RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 IL17REQ8NFR9 667 aa8.66□□□□□ -1.02
NPC1-206ENST00000587223 ASAP1Q9ULH1 1129 aa8.66□□□□□ -1.02
NPC1-206ENST00000587223 TNS1Q9HBL0 1735 aaKnown RBP8.66□□□□□ -1.02
NPC1-206ENST00000587223 NHSQ6T4R5 1651 aa8.65□□□□□ -1.02
NPC1-206ENST00000587223 MAP3K5Q99683 1374 aa8.65□□□□□ -1.02
NPC1-206ENST00000587223 HTATSF1O43719 755 aaKnown RBP8.65□□□□□ -1.02
NPC1-206ENST00000587223 HMGB2P26583 209 aaKnown RBP8.65□□□□□ -1.02
NPC1-206ENST00000587223 TEFQ10587 303 aa8.65□□□□□ -1.02
NPC1-206ENST00000587223 NFE2L2Q16236 605 aa8.65□□□□□ -1.02
NPC1-206ENST00000587223 SLC27A3Q5K4L6 730 aa8.65□□□□□ -1.02
NPC1-206ENST00000587223 PNISRQ8TF01 805 aaKnown RBP8.65□□□□□ -1.02
NPC1-206ENST00000587223 RUNDC1Q96C34 613 aa8.65□□□□□ -1.02
NPC1-206ENST00000587223 SLC52A2Q9HAB3 445 aa8.65□□□□□ -1.02
NPC1-206ENST00000587223 ATG3Q9NT62 314 aa8.65□□□□□ -1.02
NPC1-206ENST00000587223 CCNL1Q9UK58 526 aaPredicted RBP8.65□□□□□ -1.02
NPC1-206ENST00000587223 BTAF1O14981 1849 aa8.65□□□□□ -1.02
NPC1-206ENST00000587223 DOT1LQ8TEK3 1739 aa8.65□□□□□ -1.03
NPC1-206ENST00000587223 KDM6AO15550 1401 aaPredicted RBP8.64□□□□□ -1.03
NPC1-206ENST00000587223 KCNQ4P56696 695 aa8.64□□□□□ -1.03
NPC1-206ENST00000587223 RIPK4P57078 832 aa8.64□□□□□ -1.03
NPC1-206ENST00000587223 NEUROD2Q15784 382 aa8.64□□□□□ -1.03
NPC1-206ENST00000587223 MCM10Q7L590 875 aa8.64□□□□□ -1.03
NPC1-206ENST00000587223 RBM42Q9BTD8 480 aaKnown RBP8.64□□□□□ -1.03
NPC1-206ENST00000587223 EP400Q96L91 3159 aa8.64□□□□□ -1.03
NPC1-206ENST00000587223 ITGB4P16144 1822 aa8.64□□□□□ -1.03
NPC1-206ENST00000587223 PALLDQ8WX93 1383 aa8.63□□□□□ -1.03
NPC1-206ENST00000587223 LOC102724428A0A0B4J2F2 783 aa8.63□□□□□ -1.03
NPC1-206ENST00000587223 ATP6V1AP38606 617 aa8.63□□□□□ -1.03
NPC1-206ENST00000587223 TMPOP42166 694 aaKnown RBP8.63□□□□□ -1.03
NPC1-206ENST00000587223 SIK1P57059 783 aa8.63□□□□□ -1.03
NPC1-206ENST00000587223 DCTN1Q14203 1278 aa8.63□□□□□ -1.03
NPC1-206ENST00000587223 LRRC4BQ9NT99 713 aa8.63□□□□□ -1.03
NPC1-206ENST00000587223 STK32BQ9NY57 414 aa8.63□□□□□ -1.03
NPC1-206ENST00000587223 ZNF219Q9P2Y4 722 aaPredicted RBP8.63□□□□□ -1.03
NPC1-206ENST00000587223 RRP7AQ9Y3A4 280 aaKnown RBP8.63□□□□□ -1.03
NPC1-206ENST00000587223 PSDA5PKW4 1024 aaPredicted RBP8.62□□□□□ -1.03
NPC1-206ENST00000587223 PTCD1O75127 700 aaKnown RBP8.62□□□□□ -1.03
NPC1-206ENST00000587223 SLC39A6Q13433 755 aa8.62□□□□□ -1.03
NPC1-206ENST00000587223 R3HDM1Q15032 1099 aaKnown RBP8.62□□□□□ -1.03
NPC1-206ENST00000587223 FAM9BQ8IZU0 186 aa8.62□□□□□ -1.03
NPC1-206ENST00000587223 TTC5Q8N0Z6 440 aa8.62□□□□□ -1.03
NPC1-206ENST00000587223 TOGARAM1Q9Y4F4 1720 aa8.62□□□□□ -1.03
NPC1-206ENST00000587223 SCN11AQ9UI33 1791 aa8.61□□□□□ -1.03
NPC1-206ENST00000587223 BTBD11A6QL63 1104 aa8.61□□□□□ -1.03
NPC1-206ENST00000587223 APAF1O14727 1248 aa8.61□□□□□ -1.03
NPC1-206ENST00000587223 LMOD3Q0VAK6 560 aa8.61□□□□□ -1.03
NPC1-206ENST00000587223 TAF7Q15545 349 aaPredicted RBP8.61□□□□□ -1.03
NPC1-206ENST00000587223 SLC15A2Q16348 729 aa8.61□□□□□ -1.03
NPC1-206ENST00000587223 CCER2I3L3R5 266 aa8.6□□□□□ -1.03
NPC1-206ENST00000587223 THUMPD2Q9BTF0 503 aaKnown RBP8.6□□□□□ -1.03
NPC1-206ENST00000587223 ANO8Q9HCE9 1232 aaPredicted RBP8.6□□□□□ -1.03
NPC1-206ENST00000587223 TFCP2L1Q9NZI6 479 aa8.6□□□□□ -1.03
NPC1-206ENST00000587223 RGPD3A6NKT7 1758 aaPredicted RBP8.6□□□□□ -1.03
NPC1-206ENST00000587223 RGPD4Q7Z3J3 1758 aa8.6□□□□□ -1.03
NPC1-206ENST00000587223 CEMIPQ8WUJ3 1361 aa8.6□□□□□ -1.03
NPC1-206ENST00000587223 ITPK1Q13572 414 aa8.59□□□□□ -1.03
NPC1-206ENST00000587223 ZNF790Q6PG37 636 aa8.59□□□□□ -1.03
NPC1-206ENST00000587223 MIER1Q8N108 512 aa8.59□□□□□ -1.03
NPC1-206ENST00000587223 AKT1S1Q96B36 256 aa8.59□□□□□ -1.03
NPC1-206ENST00000587223 SLC4A9Q96Q91 983 aa8.59□□□□□ -1.03
NPC1-206ENST00000587223 MIS18AQ9NYP9 233 aa8.59□□□□□ -1.03
NPC1-206ENST00000587223 VIRMAQ69YN4 1812 aaKnown RBP8.59□□□□□ -1.03
NPC1-206ENST00000587223 LY75O60449 1722 aa8.58□□□□□ -1.04
NPC1-206ENST00000587223 KCNQ3O43525 872 aa8.58□□□□□ -1.04
NPC1-206ENST00000587223 ZNF827Q17R98 1081 aa8.58□□□□□ -1.04
NPC1-206ENST00000587223 LINC00116Q8NCU8 138 aa8.58□□□□□ -1.04
NPC1-206ENST00000587223 ZNF496Q96IT1 587 aaPredicted RBP8.58□□□□□ -1.04
NPC1-206ENST00000587223 AK7Q96M32 723 aa8.58□□□□□ -1.04
NPC1-206ENST00000587223 FMNL2Q96PY5 1086 aa8.58□□□□□ -1.04
NPC1-206ENST00000587223 TRIM35Q9UPQ4 493 aa8.58□□□□□ -1.04
NPC1-206ENST00000587223 RREB1Q92766 1687 aa8.58□□□□□ -1.04
NPC1-206ENST00000587223 DLG5Q8TDM6 1919 aa8.58□□□□□ -1.04
NPC1-206ENST00000587223 NUP188Q5SRE5 1749 aa8.57□□□□□ -1.04
NPC1-206ENST00000587223 SENP3-EIF4A1A0A087X0R7 540 aa8.57□□□□□ -1.04
NPC1-206ENST00000587223 RC3H1Q5TC82 1133 aaKnown RBP8.57□□□□□ -1.04
NPC1-206ENST00000587223 DNAJC10Q8IXB1 793 aa8.57□□□□□ -1.04
NPC1-206ENST00000587223 VSIG10Q8N0Z9 540 aa8.57□□□□□ -1.04
NPC1-206ENST00000587223 FLAD1Q8NFF5 587 aa8.57□□□□□ -1.04
NPC1-206ENST00000587223 TEX13AQ9BXU3 409 aaPredicted RBP8.57□□□□□ -1.04
NPC1-206ENST00000587223 SALL2Q9Y467 1007 aaPredicted RBP8.57□□□□□ -1.04
NPC1-206ENST00000587223 LAS1LQ9Y4W2 734 aaKnown RBP8.57□□□□□ -1.04
NPC1-206ENST00000587223 MRC1P22897 1456 aa8.57□□□□□ -1.04
NPC1-206ENST00000587223 ADAMTS7Q9UKP4 1686 aa8.56□□□□□ -1.04
NPC1-206ENST00000587223 GNPATO15228 680 aa8.56□□□□□ -1.04
NPC1-206ENST00000587223 STARD3NLO95772 234 aa8.56□□□□□ -1.04
NPC1-206ENST00000587223 SNRPA1P09661 255 aaKnown RBP8.56□□□□□ -1.04
NPC1-206ENST00000587223 CALD1Q05682 793 aaKnown RBP8.56□□□□□ -1.04
NPC1-206ENST00000587223 BABAM1Q9NWV8 329 aa8.56□□□□□ -1.04
NPC1-206ENST00000587223 TSPYL4Q9UJ04 414 aa8.56□□□□□ -1.04
NPC1-206ENST00000587223 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
NPC1-206ENST00000587223 RPS6KA4O75676 772 aa8.55□□□□□ -1.04
NPC1-206ENST00000587223 PHF14O94880 888 aa8.55□□□□□ -1.04
NPC1-206ENST00000587223 CYP19A1P11511 503 aaPredicted RBP8.55□□□□□ -1.04
NPC1-206ENST00000587223 CRKLP46109 303 aaKnown RBP8.55□□□□□ -1.04
NPC1-206ENST00000587223 TRAPPC3LQ5T215 181 aa8.55□□□□□ -1.04
NPC1-206ENST00000587223 COL23A1Q86Y22 540 aaPredicted RBP8.55□□□□□ -1.04
NPC1-206ENST00000587223 PDGFDQ9GZP0 370 aaPredicted RBP8.55□□□□□ -1.04
NPC1-206ENST00000587223 HEG1Q9ULI3 1381 aa8.55□□□□□ -1.04
NPC1-206ENST00000587223 PNPLA7Q6ZV29 1317 aa8.54□□□□□ -1.04
NPC1-206ENST00000587223 CNTNAP4Q9C0A0 1308 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms