RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 EN1Q05925 392 aaPredicted RBP25.21■■□□□ 1.63
DDX39A-204ENST00000586558 MCM10Q7L590 875 aa25.21■■□□□ 1.63
DDX39A-204ENST00000586558 CAMKK2Q96RR4 588 aa25.21■■□□□ 1.63
DDX39A-204ENST00000586558 RRP7AQ9Y3A4 280 aaKnown RBP25.2■■□□□ 1.62
DDX39A-204ENST00000586558 DLG5Q8TDM6 1919 aa25.2■■□□□ 1.62
DDX39A-204ENST00000586558 NCBP3Q53F19 620 aaKnown RBP25.19■■□□□ 1.62
DDX39A-204ENST00000586558 PALLDQ8WX93 1383 aa25.18■■□□□ 1.62
DDX39A-204ENST00000586558 NEUROD2Q15784 382 aa25.18■■□□□ 1.62
DDX39A-204ENST00000586558 VIRMAQ69YN4 1812 aaKnown RBP25.18■■□□□ 1.62
DDX39A-204ENST00000586558 DCTN1Q14203 1278 aa25.17■■□□□ 1.62
DDX39A-204ENST00000586558 ASAP1Q9ULH1 1129 aa25.17■■□□□ 1.62
DDX39A-204ENST00000586558 EZH2Q15910 746 aaKnown RBP25.16■■□□□ 1.62
DDX39A-204ENST00000586558 ATG3Q9NT62 314 aa25.16■■□□□ 1.62
DDX39A-204ENST00000586558 TXNRD1Q16881 649 aa25.15■■□□□ 1.62
DDX39A-204ENST00000586558 SLC27A3Q5K4L6 730 aa25.15■■□□□ 1.62
DDX39A-204ENST00000586558 NGEFQ8N5V2 710 aa25.15■■□□□ 1.62
DDX39A-204ENST00000586558 TRIM35Q9UPQ4 493 aa25.15■■□□□ 1.62
DDX39A-204ENST00000586558 SIPA1L3O60292 1781 aaPredicted RBP25.15■■□□□ 1.62
DDX39A-204ENST00000586558 RREB1Q92766 1687 aa25.13■■□□□ 1.61
DDX39A-204ENST00000586558 PAPPAQ13219 1627 aa25.13■■□□□ 1.61
DDX39A-204ENST00000586558 LY75O60449 1722 aa25.13■■□□□ 1.61
DDX39A-204ENST00000586558 HMGB2P26583 209 aaKnown RBP25.13■■□□□ 1.61
DDX39A-204ENST00000586558 TAF7Q15545 349 aaPredicted RBP25.13■■□□□ 1.61
DDX39A-204ENST00000586558 CCDC27Q2M243 656 aa25.13■■□□□ 1.61
DDX39A-204ENST00000586558 PROM2Q8N271 834 aa25.12■■□□□ 1.61
DDX39A-204ENST00000586558 THUMPD2Q9BTF0 503 aaKnown RBP25.12■■□□□ 1.61
DDX39A-204ENST00000586558 BTBD11A6QL63 1104 aa25.11■■□□□ 1.61
DDX39A-204ENST00000586558 CALD1Q05682 793 aaKnown RBP25.11■■□□□ 1.61
DDX39A-204ENST00000586558 LOC102724428A0A0B4J2F2 783 aa25.1■■□□□ 1.61
DDX39A-204ENST00000586558 SIK1P57059 783 aa25.1■■□□□ 1.61
DDX39A-204ENST00000586558 TTC5Q8N0Z6 440 aa25.1■■□□□ 1.61
DDX39A-204ENST00000586558 CCNL1Q9UK58 526 aaPredicted RBP25.1■■□□□ 1.61
DDX39A-204ENST00000586558 ZNF790Q6PG37 636 aa25.09■■□□□ 1.61
DDX39A-204ENST00000586558 BABAM1Q9NWV8 329 aa25.09■■□□□ 1.61
DDX39A-204ENST00000586558 SLC39A6Q13433 755 aa25.08■■□□□ 1.61
DDX39A-204ENST00000586558 ZNF831Q5JPB2 1677 aa25.07■■□□□ 1.6
DDX39A-204ENST00000586558 KCPQ6ZWJ8 1503 aa25.07■■□□□ 1.6
DDX39A-204ENST00000586558 NUP188Q5SRE5 1749 aa25.06■■□□□ 1.6
DDX39A-204ENST00000586558 PTCD1O75127 700 aaKnown RBP25.06■■□□□ 1.6
DDX39A-204ENST00000586558 RBM42Q9BTD8 480 aaKnown RBP25.06■■□□□ 1.6
DDX39A-204ENST00000586558 LRRC4BQ9NT99 713 aa25.06■■□□□ 1.6
DDX39A-204ENST00000586558 WWC1Q8IX03 1113 aa25.05■■□□□ 1.6
DDX39A-204ENST00000586558 UBR2Q8IWV8 1755 aa25.05■■□□□ 1.6
DDX39A-204ENST00000586558 VSIG10Q8N0Z9 540 aa25.04■■□□□ 1.6
DDX39A-204ENST00000586558 CICQ96RK0 1608 aaPredicted RBP25.04■■□□□ 1.6
DDX39A-204ENST00000586558 ATP6V1AP38606 617 aa25.03■■□□□ 1.6
DDX39A-204ENST00000586558 FMNL2Q96PY5 1086 aa25.03■■□□□ 1.6
DDX39A-204ENST00000586558 NBPF14Q5TI25 921 aa25.02■■□□□ 1.6
DDX39A-204ENST00000586558 ZNF496Q96IT1 587 aaPredicted RBP25.02■■□□□ 1.6
DDX39A-204ENST00000586558 CFAP44Q96MT7 982 aa25.02■■□□□ 1.6
DDX39A-204ENST00000586558 SLC4A9Q96Q91 983 aa25.02■■□□□ 1.6
DDX39A-204ENST00000586558 TSPYL4Q9UJ04 414 aa25.02■■□□□ 1.6
DDX39A-204ENST00000586558 KDM3BQ7LBC6 1761 aa25.01■■□□□ 1.59
DDX39A-204ENST00000586558 CHL1O00533 1208 aa25.01■■□□□ 1.59
DDX39A-204ENST00000586558 IFT57Q9NWB7 429 aa25.01■■□□□ 1.59
DDX39A-204ENST00000586558 IL16Q14005 1332 aa25.01■■□□□ 1.59
DDX39A-204ENST00000586558 SENP3-EIF4A1A0A087X0R7 540 aa25■■□□□ 1.59
DDX39A-204ENST00000586558 KCNQ4P56696 695 aa25■■□□□ 1.59
DDX39A-204ENST00000586558 GNAI1P63096 354 aa25■■□□□ 1.59
DDX39A-204ENST00000586558 WDR63Q8IWG1 891 aa25■■□□□ 1.59
DDX39A-204ENST00000586558 MIS18AQ9NYP9 233 aa25■■□□□ 1.59
DDX39A-204ENST00000586558 HEG1Q9ULI3 1381 aa25■■□□□ 1.59
DDX39A-204ENST00000586558 C5P01031 1676 aa25■■□□□ 1.59
DDX39A-204ENST00000586558 KCNQ3O43525 872 aa24.99■■□□□ 1.59
DDX39A-204ENST00000586558 ITPK1Q13572 414 aa24.99■■□□□ 1.59
DDX39A-204ENST00000586558 ZNF853P0CG23 659 aa24.98■■□□□ 1.59
DDX39A-204ENST00000586558 TEX13AQ9BXU3 409 aaPredicted RBP24.98■■□□□ 1.59
DDX39A-204ENST00000586558 STK32BQ9NY57 414 aa24.98■■□□□ 1.59
DDX39A-204ENST00000586558 SALL2Q9Y467 1007 aaPredicted RBP24.98■■□□□ 1.59
DDX39A-204ENST00000586558 LAS1LQ9Y4W2 734 aaKnown RBP24.97■■□□□ 1.59
DDX39A-204ENST00000586558 TJP1Q07157 1748 aa24.96■■□□□ 1.59
DDX39A-204ENST00000586558 EIF4A1P60842 406 aaKnown RBP24.96■■□□□ 1.59
DDX39A-204ENST00000586558 LINC00116Q8NCU8 138 aa24.96■■□□□ 1.59
DDX39A-204ENST00000586558 ANO8Q9HCE9 1232 aaPredicted RBP24.96■■□□□ 1.59
DDX39A-204ENST00000586558 TAF1LQ8IZX4 1826 aa24.96■■□□□ 1.59
DDX39A-204ENST00000586558 ZNF521Q96K83 1311 aa24.95■■□□□ 1.58
DDX39A-204ENST00000586558 SNRPA1P09661 255 aaKnown RBP24.95■■□□□ 1.58
DDX39A-204ENST00000586558 AKT1S1Q96B36 256 aa24.95■■□□□ 1.58
DDX39A-204ENST00000586558 C4BP0C0L5 1744 aa24.95■■□□□ 1.58
DDX39A-204ENST00000586558 CNTNAP4Q9C0A0 1308 aa24.94■■□□□ 1.58
DDX39A-204ENST00000586558 SLC15A2Q16348 729 aa24.94■■□□□ 1.58
DDX39A-204ENST00000586558 RC3H1Q5TC82 1133 aaKnown RBP24.94■■□□□ 1.58
DDX39A-204ENST00000586558 DNAJC10Q8IXB1 793 aa24.94■■□□□ 1.58
DDX39A-204ENST00000586558 COL5A3P25940 1745 aaPredicted RBP24.94■■□□□ 1.58
DDX39A-204ENST00000586558 STARD3NLO95772 234 aa24.93■■□□□ 1.58
DDX39A-204ENST00000586558 MBIPQ9NS73 344 aa24.93■■□□□ 1.58
DDX39A-204ENST00000586558 ZNF827Q17R98 1081 aa24.92■■□□□ 1.58
DDX39A-204ENST00000586558 AK7Q96M32 723 aa24.92■■□□□ 1.58
DDX39A-204ENST00000586558 CYP19A1P11511 503 aaPredicted RBP24.91■■□□□ 1.58
DDX39A-204ENST00000586558 GIGYF1O75420 1035 aaPredicted RBP24.9■■□□□ 1.58
DDX39A-204ENST00000586558 CRKLP46109 303 aaKnown RBP24.9■■□□□ 1.58
DDX39A-204ENST00000586558 TFCP2L1Q9NZI6 479 aa24.9■■□□□ 1.58
DDX39A-204ENST00000586558 CCDC87Q9NVE4 849 aa24.89■■□□□ 1.58
DDX39A-204ENST00000586558 HNRNPUQ00839 825 aaKnown RBP eCLIP24.88■■□□□ 1.57
DDX39A-204ENST00000586558 R3HDM1Q15032 1099 aaKnown RBP24.88■■□□□ 1.57
DDX39A-204ENST00000586558 MYH16Q9H6N6 1097 aa24.88■■□□□ 1.57
DDX39A-204ENST00000586558 GNPATO15228 680 aa24.87■■□□□ 1.57
DDX39A-204ENST00000586558 HOXB7P09629 217 aa24.87■■□□□ 1.57
DDX39A-204ENST00000586558 GOLGA2Q08379 1002 aa24.87■■□□□ 1.57
DDX39A-204ENST00000586558 FLAD1Q8NFF5 587 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms