RNA–Protein interactions for RNA: ENST00000586912.1

CCNE1-207, Transcript of cyclin E1, humanhuman

TSL 5

Gene CCNE1, Length 415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-207ENST00000586912 LINC00116Q8NCU8 138 aa22.16■■□□□ 1.14
CCNE1-207ENST00000586912 ATP6V1AP38606 617 aa22.15■■□□□ 1.14
CCNE1-207ENST00000586912 PTGER2P43116 358 aa22.15■■□□□ 1.14
CCNE1-207ENST00000586912 SMIM5Q71RC9 77 aa22.14■■□□□ 1.13
CCNE1-207ENST00000586912 AMIGO3Q86WK7 504 aa22.14■■□□□ 1.13
CCNE1-207ENST00000586912 COL23A1Q86Y22 540 aaPredicted RBP22.13■■□□□ 1.13
CCNE1-207ENST00000586912 RBM42Q9BTD8 480 aaKnown RBP22.13■■□□□ 1.13
CCNE1-207ENST00000586912 MTFR1LQ9H019 292 aa22.13■■□□□ 1.13
CCNE1-207ENST00000586912 SLC52A2Q9HAB3 445 aa22.13■■□□□ 1.13
CCNE1-207ENST00000586912 FCHSD2O94868 740 aa22.12■■□□□ 1.13
CCNE1-207ENST00000586912 IL17REQ8NFR9 667 aa22.12■■□□□ 1.13
CCNE1-207ENST00000586912 GAS2L2Q8NHY3 880 aa22.12■■□□□ 1.13
CCNE1-207ENST00000586912 SGIP1Q9BQI5 828 aa22.11■■□□□ 1.13
CCNE1-207ENST00000586912 PTCD1O75127 700 aaKnown RBP22.1■■□□□ 1.13
CCNE1-207ENST00000586912 GNAT3A8MTJ3 354 aa22.09■■□□□ 1.13
CCNE1-207ENST00000586912 SLC39A6Q13433 755 aa22.09■■□□□ 1.13
CCNE1-207ENST00000586912 C5P01031 1676 aa22.09■■□□□ 1.13
CCNE1-207ENST00000586912 SLC16A10Q8TF71 515 aa22.08■■□□□ 1.13
CCNE1-207ENST00000586912 AK7Q96M32 723 aa22.08■■□□□ 1.13
CCNE1-207ENST00000586912 PPP1R1BQ9UD71 204 aaPredicted RBP22.08■■□□□ 1.13
CCNE1-207ENST00000586912 MAP3K5Q99683 1374 aa22.08■■□□□ 1.12
CCNE1-207ENST00000586912 SCN11AQ9UI33 1791 aa22.07■■□□□ 1.12
CCNE1-207ENST00000586912 MSH5O43196 834 aa22.07■■□□□ 1.12
CCNE1-207ENST00000586912 TUBGCP6Q96RT7 1819 aa22.07■■□□□ 1.12
CCNE1-207ENST00000586912 MYBBP1AQ9BQG0 1328 aaKnown RBP22.06■■□□□ 1.12
CCNE1-207ENST00000586912 C4BP0C0L5 1744 aa22.06■■□□□ 1.12
CCNE1-207ENST00000586912 TAF1LQ8IZX4 1826 aa22.06■■□□□ 1.12
CCNE1-207ENST00000586912 HMGB2P26583 209 aaKnown RBP22.06■■□□□ 1.12
CCNE1-207ENST00000586912 MRC1P22897 1456 aa22.05■■□□□ 1.12
CCNE1-207ENST00000586912 ZNF316A6NFI3 1004 aaPredicted RBP22.05■■□□□ 1.12
CCNE1-207ENST00000586912 PHF14O94880 888 aa22.05■■□□□ 1.12
CCNE1-207ENST00000586912 PLEKHF1Q96S99 279 aa22.05■■□□□ 1.12
CCNE1-207ENST00000586912 PRKRIP1Q9H875 184 aaPredicted RBP22.05■■□□□ 1.12
CCNE1-207ENST00000586912 ADAMTS7Q9UKP4 1686 aa22.04■■□□□ 1.12
CCNE1-207ENST00000586912 QSER1Q2KHR3 1735 aa22.04■■□□□ 1.12
CCNE1-207ENST00000586912 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.03■■□□□ 1.12
CCNE1-207ENST00000586912 GNPATO15228 680 aa22.03■■□□□ 1.12
CCNE1-207ENST00000586912 MSL1Q68DK7 614 aa22.02■■□□□ 1.12
CCNE1-207ENST00000586912 FLAD1Q8NFF5 587 aa22.02■■□□□ 1.12
CCNE1-207ENST00000586912 CEMIPQ8WUJ3 1361 aa22.01■■□□□ 1.11
CCNE1-207ENST00000586912 DCTN1Q14203 1278 aa22.01■■□□□ 1.11
CCNE1-207ENST00000586912 MCM10Q7L590 875 aa22.01■■□□□ 1.11
CCNE1-207ENST00000586912 ARXQ96QS3 562 aa22.01■■□□□ 1.11
CCNE1-207ENST00000586912 SSFA2P28290 1259 aa22■■□□□ 1.11
CCNE1-207ENST00000586912 TEFQ10587 303 aa22■■□□□ 1.11
CCNE1-207ENST00000586912 RC3H1Q5TC82 1133 aaKnown RBP22■■□□□ 1.11
CCNE1-207ENST00000586912 DNAJC10Q8IXB1 793 aa22■■□□□ 1.11
CCNE1-207ENST00000586912 FHDC1Q9C0D6 1143 aaPredicted RBP21.99■■□□□ 1.11
CCNE1-207ENST00000586912 CNTNAP4Q9C0A0 1308 aa21.99■■□□□ 1.11
CCNE1-207ENST00000586912 KCNQ3O43525 872 aa21.98■■□□□ 1.11
CCNE1-207ENST00000586912 KCPQ6ZWJ8 1503 aa21.97■■□□□ 1.11
CCNE1-207ENST00000586912 RPS6KA4O75676 772 aa21.97■■□□□ 1.11
CCNE1-207ENST00000586912 POLD1P28340 1107 aa21.97■■□□□ 1.11
CCNE1-207ENST00000586912 CRKLP46109 303 aaKnown RBP21.97■■□□□ 1.11
CCNE1-207ENST00000586912 RTF1Q92541 710 aaKnown RBP21.97■■□□□ 1.11
CCNE1-207ENST00000586912 RTCBQ9Y3I0 505 aaKnown RBP21.97■■□□□ 1.11
CCNE1-207ENST00000586912 ZNF831Q5JPB2 1677 aa21.97■■□□□ 1.11
CCNE1-207ENST00000586912 UBR3Q6ZT12 1888 aa21.96■■□□□ 1.11
CCNE1-207ENST00000586912 TRAPPC3LQ5T215 181 aa21.96■■□□□ 1.11
CCNE1-207ENST00000586912 INTS5Q6P9B9 1019 aaKnown RBP21.96■■□□□ 1.11
CCNE1-207ENST00000586912 ZNF790Q6PG37 636 aa21.96■■□□□ 1.11
CCNE1-207ENST00000586912 ARHGEF1Q92888 912 aaKnown RBP21.96■■□□□ 1.11
CCNE1-207ENST00000586912 ZNF496Q96IT1 587 aaPredicted RBP21.96■■□□□ 1.11
CCNE1-207ENST00000586912 SYT17Q9BSW7 474 aa21.96■■□□□ 1.11
CCNE1-207ENST00000586912 VIRMAQ69YN4 1812 aaKnown RBP21.96■■□□□ 1.11
CCNE1-207ENST00000586912 HTATSF1O43719 755 aaKnown RBP21.95■■□□□ 1.1
CCNE1-207ENST00000586912 BTBD11A6QL63 1104 aa21.94■■□□□ 1.1
CCNE1-207ENST00000586912 CYP19A1P11511 503 aaPredicted RBP21.94■■□□□ 1.1
CCNE1-207ENST00000586912 NFE2L2Q16236 605 aa21.94■■□□□ 1.1
CCNE1-207ENST00000586912 TTC5Q8N0Z6 440 aa21.94■■□□□ 1.1
CCNE1-207ENST00000586912 NEFMP07197 916 aa21.93■■□□□ 1.1
CCNE1-207ENST00000586912 COL5A3P25940 1745 aaPredicted RBP21.93■■□□□ 1.1
CCNE1-207ENST00000586912 TJP1Q07157 1748 aa21.93■■□□□ 1.1
CCNE1-207ENST00000586912 COL24A1Q17RW2 1714 aa21.93■■□□□ 1.1
CCNE1-207ENST00000586912 VSIG10Q8N0Z9 540 aa21.93■■□□□ 1.1
CCNE1-207ENST00000586912 PNNQ9H307 717 aaKnown RBP21.93■■□□□ 1.1
CCNE1-207ENST00000586912 MYH14Q7Z406 1995 aaKnown RBP21.92■■□□□ 1.1
CCNE1-207ENST00000586912 MAPK8IP3Q9UPT6 1336 aa21.91■■□□□ 1.1
CCNE1-207ENST00000586912 CCDC146Q8IYE0 955 aa21.91■■□□□ 1.1
CCNE1-207ENST00000586912 THUMPD2Q9BTF0 503 aaKnown RBP21.91■■□□□ 1.1
CCNE1-207ENST00000586912 CCDC87Q9NVE4 849 aa21.91■■□□□ 1.1
CCNE1-207ENST00000586912 MIS18AQ9NYP9 233 aa21.91■■□□□ 1.1
CCNE1-207ENST00000586912 ADAMTS8Q9UP79 889 aa21.91■■□□□ 1.1
CCNE1-207ENST00000586912 ADRA2BP18089 450 aa21.9■■□□□ 1.1
CCNE1-207ENST00000586912 KLHL34Q8N239 644 aa21.9■■□□□ 1.1
CCNE1-207ENST00000586912 SIPA1L3O60292 1781 aaPredicted RBP21.89■■□□□ 1.1
CCNE1-207ENST00000586912 HEG1Q9ULI3 1381 aa21.89■■□□□ 1.1
CCNE1-207ENST00000586912 CCDC184Q52MB2 194 aa21.89■■□□□ 1.09
CCNE1-207ENST00000586912 ZBTB1Q9Y2K1 713 aa21.89■■□□□ 1.09
CCNE1-207ENST00000586912 RFC4P35249 363 aa21.88■■□□□ 1.09
CCNE1-207ENST00000586912 WDR43Q15061 677 aaKnown RBP eCLIP21.88■■□□□ 1.09
CCNE1-207ENST00000586912 TAF7Q15545 349 aaPredicted RBP21.88■■□□□ 1.09
CCNE1-207ENST00000586912 FMNL2Q96PY5 1086 aa21.88■■□□□ 1.09
CCNE1-207ENST00000586912 SRP68Q9UHB9 627 aaKnown RBP21.88■■□□□ 1.09
CCNE1-207ENST00000586912 CICQ96RK0 1608 aaPredicted RBP21.88■■□□□ 1.09
CCNE1-207ENST00000586912 PRAMEF22A3QJZ6 481 aa21.87■■□□□ 1.09
CCNE1-207ENST00000586912 GYS1P13807 737 aa21.87■■□□□ 1.09
CCNE1-207ENST00000586912 TMPOP42166 694 aaKnown RBP21.87■■□□□ 1.09
CCNE1-207ENST00000586912 RIPK4P57078 832 aa21.87■■□□□ 1.09
CCNE1-207ENST00000586912 RRP7AQ9Y3A4 280 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms