RNA–Protein interactions for RNA: ENST00000587905.5

LDLRAD4-212, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 5

Gene LDLRAD4, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-212ENST00000587905 RBM42Q9BTD8 480 aaKnown RBP27.14■■□□□ 1.94
LDLRAD4-212ENST00000587905 SLC52A2Q9HAB3 445 aa27.14■■□□□ 1.94
LDLRAD4-212ENST00000587905 PDGFDQ9GZP0 370 aaPredicted RBP27.13■■□□□ 1.93
LDLRAD4-212ENST00000587905 ADAMTS7Q9UKP4 1686 aa27.13■■□□□ 1.93
LDLRAD4-212ENST00000587905 AKT1S1Q96B36 256 aa27.12■■□□□ 1.93
LDLRAD4-212ENST00000587905 ATP6V1AP38606 617 aa27.11■■□□□ 1.93
LDLRAD4-212ENST00000587905 TFCP2L1Q9NZI6 479 aa27.11■■□□□ 1.93
LDLRAD4-212ENST00000587905 CASZ1Q86V15 1759 aa27.11■■□□□ 1.93
LDLRAD4-212ENST00000587905 MRC1P22897 1456 aa27.11■■□□□ 1.93
LDLRAD4-212ENST00000587905 TUBGCP6Q96RT7 1819 aa27.11■■□□□ 1.93
LDLRAD4-212ENST00000587905 WDR43Q15061 677 aaKnown RBP eCLIP27.1■■□□□ 1.93
LDLRAD4-212ENST00000587905 MAPK8IP3Q9UPT6 1336 aa27.1■■□□□ 1.93
LDLRAD4-212ENST00000587905 PTCD1O75127 700 aaKnown RBP27.09■■□□□ 1.93
LDLRAD4-212ENST00000587905 IL17REQ8NFR9 667 aa27.09■■□□□ 1.93
LDLRAD4-212ENST00000587905 PNNQ9H307 717 aaKnown RBP27.09■■□□□ 1.93
LDLRAD4-212ENST00000587905 C4BP0C0L5 1744 aa27.08■■□□□ 1.93
LDLRAD4-212ENST00000587905 ANP32CO43423 234 aa27.08■■□□□ 1.93
LDLRAD4-212ENST00000587905 TEFQ10587 303 aa27.08■■□□□ 1.93
LDLRAD4-212ENST00000587905 RTF1Q92541 710 aaKnown RBP27.08■■□□□ 1.93
LDLRAD4-212ENST00000587905 PLEKHF1Q96S99 279 aa27.07■■□□□ 1.92
LDLRAD4-212ENST00000587905 LRP5O75197 1615 aa27.07■■□□□ 1.92
LDLRAD4-212ENST00000587905 ZBTB7AO95365 584 aa27.06■■□□□ 1.92
LDLRAD4-212ENST00000587905 SLC39A6Q13433 755 aa27.06■■□□□ 1.92
LDLRAD4-212ENST00000587905 ITPK1Q13572 414 aa27.06■■□□□ 1.92
LDLRAD4-212ENST00000587905 LINC00116Q8NCU8 138 aa27.06■■□□□ 1.92
LDLRAD4-212ENST00000587905 DLG5Q8TDM6 1919 aa27.06■■□□□ 1.92
LDLRAD4-212ENST00000587905 QSER1Q2KHR3 1735 aa27.05■■□□□ 1.92
LDLRAD4-212ENST00000587905 MCM10Q7L590 875 aa27.05■■□□□ 1.92
LDLRAD4-212ENST00000587905 AK7Q96M32 723 aa27.05■■□□□ 1.92
LDLRAD4-212ENST00000587905 HMGB2P26583 209 aaKnown RBP27.04■■□□□ 1.92
LDLRAD4-212ENST00000587905 DCTN1Q14203 1278 aa27.04■■□□□ 1.92
LDLRAD4-212ENST00000587905 CCDC146Q8IYE0 955 aa27.04■■□□□ 1.92
LDLRAD4-212ENST00000587905 SLC4A9Q96Q91 983 aa27.04■■□□□ 1.92
LDLRAD4-212ENST00000587905 PNPLA7Q6ZV29 1317 aa27.04■■□□□ 1.92
LDLRAD4-212ENST00000587905 MSH5O43196 834 aa27.03■■□□□ 1.92
LDLRAD4-212ENST00000587905 SIPA1L3O60292 1781 aaPredicted RBP27.03■■□□□ 1.92
LDLRAD4-212ENST00000587905 SPON1Q9HCB6 807 aa27.02■■□□□ 1.92
LDLRAD4-212ENST00000587905 CEMIPQ8WUJ3 1361 aa27.01■■□□□ 1.91
LDLRAD4-212ENST00000587905 NFE2L2Q16236 605 aa27.01■■□□□ 1.91
LDLRAD4-212ENST00000587905 ATF5Q9Y2D1 282 aaPredicted RBP27.01■■□□□ 1.91
LDLRAD4-212ENST00000587905 ADAMTS8Q9UP79 889 aa27■■□□□ 1.91
LDLRAD4-212ENST00000587905 ZNF831Q5JPB2 1677 aa27■■□□□ 1.91
LDLRAD4-212ENST00000587905 COL5A3P25940 1745 aaPredicted RBP26.99■■□□□ 1.91
LDLRAD4-212ENST00000587905 SRCAPQ6ZRS2 3230 aa26.99■■□□□ 1.91
LDLRAD4-212ENST00000587905 PHF14O94880 888 aa26.99■■□□□ 1.91
LDLRAD4-212ENST00000587905 CCDC184Q52MB2 194 aa26.99■■□□□ 1.91
LDLRAD4-212ENST00000587905 TTC5Q8N0Z6 440 aa26.99■■□□□ 1.91
LDLRAD4-212ENST00000587905 UBR3Q6ZT12 1888 aa26.98■■□□□ 1.91
LDLRAD4-212ENST00000587905 SMIM5Q71RC9 77 aa26.98■■□□□ 1.91
LDLRAD4-212ENST00000587905 TJP1Q07157 1748 aa26.98■■□□□ 1.91
LDLRAD4-212ENST00000587905 KCPQ6ZWJ8 1503 aa26.97■■□□□ 1.91
LDLRAD4-212ENST00000587905 GNPATO15228 680 aa26.97■■□□□ 1.91
LDLRAD4-212ENST00000587905 HTATSF1O43719 755 aaKnown RBP26.97■■□□□ 1.91
LDLRAD4-212ENST00000587905 MTFR1LQ9H019 292 aa26.97■■□□□ 1.91
LDLRAD4-212ENST00000587905 UBR2Q8IWV8 1755 aa26.97■■□□□ 1.91
LDLRAD4-212ENST00000587905 BTBD11A6QL63 1104 aa26.96■■□□□ 1.91
LDLRAD4-212ENST00000587905 COL23A1Q86Y22 540 aaPredicted RBP26.96■■□□□ 1.91
LDLRAD4-212ENST00000587905 AMIGO3Q86WK7 504 aa26.95■■□□□ 1.9
LDLRAD4-212ENST00000587905 RRP7AQ9Y3A4 280 aaKnown RBP26.95■■□□□ 1.9
LDLRAD4-212ENST00000587905 ZNF790Q6PG37 636 aa26.94■■□□□ 1.9
LDLRAD4-212ENST00000587905 RUNDC1Q96C34 613 aa26.94■■□□□ 1.9
LDLRAD4-212ENST00000587905 THUMPD2Q9BTF0 503 aaKnown RBP26.94■■□□□ 1.9
LDLRAD4-212ENST00000587905 PPP1R1BQ9UD71 204 aaPredicted RBP26.94■■□□□ 1.9
LDLRAD4-212ENST00000587905 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.93■■□□□ 1.9
LDLRAD4-212ENST00000587905 RIPK4P57078 832 aa26.93■■□□□ 1.9
LDLRAD4-212ENST00000587905 NEUROD2Q15784 382 aa26.93■■□□□ 1.9
LDLRAD4-212ENST00000587905 DNAJC10Q8IXB1 793 aa26.93■■□□□ 1.9
LDLRAD4-212ENST00000587905 MRS2Q9HD23 443 aa26.93■■□□□ 1.9
LDLRAD4-212ENST00000587905 TMPOP42166 694 aaKnown RBP26.92■■□□□ 1.9
LDLRAD4-212ENST00000587905 FLAD1Q8NFF5 587 aa26.92■■□□□ 1.9
LDLRAD4-212ENST00000587905 CNTNAP4Q9C0A0 1308 aa26.91■■□□□ 1.9
LDLRAD4-212ENST00000587905 CICQ96RK0 1608 aaPredicted RBP26.91■■□□□ 1.9
LDLRAD4-212ENST00000587905 KCNQ3O43525 872 aa26.91■■□□□ 1.9
LDLRAD4-212ENST00000587905 SLC16A10Q8TF71 515 aa26.91■■□□□ 1.9
LDLRAD4-212ENST00000587905 ZNF496Q96IT1 587 aaPredicted RBP26.91■■□□□ 1.9
LDLRAD4-212ENST00000587905 MYH14Q7Z406 1995 aaKnown RBP26.91■■□□□ 1.9
LDLRAD4-212ENST00000587905 SSFA2P28290 1259 aa26.9■■□□□ 1.9
LDLRAD4-212ENST00000587905 CRKLP46109 303 aaKnown RBP26.9■■□□□ 1.9
LDLRAD4-212ENST00000587905 RTCBQ9Y3I0 505 aaKnown RBP26.9■■□□□ 1.9
LDLRAD4-212ENST00000587905 PTGER2P43116 358 aa26.89■■□□□ 1.9
LDLRAD4-212ENST00000587905 MSL1Q68DK7 614 aa26.89■■□□□ 1.9
LDLRAD4-212ENST00000587905 TAF7Q15545 349 aaPredicted RBP26.88■■□□□ 1.89
LDLRAD4-212ENST00000587905 RC3H1Q5TC82 1133 aaKnown RBP26.88■■□□□ 1.89
LDLRAD4-212ENST00000587905 MIS18AQ9NYP9 233 aa26.88■■□□□ 1.89
LDLRAD4-212ENST00000587905 HEG1Q9ULI3 1381 aa26.87■■□□□ 1.89
LDLRAD4-212ENST00000587905 FMNL2Q96PY5 1086 aa26.87■■□□□ 1.89
LDLRAD4-212ENST00000587905 LMOD3Q0VAK6 560 aa26.86■■□□□ 1.89
LDLRAD4-212ENST00000587905 VSIG10Q8N0Z9 540 aa26.86■■□□□ 1.89
LDLRAD4-212ENST00000587905 RPS6KA4O75676 772 aa26.85■■□□□ 1.89
LDLRAD4-212ENST00000587905 TRAPPC3LQ5T215 181 aa26.85■■□□□ 1.89
LDLRAD4-212ENST00000587905 CCDC87Q9NVE4 849 aa26.85■■□□□ 1.89
LDLRAD4-212ENST00000587905 CYP19A1P11511 503 aaPredicted RBP26.84■■□□□ 1.89
LDLRAD4-212ENST00000587905 POLD1P28340 1107 aa26.84■■□□□ 1.89
LDLRAD4-212ENST00000587905 INTS5Q6P9B9 1019 aaKnown RBP26.83■■□□□ 1.89
LDLRAD4-212ENST00000587905 SGIP1Q9BQI5 828 aa26.83■■□□□ 1.89
LDLRAD4-212ENST00000587905 KDM3BQ7LBC6 1761 aa26.81■■□□□ 1.88
LDLRAD4-212ENST00000587905 APAF1O14727 1248 aa26.81■■□□□ 1.88
LDLRAD4-212ENST00000587905 STARD3NLO95772 234 aa26.81■■□□□ 1.88
LDLRAD4-212ENST00000587905 PNISRQ8TF01 805 aaKnown RBP26.81■■□□□ 1.88
LDLRAD4-212ENST00000587905 ARHGEF1Q92888 912 aaKnown RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms