RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 NHSQ6T4R5 1651 aa19.46■□□□□ 0.7
NFIX-208ENST00000587260 KDM3BQ7LBC6 1761 aa19.45■□□□□ 0.7
NFIX-208ENST00000587260 TEFQ10587 303 aa19.45■□□□□ 0.7
NFIX-208ENST00000587260 DUSP27Q5VZP5 1158 aa19.45■□□□□ 0.7
NFIX-208ENST00000587260 ACSBG1Q96GR2 724 aa19.44■□□□□ 0.7
NFIX-208ENST00000587260 PAPPAQ13219 1627 aa19.43■□□□□ 0.7
NFIX-208ENST00000587260 SYTL4Q96C24 671 aaPredicted RBP19.42■□□□□ 0.7
NFIX-208ENST00000587260 SLC52A2Q9HAB3 445 aa19.42■□□□□ 0.7
NFIX-208ENST00000587260 CABP4P57796 275 aa19.41■□□□□ 0.7
NFIX-208ENST00000587260 ZNF853P0CG23 659 aa19.41■□□□□ 0.7
NFIX-208ENST00000587260 NFATC2IPQ8NCF5 419 aa19.41■□□□□ 0.7
NFIX-208ENST00000587260 MYH16Q9H6N6 1097 aa19.41■□□□□ 0.7
NFIX-208ENST00000587260 MIS18AQ9NYP9 233 aa19.41■□□□□ 0.7
NFIX-208ENST00000587260 BTAF1O14981 1849 aa19.4■□□□□ 0.7
NFIX-208ENST00000587260 ERVV-2B6SEH9 535 aa19.4■□□□□ 0.7
NFIX-208ENST00000587260 TSR2Q969E8 191 aaKnown RBP19.4■□□□□ 0.7
NFIX-208ENST00000587260 IFT57Q9NWB7 429 aa19.4■□□□□ 0.7
NFIX-208ENST00000587260 TMOD3Q9NYL9 352 aa19.4■□□□□ 0.7
NFIX-208ENST00000587260 EP400Q96L91 3159 aa19.4■□□□□ 0.7
NFIX-208ENST00000587260 PRIM1P49642 420 aaKnown RBP19.39■□□□□ 0.69
NFIX-208ENST00000587260 CFAP44Q96MT7 982 aa19.39■□□□□ 0.69
NFIX-208ENST00000587260 BCL9O00512 1426 aa19.38■□□□□ 0.69
NFIX-208ENST00000587260 FANCIQ9NVI1 1328 aa19.38■□□□□ 0.69
NFIX-208ENST00000587260 GNAI1P63096 354 aa19.38■□□□□ 0.69
NFIX-208ENST00000587260 TSPYL4Q9UJ04 414 aa19.38■□□□□ 0.69
NFIX-208ENST00000587260 UBR2Q8IWV8 1755 aa19.38■□□□□ 0.69
NFIX-208ENST00000587260 BTBD11A6QL63 1104 aa19.37■□□□□ 0.69
NFIX-208ENST00000587260 KCNQ2O43526 872 aa19.37■□□□□ 0.69
NFIX-208ENST00000587260 TAF7Q15545 349 aaPredicted RBP19.37■□□□□ 0.69
NFIX-208ENST00000587260 MBIPQ9NS73 344 aa19.37■□□□□ 0.69
NFIX-208ENST00000587260 CHL1O00533 1208 aa19.35■□□□□ 0.69
NFIX-208ENST00000587260 SLC39A6Q13433 755 aa19.35■□□□□ 0.69
NFIX-208ENST00000587260 FAM196AQ6ZSG2 479 aa19.35■□□□□ 0.69
NFIX-208ENST00000587260 PIGBQ92521 554 aa19.35■□□□□ 0.69
NFIX-208ENST00000587260 BABAM1Q9NWV8 329 aa19.35■□□□□ 0.69
NFIX-208ENST00000587260 TNS1Q9HBL0 1735 aaKnown RBP19.35■□□□□ 0.69
NFIX-208ENST00000587260 PTF1AQ7RTS3 328 aa19.35■□□□□ 0.69
NFIX-208ENST00000587260 C5P01031 1676 aa19.34■□□□□ 0.69
NFIX-208ENST00000587260 KCNQ3O43525 872 aa19.34■□□□□ 0.69
NFIX-208ENST00000587260 KCPQ6ZWJ8 1503 aa19.33■□□□□ 0.68
NFIX-208ENST00000587260 CT47B1P0C2W7 299 aaPredicted RBP19.32■□□□□ 0.68
NFIX-208ENST00000587260 ZNF790Q6PG37 636 aa19.31■□□□□ 0.68
NFIX-208ENST00000587260 TTC5Q8N0Z6 440 aa19.31■□□□□ 0.68
NFIX-208ENST00000587260 ASAP1Q9ULH1 1129 aa19.31■□□□□ 0.68
NFIX-208ENST00000587260 TRIM37O94972 964 aa19.3■□□□□ 0.68
NFIX-208ENST00000587260 KRT24Q2M2I5 525 aa19.3■□□□□ 0.68
NFIX-208ENST00000587260 LAMB4A4D0S4 1761 aa19.3■□□□□ 0.68
NFIX-208ENST00000587260 ATG3Q9NT62 314 aa19.3■□□□□ 0.68
NFIX-208ENST00000587260 EXOSC9Q06265 439 aaKnown RBP19.29■□□□□ 0.68
NFIX-208ENST00000587260 RCAN3Q9UKA8 241 aa19.29■□□□□ 0.68
NFIX-208ENST00000587260 LY75O60449 1722 aa19.29■□□□□ 0.68
NFIX-208ENST00000587260 PALLDQ8WX93 1383 aa19.28■□□□□ 0.68
NFIX-208ENST00000587260 TJP1Q07157 1748 aa19.28■□□□□ 0.68
NFIX-208ENST00000587260 PTCD1O75127 700 aaKnown RBP19.27■□□□□ 0.68
NFIX-208ENST00000587260 EIF4A1P60842 406 aaKnown RBP19.27■□□□□ 0.68
NFIX-208ENST00000587260 ZNF496Q96IT1 587 aaPredicted RBP19.27■□□□□ 0.68
NFIX-208ENST00000587260 BCL11BQ9C0K0 894 aaPredicted RBP19.27■□□□□ 0.68
NFIX-208ENST00000587260 ELL2O00472 640 aaPredicted RBP19.26■□□□□ 0.67
NFIX-208ENST00000587260 C8orf58Q8NAV2 365 aa19.26■□□□□ 0.67
NFIX-208ENST00000587260 RNF123Q5XPI4 1314 aa19.26■□□□□ 0.67
NFIX-208ENST00000587260 TSPYL6Q8N831 410 aa19.25■□□□□ 0.67
NFIX-208ENST00000587260 ZNF428Q96B54 188 aa19.25■□□□□ 0.67
NFIX-208ENST00000587260 RBM42Q9BTD8 480 aaKnown RBP19.25■□□□□ 0.67
NFIX-208ENST00000587260 FMNL2Q96PY5 1086 aa19.25■□□□□ 0.67
NFIX-208ENST00000587260 SUPT16HQ9Y5B9 1047 aaKnown RBP19.25■□□□□ 0.67
NFIX-208ENST00000587260 PRAMEF22A3QJZ6 481 aa19.24■□□□□ 0.67
NFIX-208ENST00000587260 HEG1Q9ULI3 1381 aa19.23■□□□□ 0.67
NFIX-208ENST00000587260 CICQ96RK0 1608 aaPredicted RBP19.23■□□□□ 0.67
NFIX-208ENST00000587260 TWISTNBQ3B726 338 aaPredicted RBP19.23■□□□□ 0.67
NFIX-208ENST00000587260 COL5A3P25940 1745 aaPredicted RBP19.22■□□□□ 0.67
NFIX-208ENST00000587260 SMARCC1Q92922 1105 aaPredicted RBP19.22■□□□□ 0.67
NFIX-208ENST00000587260 SOS1Q07889 1333 aaPredicted RBP19.22■□□□□ 0.67
NFIX-208ENST00000587260 ZNF831Q5JPB2 1677 aa19.22■□□□□ 0.67
NFIX-208ENST00000587260 RGPD3A6NKT7 1758 aaPredicted RBP19.22■□□□□ 0.67
NFIX-208ENST00000587260 RGPD4Q7Z3J3 1758 aa19.22■□□□□ 0.67
NFIX-208ENST00000587260 VAMP4O75379 141 aa19.21■□□□□ 0.67
NFIX-208ENST00000587260 TAF1LQ8IZX4 1826 aa19.21■□□□□ 0.66
NFIX-208ENST00000587260 GIGYF1O75420 1035 aaPredicted RBP19.2■□□□□ 0.66
NFIX-208ENST00000587260 RARSP54136 660 aaKnown RBP19.2■□□□□ 0.66
NFIX-208ENST00000587260 LOC102724428A0A0B4J2F2 783 aa19.2■□□□□ 0.66
NFIX-208ENST00000587260 APBA3O96018 575 aa19.2■□□□□ 0.66
NFIX-208ENST00000587260 SIK1P57059 783 aa19.2■□□□□ 0.66
NFIX-208ENST00000587260 NECTIN2Q92692 538 aa19.2■□□□□ 0.66
NFIX-208ENST00000587260 SLC4A9Q96Q91 983 aa19.2■□□□□ 0.66
NFIX-208ENST00000587260 SNRPA1P09661 255 aaKnown RBP19.19■□□□□ 0.66
NFIX-208ENST00000587260 ALDH1L2Q3SY69 923 aa19.19■□□□□ 0.66
NFIX-208ENST00000587260 TCERG1O14776 1098 aaKnown RBP19.18■□□□□ 0.66
NFIX-208ENST00000587260 EIF2S2P20042 333 aaKnown RBP19.18■□□□□ 0.66
NFIX-208ENST00000587260 ATP6V1AP38606 617 aa19.18■□□□□ 0.66
NFIX-208ENST00000587260 KCNQ4P56696 695 aa19.18■□□□□ 0.66
NFIX-208ENST00000587260 DNAJC10Q8IXB1 793 aa19.18■□□□□ 0.66
NFIX-208ENST00000587260 HDGFL1Q5TGJ6 251 aa19.17■□□□□ 0.66
NFIX-208ENST00000587260 HOXB7P09629 217 aa19.16■□□□□ 0.66
NFIX-208ENST00000587260 BRPF1P55201 1214 aaPredicted RBP19.16■□□□□ 0.66
NFIX-208ENST00000587260 VSIG10Q8N0Z9 540 aa19.16■□□□□ 0.66
NFIX-208ENST00000587260 BCL2L13Q9BXK5 485 aa19.16■□□□□ 0.66
NFIX-208ENST00000587260 CCNL1Q9UK58 526 aaPredicted RBP19.16■□□□□ 0.66
NFIX-208ENST00000587260 USP16Q9Y5T5 823 aa19.16■□□□□ 0.66
NFIX-208ENST00000587260 RRP1P56182 461 aaKnown RBP19.15■□□□□ 0.66
NFIX-208ENST00000587260 ITPK1Q13572 414 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms