RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 IFT57Q9NWB7 429 aa22.16■■□□□ 1.14
PRKCSH-203ENST00000586486 BABAM1Q9NWV8 329 aa22.16■■□□□ 1.14
PRKCSH-203ENST00000586486 TMOD3Q9NYL9 352 aa22.16■■□□□ 1.14
PRKCSH-203ENST00000586486 BTAF1O14981 1849 aa22.15■■□□□ 1.14
PRKCSH-203ENST00000586486 PRIM1P49642 420 aaKnown RBP22.15■■□□□ 1.14
PRKCSH-203ENST00000586486 GOLGA2Q08379 1002 aa22.15■■□□□ 1.14
PRKCSH-203ENST00000586486 TAF7Q15545 349 aaPredicted RBP22.15■■□□□ 1.14
PRKCSH-203ENST00000586486 NFATC2IPQ8NCF5 419 aa22.15■■□□□ 1.14
PRKCSH-203ENST00000586486 CFAP44Q96MT7 982 aa22.15■■□□□ 1.14
PRKCSH-203ENST00000586486 ZNF853P0CG23 659 aa22.14■■□□□ 1.14
PRKCSH-203ENST00000586486 ACSBG1Q96GR2 724 aa22.14■■□□□ 1.14
PRKCSH-203ENST00000586486 UBR2Q8IWV8 1755 aa22.14■■□□□ 1.13
PRKCSH-203ENST00000586486 GNAI1P63096 354 aa22.13■■□□□ 1.13
PRKCSH-203ENST00000586486 PIGBQ92521 554 aa22.13■■□□□ 1.13
PRKCSH-203ENST00000586486 TNS1Q9HBL0 1735 aaKnown RBP22.12■■□□□ 1.13
PRKCSH-203ENST00000586486 CHL1O00533 1208 aa22.12■■□□□ 1.13
PRKCSH-203ENST00000586486 KCNQ2O43526 872 aa22.12■■□□□ 1.13
PRKCSH-203ENST00000586486 SYTL4Q96C24 671 aaPredicted RBP22.12■■□□□ 1.13
PRKCSH-203ENST00000586486 BTBD11A6QL63 1104 aa22.1■■□□□ 1.13
PRKCSH-203ENST00000586486 E9PSI1 815 aa22.1■■□□□ 1.13
PRKCSH-203ENST00000586486 BCL11BQ9C0K0 894 aaPredicted RBP22.1■■□□□ 1.13
PRKCSH-203ENST00000586486 SPINK5Q9NQ38 1064 aaPredicted RBP22.09■■□□□ 1.13
PRKCSH-203ENST00000586486 SLFN5Q08AF3 891 aa22.09■■□□□ 1.13
PRKCSH-203ENST00000586486 MYH16Q9H6N6 1097 aa22.09■■□□□ 1.13
PRKCSH-203ENST00000586486 TSPYL4Q9UJ04 414 aa22.09■■□□□ 1.13
PRKCSH-203ENST00000586486 KCPQ6ZWJ8 1503 aa22.08■■□□□ 1.13
PRKCSH-203ENST00000586486 MBIPQ9NS73 344 aa22.08■■□□□ 1.13
PRKCSH-203ENST00000586486 LAS1LQ9Y4W2 734 aaKnown RBP22.08■■□□□ 1.13
PRKCSH-203ENST00000586486 ZNF790Q6PG37 636 aa22.07■■□□□ 1.12
PRKCSH-203ENST00000586486 TRMT2AQ8IZ69 625 aaKnown RBP22.07■■□□□ 1.12
PRKCSH-203ENST00000586486 CDCA7LQ96GN5 454 aa22.07■■□□□ 1.12
PRKCSH-203ENST00000586486 FANCIQ9NVI1 1328 aa22.07■■□□□ 1.12
PRKCSH-203ENST00000586486 PTF1AQ7RTS3 328 aa22.06■■□□□ 1.12
PRKCSH-203ENST00000586486 MIS18AQ9NYP9 233 aa22.06■■□□□ 1.12
PRKCSH-203ENST00000586486 ZNF831Q5JPB2 1677 aa22.06■■□□□ 1.12
PRKCSH-203ENST00000586486 RGPD3A6NKT7 1758 aaPredicted RBP22.06■■□□□ 1.12
PRKCSH-203ENST00000586486 RGPD4Q7Z3J3 1758 aa22.06■■□□□ 1.12
PRKCSH-203ENST00000586486 CICQ96RK0 1608 aaPredicted RBP22.06■■□□□ 1.12
PRKCSH-203ENST00000586486 TRIM37O94972 964 aa22.06■■□□□ 1.12
PRKCSH-203ENST00000586486 ATG3Q9NT62 314 aa22.06■■□□□ 1.12
PRKCSH-203ENST00000586486 LY75O60449 1722 aa22.05■■□□□ 1.12
PRKCSH-203ENST00000586486 TTC5Q8N0Z6 440 aa22.05■■□□□ 1.12
PRKCSH-203ENST00000586486 ASAP1Q9ULH1 1129 aa22.05■■□□□ 1.12
PRKCSH-203ENST00000586486 SLC39A6Q13433 755 aa22.04■■□□□ 1.12
PRKCSH-203ENST00000586486 SMARCC1Q92922 1105 aaPredicted RBP22.04■■□□□ 1.12
PRKCSH-203ENST00000586486 TSR2Q969E8 191 aaKnown RBP22.04■■□□□ 1.12
PRKCSH-203ENST00000586486 DUSP27Q5VZP5 1158 aa22.03■■□□□ 1.12
PRKCSH-203ENST00000586486 PALLDQ8WX93 1383 aa22.03■■□□□ 1.12
PRKCSH-203ENST00000586486 HEG1Q9ULI3 1381 aa22.03■■□□□ 1.12
PRKCSH-203ENST00000586486 KCNQ3O43525 872 aa22.02■■□□□ 1.12
PRKCSH-203ENST00000586486 EIF4A1P60842 406 aaKnown RBP22.02■■□□□ 1.11
PRKCSH-203ENST00000586486 LAMB4A4D0S4 1761 aa22■■□□□ 1.11
PRKCSH-203ENST00000586486 C5P01031 1676 aa22■■□□□ 1.11
PRKCSH-203ENST00000586486 ZNF496Q96IT1 587 aaPredicted RBP22■■□□□ 1.11
PRKCSH-203ENST00000586486 FMNL2Q96PY5 1086 aa22■■□□□ 1.11
PRKCSH-203ENST00000586486 TJP1Q07157 1748 aa21.99■■□□□ 1.11
PRKCSH-203ENST00000586486 SOS1Q07889 1333 aaPredicted RBP21.98■■□□□ 1.11
PRKCSH-203ENST00000586486 VSIG10Q8N0Z9 540 aa21.98■■□□□ 1.11
PRKCSH-203ENST00000586486 PLSCR1O15162 318 aa21.97■■□□□ 1.11
PRKCSH-203ENST00000586486 CCDC125Q86Z20 511 aa21.97■■□□□ 1.11
PRKCSH-203ENST00000586486 PTCD1O75127 700 aaKnown RBP21.96■■□□□ 1.11
PRKCSH-203ENST00000586486 HOXB7P09629 217 aa21.96■■□□□ 1.11
PRKCSH-203ENST00000586486 EXOSC9Q06265 439 aaKnown RBP21.96■■□□□ 1.11
PRKCSH-203ENST00000586486 COL5A3P25940 1745 aaPredicted RBP21.96■■□□□ 1.11
PRKCSH-203ENST00000586486 LOC102724428A0A0B4J2F2 783 aa21.95■■□□□ 1.1
PRKCSH-203ENST00000586486 GIGYF1O75420 1035 aaPredicted RBP21.95■■□□□ 1.1
PRKCSH-203ENST00000586486 APBA3O96018 575 aa21.95■■□□□ 1.1
PRKCSH-203ENST00000586486 SIK1P57059 783 aa21.95■■□□□ 1.1
PRKCSH-203ENST00000586486 KRT24Q2M2I5 525 aa21.95■■□□□ 1.1
PRKCSH-203ENST00000586486 ILDR2Q71H61 639 aa21.95■■□□□ 1.1
PRKCSH-203ENST00000586486 C8orf58Q8NAV2 365 aa21.95■■□□□ 1.1
PRKCSH-203ENST00000586486 TAF1LQ8IZX4 1826 aa21.94■■□□□ 1.1
PRKCSH-203ENST00000586486 SNRPA1P09661 255 aaKnown RBP21.94■■□□□ 1.1
PRKCSH-203ENST00000586486 SLC4A9Q96Q91 983 aa21.94■■□□□ 1.1
PRKCSH-203ENST00000586486 RBM42Q9BTD8 480 aaKnown RBP21.94■■□□□ 1.1
PRKCSH-203ENST00000586486 CT47B1P0C2W7 299 aaPredicted RBP21.93■■□□□ 1.1
PRKCSH-203ENST00000586486 SF3B2Q13435 895 aaKnown RBP21.92■■□□□ 1.1
PRKCSH-203ENST00000586486 TWISTNBQ3B726 338 aaPredicted RBP21.92■■□□□ 1.1
PRKCSH-203ENST00000586486 TSPYL6Q8N831 410 aa21.92■■□□□ 1.1
PRKCSH-203ENST00000586486 SLC27A3Q5K4L6 730 aa21.91■■□□□ 1.1
PRKCSH-203ENST00000586486 RREB1Q92766 1687 aa21.91■■□□□ 1.1
PRKCSH-203ENST00000586486 TEX13AQ9BXU3 409 aaPredicted RBP21.91■■□□□ 1.1
PRKCSH-203ENST00000586486 ATP6V1AP38606 617 aa21.9■■□□□ 1.1
PRKCSH-203ENST00000586486 CCNL1Q9UK58 526 aaPredicted RBP21.9■■□□□ 1.1
PRKCSH-203ENST00000586486 PRAMEF22A3QJZ6 481 aa21.89■■□□□ 1.09
PRKCSH-203ENST00000586486 VAMP4O75379 141 aa21.89■■□□□ 1.09
PRKCSH-203ENST00000586486 BAG6P46379 1132 aa21.89■■□□□ 1.09
PRKCSH-203ENST00000586486 ELL2O00472 640 aaPredicted RBP21.88■■□□□ 1.09
PRKCSH-203ENST00000586486 ITPK1Q13572 414 aa21.88■■□□□ 1.09
PRKCSH-203ENST00000586486 TXNRD1Q16881 649 aa21.88■■□□□ 1.09
PRKCSH-203ENST00000586486 DNAJC10Q8IXB1 793 aa21.88■■□□□ 1.09
PRKCSH-203ENST00000586486 ZNF428Q96B54 188 aa21.88■■□□□ 1.09
PRKCSH-203ENST00000586486 CHMP4AQ9BY43 222 aa21.88■■□□□ 1.09
PRKCSH-203ENST00000586486 UPF1Q92900 1129 aaKnown RBP eCLIP21.88■■□□□ 1.095e-15■■■■■ 62.2
PRKCSH-203ENST00000586486 HMGB2P26583 209 aaKnown RBP21.87■■□□□ 1.09
PRKCSH-203ENST00000586486 PROM2Q8N271 834 aa21.87■■□□□ 1.09
PRKCSH-203ENST00000586486 CAMKK2Q96RR4 588 aa21.87■■□□□ 1.09
PRKCSH-203ENST00000586486 USP16Q9Y5T5 823 aa21.87■■□□□ 1.09
PRKCSH-203ENST00000586486 C4BP0C0L5 1744 aa21.86■■□□□ 1.09
PRKCSH-203ENST00000586486 STARD3NLO95772 234 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms