FANCIQ9NVI1 1328 aa12.62□□□□□ -0.39
ZNF404-203ENST00000588094 TUBGCP6Q96RT7 1819 aa12.61□□□□□ -0.39
ZNF404-203ENST00000588094 EN1Q05925 392 aaPredicted RBP12.61□□□□□ -0.39
ZNF404-203ENST00000588094 TXNRD1Q16881 649 aa12.61□□□□□ -0.39
ZNF404-203ENST00000588094 DEFB132Q7Z7B7 95 aa12.61□□□□□ -0.39
ZNF404-203ENST00000588094 TSR2Q969E8 191 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms