RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 LOC102724428A0A0B4J2F2 783 aa17.73■□□□□ 0.43
SMARCA4-210ENST00000586892 RNMTO43148 476 aaKnown RBP17.73■□□□□ 0.43
SMARCA4-210ENST00000586892 SIK1P57059 783 aa17.73■□□□□ 0.43
SMARCA4-210ENST00000586892 NFATC2IPQ8NCF5 419 aa17.73■□□□□ 0.43
SMARCA4-210ENST00000586892 PRKRIP1Q9H875 184 aaPredicted RBP17.73■□□□□ 0.43
SMARCA4-210ENST00000586892 MAP3K5Q99683 1374 aa17.73■□□□□ 0.43
SMARCA4-210ENST00000586892 GNAT3A8MTJ3 354 aa17.72■□□□□ 0.43
SMARCA4-210ENST00000586892 PHACTR3Q96KR7 559 aa17.72■□□□□ 0.43
SMARCA4-210ENST00000586892 SLC52A2Q9HAB3 445 aa17.72■□□□□ 0.43
SMARCA4-210ENST00000586892 LGR6Q9HBX8 967 aa17.72■□□□□ 0.43
SMARCA4-210ENST00000586892 TFCP2L1Q9NZI6 479 aa17.72■□□□□ 0.43
SMARCA4-210ENST00000586892 C4BP0C0L5 1744 aa17.72■□□□□ 0.43
SMARCA4-210ENST00000586892 PDGFDQ9GZP0 370 aaPredicted RBP17.71■□□□□ 0.43
SMARCA4-210ENST00000586892 SPON1Q9HCB6 807 aa17.71■□□□□ 0.43
SMARCA4-210ENST00000586892 NEFMP07197 916 aa17.69■□□□□ 0.42
SMARCA4-210ENST00000586892 ATP6V1AP38606 617 aa17.69■□□□□ 0.42
SMARCA4-210ENST00000586892 PNNQ9H307 717 aaKnown RBP17.69■□□□□ 0.42
SMARCA4-210ENST00000586892 PNPLA7Q6ZV29 1317 aa17.69■□□□□ 0.42
SMARCA4-210ENST00000586892 MTFR1LQ9H019 292 aa17.68■□□□□ 0.42
SMARCA4-210ENST00000586892 SIPA1L3O60292 1781 aaPredicted RBP17.67■□□□□ 0.42
SMARCA4-210ENST00000586892 ZBTB7AO95365 584 aa17.67■□□□□ 0.42
SMARCA4-210ENST00000586892 AK7Q96M32 723 aa17.67■□□□□ 0.42
SMARCA4-210ENST00000586892 RBM42Q9BTD8 480 aaKnown RBP17.67■□□□□ 0.42
SMARCA4-210ENST00000586892 UBR3Q6ZT12 1888 aa17.67■□□□□ 0.42
SMARCA4-210ENST00000586892 COL5A3P25940 1745 aaPredicted RBP17.67■□□□□ 0.42
SMARCA4-210ENST00000586892 CEMIPQ8WUJ3 1361 aa17.66■□□□□ 0.42
SMARCA4-210ENST00000586892 CICQ96RK0 1608 aaPredicted RBP17.66■□□□□ 0.42
SMARCA4-210ENST00000586892 TEFQ10587 303 aa17.66■□□□□ 0.42
SMARCA4-210ENST00000586892 ITPK1Q13572 414 aa17.66■□□□□ 0.42
SMARCA4-210ENST00000586892 LINC00116Q8NCU8 138 aa17.66■□□□□ 0.42
SMARCA4-210ENST00000586892 FLAD1Q8NFF5 587 aa17.66■□□□□ 0.42
SMARCA4-210ENST00000586892 IL17REQ8NFR9 667 aa17.66■□□□□ 0.42
SMARCA4-210ENST00000586892 SLC16A10Q8TF71 515 aa17.66■□□□□ 0.42
SMARCA4-210ENST00000586892 PLEKHF1Q96S99 279 aa17.66■□□□□ 0.42
SMARCA4-210ENST00000586892 PTCD1O75127 700 aaKnown RBP17.65■□□□□ 0.42
SMARCA4-210ENST00000586892 RTF1Q92541 710 aaKnown RBP17.65■□□□□ 0.42
SMARCA4-210ENST00000586892 SLC4A9Q96Q91 983 aa17.65■□□□□ 0.42
SMARCA4-210ENST00000586892 HTATSF1O43719 755 aaKnown RBP17.64■□□□□ 0.41
SMARCA4-210ENST00000586892 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
SMARCA4-210ENST00000586892 DLG5Q8TDM6 1919 aa17.64■□□□□ 0.41
SMARCA4-210ENST00000586892 UBR2Q8IWV8 1755 aa17.63■□□□□ 0.41
SMARCA4-210ENST00000586892 ATF5Q9Y2D1 282 aaPredicted RBP17.63■□□□□ 0.41
SMARCA4-210ENST00000586892 KCPQ6ZWJ8 1503 aa17.62■□□□□ 0.41
SMARCA4-210ENST00000586892 TJP1Q07157 1748 aa17.62■□□□□ 0.41
SMARCA4-210ENST00000586892 COL24A1Q17RW2 1714 aa17.62■□□□□ 0.41
SMARCA4-210ENST00000586892 SSFA2P28290 1259 aa17.62■□□□□ 0.41
SMARCA4-210ENST00000586892 PTGER2P43116 358 aa17.62■□□□□ 0.41
SMARCA4-210ENST00000586892 SLC39A6Q13433 755 aa17.62■□□□□ 0.41
SMARCA4-210ENST00000586892 WDR43Q15061 677 aaKnown RBP eCLIP17.62■□□□□ 0.41
SMARCA4-210ENST00000586892 COL23A1Q86Y22 540 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-210ENST00000586892 PPP1R1BQ9UD71 204 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-210ENST00000586892 MSH5O43196 834 aa17.61■□□□□ 0.41
SMARCA4-210ENST00000586892 RC3H1Q5TC82 1133 aaKnown RBP17.61■□□□□ 0.41
SMARCA4-210ENST00000586892 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
SMARCA4-210ENST00000586892 CNTNAP4Q9C0A0 1308 aa17.61■□□□□ 0.41
SMARCA4-210ENST00000586892 GNPATO15228 680 aa17.6■□□□□ 0.41
SMARCA4-210ENST00000586892 NFE2L2Q16236 605 aa17.6■□□□□ 0.41
SMARCA4-210ENST00000586892 MCM10Q7L590 875 aa17.6■□□□□ 0.41
SMARCA4-210ENST00000586892 SGIP1Q9BQI5 828 aa17.6■□□□□ 0.41
SMARCA4-210ENST00000586892 MYH14Q7Z406 1995 aaKnown RBP17.6■□□□□ 0.41
SMARCA4-210ENST00000586892 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-210ENST00000586892 ZNF790Q6PG37 636 aa17.59■□□□□ 0.41
SMARCA4-210ENST00000586892 VSIG10Q8N0Z9 540 aa17.59■□□□□ 0.41
SMARCA4-210ENST00000586892 PHF14O94880 888 aa17.58■□□□□ 0.4
SMARCA4-210ENST00000586892 AMIGO3Q86WK7 504 aa17.58■□□□□ 0.4
SMARCA4-210ENST00000586892 RTCBQ9Y3I0 505 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-210ENST00000586892 BTBD11A6QL63 1104 aa17.57■□□□□ 0.4
SMARCA4-210ENST00000586892 ANP32CO43423 234 aa17.57■□□□□ 0.4
SMARCA4-210ENST00000586892 POLD1P28340 1107 aa17.57■□□□□ 0.4
SMARCA4-210ENST00000586892 DCTN1Q14203 1278 aa17.57■□□□□ 0.4
SMARCA4-210ENST00000586892 ADRA2BP18089 450 aa17.56■□□□□ 0.4
SMARCA4-210ENST00000586892 CRKLP46109 303 aaKnown RBP17.56■□□□□ 0.4
SMARCA4-210ENST00000586892 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
SMARCA4-210ENST00000586892 ADAMTS8Q9UP79 889 aa17.56■□□□□ 0.4
SMARCA4-210ENST00000586892 RPS6KA4O75676 772 aa17.55■□□□□ 0.4
SMARCA4-210ENST00000586892 RUNDC1Q96C34 613 aa17.55■□□□□ 0.4
SMARCA4-210ENST00000586892 ZNF496Q96IT1 587 aaPredicted RBP17.55■□□□□ 0.4
SMARCA4-210ENST00000586892 ARXQ96QS3 562 aa17.55■□□□□ 0.4
SMARCA4-210ENST00000586892 HEG1Q9ULI3 1381 aa17.54■□□□□ 0.4
SMARCA4-210ENST00000586892 TAF7Q15545 349 aaPredicted RBP17.54■□□□□ 0.4
SMARCA4-210ENST00000586892 TRAPPC3LQ5T215 181 aa17.54■□□□□ 0.4
SMARCA4-210ENST00000586892 SMIM5Q71RC9 77 aa17.54■□□□□ 0.4
SMARCA4-210ENST00000586892 FMNL2Q96PY5 1086 aa17.54■□□□□ 0.4
SMARCA4-210ENST00000586892 CYP19A1P11511 503 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-210ENST00000586892 TMPOP42166 694 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-210ENST00000586892 RIPK4P57078 832 aa17.53■□□□□ 0.4
SMARCA4-210ENST00000586892 LMOD3Q0VAK6 560 aa17.53■□□□□ 0.4
SMARCA4-210ENST00000586892 CCDC146Q8IYE0 955 aa17.53■□□□□ 0.4
SMARCA4-210ENST00000586892 TEX13AQ9BXU3 409 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-210ENST00000586892 CCDC87Q9NVE4 849 aa17.53■□□□□ 0.4
SMARCA4-210ENST00000586892 C4AP0C0L4 1744 aa17.52■□□□□ 0.4
SMARCA4-210ENST00000586892 STARD3NLO95772 234 aa17.52■□□□□ 0.4
SMARCA4-210ENST00000586892 MSL1Q68DK7 614 aa17.52■□□□□ 0.4
SMARCA4-210ENST00000586892 INTS5Q6P9B9 1019 aaKnown RBP17.52■□□□□ 0.4
SMARCA4-210ENST00000586892 RFC4P35249 363 aa17.51■□□□□ 0.39
SMARCA4-210ENST00000586892 PNISRQ8TF01 805 aaKnown RBP17.51■□□□□ 0.39
SMARCA4-210ENST00000586892 ARHGEF1Q92888 912 aaKnown RBP17.51■□□□□ 0.39
SMARCA4-210ENST00000586892 KDM3BQ7LBC6 1761 aa17.51■□□□□ 0.39
SMARCA4-210ENST00000586892 KCNQ3O43525 872 aa17.5■□□□□ 0.39
SMARCA4-210ENST00000586892 FHDC1Q9C0D6 1143 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms