RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 SIPA1L3O60292 1781 aaPredicted RBP19.11■□□□□ 0.65
CALR-204ENST00000586967 BTBD11A6QL63 1104 aa19.1■□□□□ 0.65
CALR-204ENST00000586967 KRT27Q7Z3Y8 459 aa19.1■□□□□ 0.65
CALR-204ENST00000586967 CDCA7LQ96GN5 454 aa19.1■□□□□ 0.65
CALR-204ENST00000586967 CT47B1P0C2W7 299 aaPredicted RBP19.09■□□□□ 0.65
CALR-204ENST00000586967 DUSP27Q5VZP5 1158 aa19.09■□□□□ 0.65
CALR-204ENST00000586967 CHMP4AQ9BY43 222 aa19.09■□□□□ 0.65
CALR-204ENST00000586967 DOT1LQ8TEK3 1739 aa19.08■□□□□ 0.65
CALR-204ENST00000586967 FANCIQ9NVI1 1328 aa19.08■□□□□ 0.65
CALR-204ENST00000586967 POTEAQ6S8J7 498 aa19.08■□□□□ 0.64
CALR-204ENST00000586967 NFATC2IPQ8NCF5 419 aa19.08■□□□□ 0.64
CALR-204ENST00000586967 MBIPQ9NS73 344 aa19.08■□□□□ 0.64
CALR-204ENST00000586967 SOS1Q07889 1333 aaPredicted RBP19.07■□□□□ 0.64
CALR-204ENST00000586967 FAM196AQ6ZSG2 479 aa19.07■□□□□ 0.64
CALR-204ENST00000586967 TTC5Q8N0Z6 440 aa19.07■□□□□ 0.64
CALR-204ENST00000586967 TOGARAM1Q9Y4F4 1720 aa19.07■□□□□ 0.64
CALR-204ENST00000586967 SPINK5Q9NQ38 1064 aaPredicted RBP19.06■□□□□ 0.64
CALR-204ENST00000586967 ITGB4P16144 1822 aa19.06■□□□□ 0.64
CALR-204ENST00000586967 BRWD3Q6RI45 1802 aa19.06■□□□□ 0.64
CALR-204ENST00000586967 KDM3BQ7LBC6 1761 aa19.06■□□□□ 0.64
CALR-204ENST00000586967 SYTL4Q96C24 671 aaPredicted RBP19.05■□□□□ 0.64
CALR-204ENST00000586967 RGS12O14924 1447 aa19.04■□□□□ 0.64
CALR-204ENST00000586967 ZNF790Q6PG37 636 aa19.04■□□□□ 0.64
CALR-204ENST00000586967 TSR2Q969E8 191 aaKnown RBP19.04■□□□□ 0.64
CALR-204ENST00000586967 ZNF428Q96B54 188 aa19.04■□□□□ 0.64
CALR-204ENST00000586967 PRIM1P49642 420 aaKnown RBP19.03■□□□□ 0.64
CALR-204ENST00000586967 KAT6BQ8WYB5 2073 aa19.02■□□□□ 0.64
CALR-204ENST00000586967 NHSQ6T4R5 1651 aa19.02■□□□□ 0.64
CALR-204ENST00000586967 SMARCC1Q92922 1105 aaPredicted RBP19.02■□□□□ 0.64
CALR-204ENST00000586967 PAPPAQ13219 1627 aa19.01■□□□□ 0.63
CALR-204ENST00000586967 HOXB7P09629 217 aa19.01■□□□□ 0.63
CALR-204ENST00000586967 EXOSC9Q06265 439 aaKnown RBP19.01■□□□□ 0.63
CALR-204ENST00000586967 PIGBQ92521 554 aa19.01■□□□□ 0.63
CALR-204ENST00000586967 FMNL2Q96PY5 1086 aa19.01■□□□□ 0.63
CALR-204ENST00000586967 MIS18AQ9NYP9 233 aa19.01■□□□□ 0.63
CALR-204ENST00000586967 ACSBG1Q96GR2 724 aa19■□□□□ 0.63
CALR-204ENST00000586967 HMGB2P26583 209 aaKnown RBP18.99■□□□□ 0.63
CALR-204ENST00000586967 EIF4A1P60842 406 aaKnown RBP18.99■□□□□ 0.63
CALR-204ENST00000586967 TWISTNBQ3B726 338 aaPredicted RBP18.99■□□□□ 0.63
CALR-204ENST00000586967 SBF2Q86WG5 1849 aa18.99■□□□□ 0.63
CALR-204ENST00000586967 BCL11BQ9C0K0 894 aaPredicted RBP18.98■□□□□ 0.63
CALR-204ENST00000586967 UBR2Q8IWV8 1755 aa18.98■□□□□ 0.63
CALR-204ENST00000586967 SLC39A6Q13433 755 aa18.97■□□□□ 0.63
CALR-204ENST00000586967 TEX13AQ9BXU3 409 aaPredicted RBP18.97■□□□□ 0.63
CALR-204ENST00000586967 SNRPA1P09661 255 aaKnown RBP18.96■□□□□ 0.63
CALR-204ENST00000586967 VSIG10Q8N0Z9 540 aa18.96■□□□□ 0.63
CALR-204ENST00000586967 RCAN3Q9UKA8 241 aa18.96■□□□□ 0.63
CALR-204ENST00000586967 ATG3Q9NT62 314 aa18.95■□□□□ 0.62
CALR-204ENST00000586967 HEG1Q9ULI3 1381 aa18.94■□□□□ 0.62
CALR-204ENST00000586967 ALDH1L2Q3SY69 923 aa18.94■□□□□ 0.62
CALR-204ENST00000586967 FAM182BQ5T319 152 aa18.94■□□□□ 0.62
CALR-204ENST00000586967 CCDC30Q5VVM6 783 aa18.94■□□□□ 0.62
CALR-204ENST00000586967 C8orf58Q8NAV2 365 aa18.94■□□□□ 0.62
CALR-204ENST00000586967 ZNF496Q96IT1 587 aaPredicted RBP18.94■□□□□ 0.62
CALR-204ENST00000586967 ASAP1Q9ULH1 1129 aa18.94■□□□□ 0.62
CALR-204ENST00000586967 BTAF1O14981 1849 aa18.93■□□□□ 0.62
CALR-204ENST00000586967 VAMP4O75379 141 aa18.93■□□□□ 0.62
CALR-204ENST00000586967 GIGYF1O75420 1035 aaPredicted RBP18.93■□□□□ 0.62
CALR-204ENST00000586967 KCPQ6ZWJ8 1503 aa18.93■□□□□ 0.62
CALR-204ENST00000586967 ELL2O00472 640 aaPredicted RBP18.92■□□□□ 0.62
CALR-204ENST00000586967 KCNQ3O43525 872 aa18.92■□□□□ 0.62
CALR-204ENST00000586967 KCNQ2O43526 872 aa18.92■□□□□ 0.62
CALR-204ENST00000586967 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.92■□□□□ 0.62
CALR-204ENST00000586967 RBM42Q9BTD8 480 aaKnown RBP18.92■□□□□ 0.62
CALR-204ENST00000586967 STK31Q9BXU1 1019 aa18.92■□□□□ 0.62
CALR-204ENST00000586967 PALLDQ8WX93 1383 aa18.92■□□□□ 0.62
CALR-204ENST00000586967 ZNF831Q5JPB2 1677 aa18.92■□□□□ 0.62
CALR-204ENST00000586967 LAMB4A4D0S4 1761 aa18.91■□□□□ 0.62
CALR-204ENST00000586967 PTCD1O75127 700 aaKnown RBP18.91■□□□□ 0.62
CALR-204ENST00000586967 HDGFL1Q5TGJ6 251 aa18.91■□□□□ 0.62
CALR-204ENST00000586967 TSPYL6Q8N831 410 aa18.91■□□□□ 0.62
CALR-204ENST00000586967 CACNA1FO60840 1977 aa18.9■□□□□ 0.62
CALR-204ENST00000586967 TRIM37O94972 964 aa18.89■□□□□ 0.61
CALR-204ENST00000586967 STARD3NLO95772 234 aa18.89■□□□□ 0.61
CALR-204ENST00000586967 RARSP54136 660 aaKnown RBP18.89■□□□□ 0.61
CALR-204ENST00000586967 SMC4Q9NTJ3 1288 aa18.89■□□□□ 0.61
CALR-204ENST00000586967 ERBB4Q15303 1308 aa18.89■□□□□ 0.61
CALR-204ENST00000586967 CICQ96RK0 1608 aaPredicted RBP18.89■□□□□ 0.61
CALR-204ENST00000586967 LOC102724428A0A0B4J2F2 783 aa18.88■□□□□ 0.61
CALR-204ENST00000586967 SIK1P57059 783 aa18.88■□□□□ 0.61
CALR-204ENST00000586967 KRT24Q2M2I5 525 aa18.88■□□□□ 0.61
CALR-204ENST00000586967 KIF16BQ96L93 1317 aa18.88■□□□□ 0.61
CALR-204ENST00000586967 BRPF1P55201 1214 aaPredicted RBP18.87■□□□□ 0.61
CALR-204ENST00000586967 SF3B2Q13435 895 aaKnown RBP18.87■□□□□ 0.61
CALR-204ENST00000586967 DBF4Q9UBU7 674 aaPredicted RBP18.87■□□□□ 0.61
CALR-204ENST00000586967 C5P01031 1676 aa18.86■□□□□ 0.61
CALR-204ENST00000586967 IPO8O15397 1037 aaKnown RBP18.86■□□□□ 0.61
CALR-204ENST00000586967 EIF2S2P20042 333 aaKnown RBP18.86■□□□□ 0.61
CALR-204ENST00000586967 ATP6V1AP38606 617 aa18.86■□□□□ 0.61
CALR-204ENST00000586967 LY75O60449 1722 aa18.86■□□□□ 0.61
CALR-204ENST00000586967 CANXP27824 592 aaKnown RBP18.85■□□□□ 0.61
CALR-204ENST00000586967 SLC27A3Q5K4L6 730 aa18.85■□□□□ 0.61
CALR-204ENST00000586967 CCDC125Q86Z20 511 aa18.85■□□□□ 0.61
CALR-204ENST00000586967 RGPD3A6NKT7 1758 aaPredicted RBP18.84■□□□□ 0.61
CALR-204ENST00000586967 RGPD4Q7Z3J3 1758 aa18.84■□□□□ 0.61
CALR-204ENST00000586967 PLSCR1O15162 318 aa18.84■□□□□ 0.61
CALR-204ENST00000586967 MS4A1P11836 297 aa18.84■□□□□ 0.61
CALR-204ENST00000586967 SSH1Q8WYL5 1049 aa18.84■□□□□ 0.61
CALR-204ENST00000586967 HYPKQ9NX55 129 aa18.84■□□□□ 0.61
CALR-204ENST00000586967 APBA3O96018 575 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms