RNA–Protein interactions for RNA: ENST00000585974.1

ZNF560-202, Transcript of zinc finger protein 560, humanhuman

TSL 3

Gene ZNF560, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-202ENST00000585974 RIPOR1Q6ZS17 1223 aa8.54□□□□□ -1.04
ZNF560-202ENST00000585974 TRIM50Q86XT4 487 aa8.54□□□□□ -1.04
ZNF560-202ENST00000585974 PLEKHM2Q8IWE5 1019 aa8.54□□□□□ -1.04
ZNF560-202ENST00000585974 CNTNAP3BQ96NU0 1288 aa8.54□□□□□ -1.04
ZNF560-202ENST00000585974 CNTNAP3Q9BZ76 1288 aa8.54□□□□□ -1.04
ZNF560-202ENST00000585974 KRT76Q01546 638 aa8.53□□□□□ -1.04
ZNF560-202ENST00000585974 TLR1Q15399 786 aa8.53□□□□□ -1.04
ZNF560-202ENST00000585974 PROSER2Q86WR7 435 aaPredicted RBP8.53□□□□□ -1.04
ZNF560-202ENST00000585974 FNBP4Q8N3X1 1017 aaPredicted RBP8.53□□□□□ -1.04
ZNF560-202ENST00000585974 ZNF837Q96EG3 531 aaPredicted RBP8.53□□□□□ -1.04
ZNF560-202ENST00000585974 TRERF1Q96PN7 1200 aa8.53□□□□□ -1.04
ZNF560-202ENST00000585974 GAS2L1Q99501 681 aaPredicted RBP8.53□□□□□ -1.04
ZNF560-202ENST00000585974 PCDHGA11Q9Y5H2 935 aa8.53□□□□□ -1.04
ZNF560-202ENST00000585974 PIK3CDO00329 1044 aa8.52□□□□□ -1.05
ZNF560-202ENST00000585974 SLURP2P0DP57 97 aa8.52□□□□□ -1.05
ZNF560-202ENST00000585974 SMTNP53814 917 aa8.52□□□□□ -1.05
ZNF560-202ENST00000585974 DBN1Q16643 649 aa8.52□□□□□ -1.05
ZNF560-202ENST00000585974 C1orf216Q8TAB5 229 aa8.52□□□□□ -1.05
ZNF560-202ENST00000585974 NIFKQ9BYG3 293 aaKnown RBP8.52□□□□□ -1.05
ZNF560-202ENST00000585974 CUEDC1Q9NWM3 386 aaPredicted RBP8.52□□□□□ -1.05
ZNF560-202ENST00000585974 USP17L5A8MUK1 530 aa8.51□□□□□ -1.05
ZNF560-202ENST00000585974 CDK2AP1O14519 115 aa8.51□□□□□ -1.05
ZNF560-202ENST00000585974 ATP1A2P50993 1020 aa8.51□□□□□ -1.05
ZNF560-202ENST00000585974 SRSF11Q05519 484 aaKnown RBP8.51□□□□□ -1.05
ZNF560-202ENST00000585974 C4orf17Q53FE4 359 aa8.51□□□□□ -1.05
ZNF560-202ENST00000585974 POM121CA8CG34 1229 aa8.5□□□□□ -1.05
ZNF560-202ENST00000585974 ATP9BO43861 1147 aa8.5□□□□□ -1.05
ZNF560-202ENST00000585974 CSB-PGBD3P0DP91 1061 aa8.5□□□□□ -1.05
ZNF560-202ENST00000585974 GTF2IP78347 998 aa8.5□□□□□ -1.05
ZNF560-202ENST00000585974 NCOA4Q13772 614 aa8.5□□□□□ -1.05
ZNF560-202ENST00000585974 MTFR1Q15390 333 aa8.5□□□□□ -1.05
ZNF560-202ENST00000585974 PGBD3Q8N328 593 aa8.5□□□□□ -1.05
ZNF560-202ENST00000585974 ADAMTS19Q8TE59 1207 aa8.5□□□□□ -1.05
ZNF560-202ENST00000585974 CFHR5Q9BXR6 569 aa8.5□□□□□ -1.05
ZNF560-202ENST00000585974 NUCKS1Q9H1E3 243 aaKnown RBP8.5□□□□□ -1.05
ZNF560-202ENST00000585974 TMEM229AB2RXF0 380 aa8.49□□□□□ -1.05
ZNF560-202ENST00000585974 RNFT1Q5M7Z0 435 aa8.49□□□□□ -1.05
ZNF560-202ENST00000585974 CLUAP1Q96AJ1 413 aa8.49□□□□□ -1.05
ZNF560-202ENST00000585974 NSFL1CQ9UNZ2 370 aaKnown RBP8.49□□□□□ -1.05
ZNF560-202ENST00000585974 PHF24Q9UPV7 400 aa8.49□□□□□ -1.05
ZNF560-202ENST00000585974 A6NJY4 79 aa8.48□□□□□ -1.05
ZNF560-202ENST00000585974 EFHC2Q5JST6 749 aa8.48□□□□□ -1.05
ZNF560-202ENST00000585974 MBIPQ9NS73 344 aa8.48□□□□□ -1.05
ZNF560-202ENST00000585974 PHKA2P46019 1235 aa8.47□□□□□ -1.05
ZNF560-202ENST00000585974 TBC1D9Q6ZT07 1266 aa8.47□□□□□ -1.05
ZNF560-202ENST00000585974 GTPBP3Q969Y2 492 aaKnown RBP8.47□□□□□ -1.05
ZNF560-202ENST00000585974 CRISPLD1Q9H336 500 aa8.47□□□□□ -1.05
ZNF560-202ENST00000585974 USP17L3A6NCW0 530 aa8.46□□□□□ -1.06
ZNF560-202ENST00000585974 USP17L4A6NCW7 530 aa8.46□□□□□ -1.06
ZNF560-202ENST00000585974 ADAMTS2O95450 1211 aa8.46□□□□□ -1.06
ZNF560-202ENST00000585974 MSX1P28360 303 aa8.46□□□□□ -1.06
ZNF560-202ENST00000585974 PSME1Q06323 249 aa8.46□□□□□ -1.06
ZNF560-202ENST00000585974 GAS6Q14393 721 aa8.46□□□□□ -1.06
ZNF560-202ENST00000585974 USP17L2Q6R6M4 530 aa8.46□□□□□ -1.06
ZNF560-202ENST00000585974 USP17L1Q7RTZ2 530 aa8.46□□□□□ -1.06
ZNF560-202ENST00000585974 LARGE2Q8N3Y3 721 aa8.46□□□□□ -1.06
ZNF560-202ENST00000585974 LRRC4BQ9NT99 713 aa8.46□□□□□ -1.06
ZNF560-202ENST00000585974 M0R2N6 131 aa8.45□□□□□ -1.06
ZNF560-202ENST00000585974 NBPF1Q3BBV0 1214 aa8.45□□□□□ -1.06
ZNF560-202ENST00000585974 GLMNQ92990 594 aa8.45□□□□□ -1.06
ZNF560-202ENST00000585974 UCN2Q96RP3 112 aa8.45□□□□□ -1.06
ZNF560-202ENST00000585974 ZDHHC3Q9NYG2 299 aa8.45□□□□□ -1.06
ZNF560-202ENST00000585974 SERTAD1Q9UHV2 236 aa8.45□□□□□ -1.06
ZNF560-202ENST00000585974 PALM3A6NDB9 673 aaPredicted RBP8.44□□□□□ -1.06
ZNF560-202ENST00000585974 STAU1O95793 577 aaKnown RBP8.44□□□□□ -1.06
ZNF560-202ENST00000585974 FIGNL1Q6PIW4 674 aa8.44□□□□□ -1.06
ZNF560-202ENST00000585974 NLRP8Q86W28 1048 aa8.44□□□□□ -1.06
ZNF560-202ENST00000585974 GPAMQ9HCL2 828 aa8.44□□□□□ -1.06
ZNF560-202ENST00000585974 ENAMQ9NRM1 1142 aa8.44□□□□□ -1.06
ZNF560-202ENST00000585974 SCHIP1Q9P0W5 487 aaPredicted RBP8.44□□□□□ -1.06
ZNF560-202ENST00000585974 MKRN1Q9UHC7 482 aaKnown RBP8.44□□□□□ -1.06
ZNF560-202ENST00000585974 IQSEC3Q9UPP2 1182 aaPredicted RBP8.44□□□□□ -1.06
ZNF560-202ENST00000585974 ZBTB7BO15156 539 aaPredicted RBP8.43□□□□□ -1.06
ZNF560-202ENST00000585974 TATP17735 454 aaPredicted RBP8.43□□□□□ -1.06
ZNF560-202ENST00000585974 MX2P20592 715 aa8.43□□□□□ -1.06
ZNF560-202ENST00000585974 MAP2K3P46734 347 aa8.43□□□□□ -1.06
ZNF560-202ENST00000585974 ZNF385CQ66K41 422 aaPredicted RBP8.43□□□□□ -1.06
ZNF560-202ENST00000585974 ZNF295-AS1Q8N0V1 137 aa8.43□□□□□ -1.06
ZNF560-202ENST00000585974 DEPDC4Q8N2C3 294 aa8.43□□□□□ -1.06
ZNF560-202ENST00000585974 CALR3Q96L12 384 aaKnown RBP8.43□□□□□ -1.06
ZNF560-202ENST00000585974 DNAAF2Q9NVR5 837 aaKnown RBP8.43□□□□□ -1.06
ZNF560-202ENST00000585974 ZNF358Q9NW07 568 aa8.43□□□□□ -1.06
ZNF560-202ENST00000585974 RBM19Q9Y4C8 960 aaKnown RBP8.43□□□□□ -1.06
ZNF560-202ENST00000585974 PLA2G4AP47712 749 aa8.42□□□□□ -1.06
ZNF560-202ENST00000585974 MAP3K10Q02779 954 aa8.42□□□□□ -1.06
ZNF560-202ENST00000585974 TEAD4Q15561 434 aa8.42□□□□□ -1.06
ZNF560-202ENST00000585974 CCDC102BQ68D86 513 aa8.42□□□□□ -1.06
ZNF560-202ENST00000585974 SVOPQ8N4V2 548 aa8.42□□□□□ -1.06
ZNF560-202ENST00000585974 OGFOD1Q8N543 542 aa8.42□□□□□ -1.06
ZNF560-202ENST00000585974 CABP1Q9NZU7 370 aa8.42□□□□□ -1.06
ZNF560-202ENST00000585974 ATXN7L1Q9ULK2 861 aaPredicted RBP8.42□□□□□ -1.06
ZNF560-202ENST00000585974 IGF1RP08069 1367 aa8.42□□□□□ -1.06
ZNF560-202ENST00000585974 RNF225M0QZC1 329 aaPredicted RBP8.41□□□□□ -1.06
ZNF560-202ENST00000585974 GPR25O00155 361 aa8.41□□□□□ -1.06
ZNF560-202ENST00000585974 ARHGEF15O94989 841 aa8.41□□□□□ -1.06
ZNF560-202ENST00000585974 SIX5Q8N196 739 aa8.41□□□□□ -1.06
ZNF560-202ENST00000585974 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.41□□□□□ -1.06
ZNF560-202ENST00000585974 AIDAQ96BJ3 306 aa8.41□□□□□ -1.06
ZNF560-202ENST00000585974 TFIP11Q9UBB9 837 aaKnown RBP8.41□□□□□ -1.06
ZNF560-202ENST00000585974 ADAMTS8Q9UP79 889 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms