RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 HRH3Q9Y5N1 445 aa9.39□□□□□ -0.91
CACNA1A-208ENST00000587451 ATP9BO43861 1147 aa9.38□□□□□ -0.91
CACNA1A-208ENST00000587451 ATP1A2P50993 1020 aa9.38□□□□□ -0.91
CACNA1A-208ENST00000587451 GTF2IP78347 998 aa9.38□□□□□ -0.91
CACNA1A-208ENST00000587451 PLEKHM2Q8IWE5 1019 aa9.38□□□□□ -0.91
CACNA1A-208ENST00000587451 ADAMTS19Q8TE59 1207 aa9.38□□□□□ -0.91
CACNA1A-208ENST00000587451 RHBDD1Q8TEB9 315 aa9.38□□□□□ -0.91
CACNA1A-208ENST00000587451 A0A1B0GTH6 734 aa9.37□□□□□ -0.91
CACNA1A-208ENST00000587451 BACH1O14867 736 aa9.37□□□□□ -0.91
CACNA1A-208ENST00000587451 SCNN1DP51172 638 aa9.37□□□□□ -0.91
CACNA1A-208ENST00000587451 TRIM22Q8IYM9 498 aa9.37□□□□□ -0.91
CACNA1A-208ENST00000587451 ZSCAN1Q8NBB4 408 aa9.37□□□□□ -0.91
CACNA1A-208ENST00000587451 CALR3Q96L12 384 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-208ENST00000587451 FHDC1Q9C0D6 1143 aaPredicted RBP9.37□□□□□ -0.91
CACNA1A-208ENST00000587451 USP17L3A6NCW0 530 aa9.36□□□□□ -0.91
CACNA1A-208ENST00000587451 USP17L4A6NCW7 530 aa9.36□□□□□ -0.91
CACNA1A-208ENST00000587451 F11P03951 625 aa9.36□□□□□ -0.91
CACNA1A-208ENST00000587451 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
CACNA1A-208ENST00000587451 USP17L1Q7RTZ2 530 aa9.36□□□□□ -0.91
CACNA1A-208ENST00000587451 PPARGC1BQ86YN6 1023 aaKnown RBP9.36□□□□□ -0.91
CACNA1A-208ENST00000587451 DEPDC4Q8N2C3 294 aa9.36□□□□□ -0.91
CACNA1A-208ENST00000587451 SMTNP53814 917 aa9.35□□□□□ -0.91
CACNA1A-208ENST00000587451 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
CACNA1A-208ENST00000587451 UCN2Q96RP3 112 aa9.35□□□□□ -0.91
CACNA1A-208ENST00000587451 COL25A1Q9BXS0 654 aaPredicted RBP9.35□□□□□ -0.91
CACNA1A-208ENST00000587451 RBM19Q9Y4C8 960 aaKnown RBP9.35□□□□□ -0.91
CACNA1A-208ENST00000587451 PCDHGA11Q9Y5H2 935 aa9.35□□□□□ -0.91
CACNA1A-208ENST00000587451 STAU1O95793 577 aaKnown RBP9.34□□□□□ -0.91
CACNA1A-208ENST00000587451 CSB-PGBD3P0DP91 1061 aa9.34□□□□□ -0.91
CACNA1A-208ENST00000587451 PHKA2P46019 1235 aa9.34□□□□□ -0.91
CACNA1A-208ENST00000587451 PGBD3Q8N328 593 aa9.34□□□□□ -0.91
CACNA1A-208ENST00000587451 ZNF837Q96EG3 531 aaPredicted RBP9.34□□□□□ -0.91
CACNA1A-208ENST00000587451 TRERF1Q96PN7 1200 aa9.34□□□□□ -0.91
CACNA1A-208ENST00000587451 NIFKQ9BYG3 293 aaKnown RBP9.34□□□□□ -0.91
CACNA1A-208ENST00000587451 SERTAD1Q9UHV2 236 aa9.34□□□□□ -0.91
CACNA1A-208ENST00000587451 C4orf17Q53FE4 359 aa9.33□□□□□ -0.92
CACNA1A-208ENST00000587451 GPR161Q8N6U8 529 aaKnown RBP9.33□□□□□ -0.92
CACNA1A-208ENST00000587451 CNTNAP3BQ96NU0 1288 aa9.33□□□□□ -0.92
CACNA1A-208ENST00000587451 CNTNAP3Q9BZ76 1288 aa9.33□□□□□ -0.92
CACNA1A-208ENST00000587451 TMEM229AB2RXF0 380 aa9.32□□□□□ -0.92
CACNA1A-208ENST00000587451 SLC4A9Q96Q91 983 aa9.32□□□□□ -0.92
CACNA1A-208ENST00000587451 NUCKS1Q9H1E3 243 aaKnown RBP9.32□□□□□ -0.92
CACNA1A-208ENST00000587451 A6NJY4 79 aa9.31□□□□□ -0.92
CACNA1A-208ENST00000587451 PLA2G4AP47712 749 aa9.31□□□□□ -0.92
CACNA1A-208ENST00000587451 LBRQ14739 615 aaKnown RBP9.31□□□□□ -0.92
CACNA1A-208ENST00000587451 NBPF1Q3BBV0 1214 aa9.31□□□□□ -0.92
CACNA1A-208ENST00000587451 CUEDC1Q9NWM3 386 aaPredicted RBP9.31□□□□□ -0.92
CACNA1A-208ENST00000587451 MKRN1Q9UHC7 482 aaKnown RBP9.31□□□□□ -0.92
CACNA1A-208ENST00000587451 CDK2AP1O14519 115 aa9.3□□□□□ -0.92
CACNA1A-208ENST00000587451 DBN1Q16643 649 aa9.3□□□□□ -0.92
CACNA1A-208ENST00000587451 EFHC2Q5JST6 749 aa9.3□□□□□ -0.92
CACNA1A-208ENST00000587451 TPCN2Q8NHX9 752 aa9.3□□□□□ -0.92
CACNA1A-208ENST00000587451 C1orf216Q8TAB5 229 aa9.3□□□□□ -0.92
CACNA1A-208ENST00000587451 GPAMQ9HCL2 828 aa9.3□□□□□ -0.92
CACNA1A-208ENST00000587451 DNAAF2Q9NVR5 837 aaKnown RBP9.3□□□□□ -0.92
CACNA1A-208ENST00000587451 PALM3A6NDB9 673 aaPredicted RBP9.29□□□□□ -0.92
CACNA1A-208ENST00000587451 MTFR1Q15390 333 aa9.29□□□□□ -0.92
CACNA1A-208ENST00000587451 LARGE2Q8N3Y3 721 aa9.29□□□□□ -0.92
CACNA1A-208ENST00000587451 OGFOD1Q8N543 542 aa9.29□□□□□ -0.92
CACNA1A-208ENST00000587451 GTPBP3Q969Y2 492 aaKnown RBP9.29□□□□□ -0.92
CACNA1A-208ENST00000587451 ZNF358Q9NW07 568 aa9.29□□□□□ -0.92
CACNA1A-208ENST00000587451 TFIP11Q9UBB9 837 aaKnown RBP9.29□□□□□ -0.92
CACNA1A-208ENST00000587451 PHF24Q9UPV7 400 aa9.29□□□□□ -0.92
CACNA1A-208ENST00000587451 MAFBQ9Y5Q3 323 aaPredicted RBP9.29□□□□□ -0.92
CACNA1A-208ENST00000587451 CCDC102BQ68D86 513 aa9.28□□□□□ -0.92
CACNA1A-208ENST00000587451 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.28□□□□□ -0.92
CACNA1A-208ENST00000587451 AIDAQ96BJ3 306 aa9.28□□□□□ -0.92
CACNA1A-208ENST00000587451 PPP1R12CQ9BZL4 782 aa9.28□□□□□ -0.92
CACNA1A-208ENST00000587451 CABP1Q9NZU7 370 aa9.28□□□□□ -0.92
CACNA1A-208ENST00000587451 NSFL1CQ9UNZ2 370 aaKnown RBP9.28□□□□□ -0.92
CACNA1A-208ENST00000587451 TATP17735 454 aaPredicted RBP9.27□□□□□ -0.93
CACNA1A-208ENST00000587451 MSX1P28360 303 aa9.27□□□□□ -0.93
CACNA1A-208ENST00000587451 KRT76Q01546 638 aa9.27□□□□□ -0.93
CACNA1A-208ENST00000587451 RNFT1Q5M7Z0 435 aa9.27□□□□□ -0.93
CACNA1A-208ENST00000587451 RASA1P20936 1047 aa9.26□□□□□ -0.93
CACNA1A-208ENST00000587451 SRSF11Q05519 484 aaKnown RBP9.26□□□□□ -0.93
CACNA1A-208ENST00000587451 LARP1Q6PKG0 1096 aaKnown RBP9.26□□□□□ -0.93
CACNA1A-208ENST00000587451 MBIPQ9NS73 344 aa9.26□□□□□ -0.93
CACNA1A-208ENST00000587451 SCHIP1Q9P0W5 487 aaPredicted RBP9.26□□□□□ -0.93
CACNA1A-208ENST00000587451 CHMP3Q9Y3E7 222 aa9.26□□□□□ -0.93
CACNA1A-208ENST00000587451 GPR25O00155 361 aa9.25□□□□□ -0.93
CACNA1A-208ENST00000587451 CLDN10P78369 228 aa9.25□□□□□ -0.93
CACNA1A-208ENST00000587451 SIX5Q8N196 739 aa9.25□□□□□ -0.93
CACNA1A-208ENST00000587451 ZNF594Q96JF6 807 aaPredicted RBP9.25□□□□□ -0.93
CACNA1A-208ENST00000587451 RUBCNLQ9H714 662 aa9.25□□□□□ -0.93
CACNA1A-208ENST00000587451 ZNF777Q9ULD5 760 aaPredicted RBP9.25□□□□□ -0.93
CACNA1A-208ENST00000587451 IQSEC3Q9UPP2 1182 aaPredicted RBP9.25□□□□□ -0.93
CACNA1A-208ENST00000587451 M0R2N6 131 aa9.24□□□□□ -0.93
CACNA1A-208ENST00000587451 FIGNL1Q6PIW4 674 aa9.24□□□□□ -0.93
CACNA1A-208ENST00000587451 CFHR5Q9BXR6 569 aa9.24□□□□□ -0.93
CACNA1A-208ENST00000587451 CRISPLD1Q9H336 500 aa9.24□□□□□ -0.93
CACNA1A-208ENST00000587451 ZDHHC3Q9NYG2 299 aa9.24□□□□□ -0.93
CACNA1A-208ENST00000587451 GTF3C3Q9Y5Q9 886 aa9.24□□□□□ -0.93
CACNA1A-208ENST00000587451 ZBTB7BO15156 539 aaPredicted RBP9.23□□□□□ -0.93
CACNA1A-208ENST00000587451 ADAMTS2O95450 1211 aa9.23□□□□□ -0.93
CACNA1A-208ENST00000587451 SLURP2P0DP57 97 aa9.23□□□□□ -0.93
CACNA1A-208ENST00000587451 MX2P20592 715 aa9.23□□□□□ -0.93
CACNA1A-208ENST00000587451 LORP23490 312 aaPredicted RBP9.23□□□□□ -0.93
CACNA1A-208ENST00000587451 LMOD1P29536 600 aaPredicted RBP9.23□□□□□ -0.93
CACNA1A-208ENST00000587451 ARSJQ5FYB0 599 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms