RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 CEMIPQ8WUJ3 1361 aa18.31■□□□□ 0.52
PRKCSH-202ENST00000585540 LOC102724428A0A0B4J2F2 783 aa18.31■□□□□ 0.52
PRKCSH-202ENST00000585540 SIK1P57059 783 aa18.31■□□□□ 0.52
PRKCSH-202ENST00000585540 WDR43Q15061 677 aaKnown RBP eCLIP18.31■□□□□ 0.521e-7■■■□□ 17.1
PRKCSH-202ENST00000585540 RTF1Q92541 710 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-202ENST00000585540 ANO8Q9HCE9 1232 aaPredicted RBP18.31■□□□□ 0.52
PRKCSH-202ENST00000585540 LRRC4BQ9NT99 713 aa18.31■□□□□ 0.52
PRKCSH-202ENST00000585540 CASZ1Q86V15 1759 aa18.3■□□□□ 0.52
PRKCSH-202ENST00000585540 FLAD1Q8NFF5 587 aa18.3■□□□□ 0.52
PRKCSH-202ENST00000585540 AKT1S1Q96B36 256 aa18.3■□□□□ 0.52
PRKCSH-202ENST00000585540 ATG3Q9NT62 314 aa18.3■□□□□ 0.52
PRKCSH-202ENST00000585540 TEFQ10587 303 aa18.29■□□□□ 0.52
PRKCSH-202ENST00000585540 PLEKHF1Q96S99 279 aa18.29■□□□□ 0.52
PRKCSH-202ENST00000585540 SIPA1L3O60292 1781 aaPredicted RBP18.28■□□□□ 0.52
PRKCSH-202ENST00000585540 PSDA5PKW4 1024 aaPredicted RBP18.28■□□□□ 0.52
PRKCSH-202ENST00000585540 NFATC2IPQ8NCF5 419 aa18.28■□□□□ 0.52
PRKCSH-202ENST00000585540 SLC16A10Q8TF71 515 aa18.28■□□□□ 0.52
PRKCSH-202ENST00000585540 PHACTR3Q96KR7 559 aa18.28■□□□□ 0.52
PRKCSH-202ENST00000585540 ASAP1Q9ULH1 1129 aa18.28■□□□□ 0.52
PRKCSH-202ENST00000585540 C4BP0C0L5 1744 aa18.28■□□□□ 0.52
PRKCSH-202ENST00000585540 LMOD3Q0VAK6 560 aa18.27■□□□□ 0.52
PRKCSH-202ENST00000585540 NFE2L2Q16236 605 aa18.26■□□□□ 0.51
PRKCSH-202ENST00000585540 VSIG10Q8N0Z9 540 aa18.26■□□□□ 0.51
PRKCSH-202ENST00000585540 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
PRKCSH-202ENST00000585540 ATP6V1AP38606 617 aa18.25■□□□□ 0.51
PRKCSH-202ENST00000585540 TTC5Q8N0Z6 440 aa18.25■□□□□ 0.51
PRKCSH-202ENST00000585540 LGR6Q9HBX8 967 aa18.25■□□□□ 0.51
PRKCSH-202ENST00000585540 TFCP2L1Q9NZI6 479 aa18.25■□□□□ 0.51
PRKCSH-202ENST00000585540 COL5A3P25940 1745 aaPredicted RBP18.24■□□□□ 0.51
PRKCSH-202ENST00000585540 ZNF827Q17R98 1081 aa18.24■□□□□ 0.51
PRKCSH-202ENST00000585540 IL17REQ8NFR9 667 aa18.24■□□□□ 0.51
PRKCSH-202ENST00000585540 AK7Q96M32 723 aa18.24■□□□□ 0.51
PRKCSH-202ENST00000585540 CNTNAP4Q9C0A0 1308 aa18.23■□□□□ 0.51
PRKCSH-202ENST00000585540 DLG5Q8TDM6 1919 aa18.23■□□□□ 0.51
PRKCSH-202ENST00000585540 RC3H1Q5TC82 1133 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-202ENST00000585540 PNISRQ8TF01 805 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-202ENST00000585540 RUNDC1Q96C34 613 aa18.23■□□□□ 0.51
PRKCSH-202ENST00000585540 SPON1Q9HCB6 807 aa18.23■□□□□ 0.51
PRKCSH-202ENST00000585540 TUBGCP6Q96RT7 1819 aa18.23■□□□□ 0.51
PRKCSH-202ENST00000585540 SSFA2P28290 1259 aa18.22■□□□□ 0.51
PRKCSH-202ENST00000585540 RBM42Q9BTD8 480 aaKnown RBP18.22■□□□□ 0.51
PRKCSH-202ENST00000585540 MTFR1LQ9H019 292 aa18.22■□□□□ 0.51
PRKCSH-202ENST00000585540 KCPQ6ZWJ8 1503 aa18.22■□□□□ 0.51
PRKCSH-202ENST00000585540 UBR3Q6ZT12 1888 aa18.21■□□□□ 0.51
PRKCSH-202ENST00000585540 ADRA2BP18089 450 aa18.21■□□□□ 0.51
PRKCSH-202ENST00000585540 PNPLA7Q6ZV29 1317 aa18.21■□□□□ 0.51
PRKCSH-202ENST00000585540 TJP1Q07157 1748 aa18.2■□□□□ 0.5
PRKCSH-202ENST00000585540 CCDC184Q52MB2 194 aa18.2■□□□□ 0.5
PRKCSH-202ENST00000585540 ZNF790Q6PG37 636 aa18.2■□□□□ 0.5
PRKCSH-202ENST00000585540 TEX13AQ9BXU3 409 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-202ENST00000585540 COL24A1Q17RW2 1714 aa18.2■□□□□ 0.5
PRKCSH-202ENST00000585540 BABAM1Q9NWV8 329 aa18.19■□□□□ 0.5
PRKCSH-202ENST00000585540 BTBD11A6QL63 1104 aa18.18■□□□□ 0.5
PRKCSH-202ENST00000585540 ITPK1Q13572 414 aa18.18■□□□□ 0.5
PRKCSH-202ENST00000585540 LINC00116Q8NCU8 138 aa18.18■□□□□ 0.5
PRKCSH-202ENST00000585540 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
PRKCSH-202ENST00000585540 ADAMTS8Q9UP79 889 aa18.18■□□□□ 0.5
PRKCSH-202ENST00000585540 HEG1Q9ULI3 1381 aa18.17■□□□□ 0.5
PRKCSH-202ENST00000585540 PTCD1O75127 700 aaKnown RBP18.17■□□□□ 0.5
PRKCSH-202ENST00000585540 TMPOP42166 694 aaKnown RBP18.17■□□□□ 0.5
PRKCSH-202ENST00000585540 KCNQ4P56696 695 aa18.17■□□□□ 0.5
PRKCSH-202ENST00000585540 TAF7Q15545 349 aaPredicted RBP18.17■□□□□ 0.5
PRKCSH-202ENST00000585540 NCBP3Q53F19 620 aaKnown RBP18.16■□□□□ 0.5
PRKCSH-202ENST00000585540 MCM10Q7L590 875 aa18.16■□□□□ 0.5
PRKCSH-202ENST00000585540 SLC4A9Q96Q91 983 aa18.16■□□□□ 0.5
PRKCSH-202ENST00000585540 MRS2Q9HD23 443 aa18.16■□□□□ 0.5
PRKCSH-202ENST00000585540 RTCBQ9Y3I0 505 aaKnown RBP18.16■□□□□ 0.5
PRKCSH-202ENST00000585540 KDM3BQ7LBC6 1761 aa18.15■□□□□ 0.5
PRKCSH-202ENST00000585540 GNPATO15228 680 aa18.15■□□□□ 0.5
PRKCSH-202ENST00000585540 STARD3NLO95772 234 aa18.15■□□□□ 0.5
PRKCSH-202ENST00000585540 RIPK4P57078 832 aa18.15■□□□□ 0.5
PRKCSH-202ENST00000585540 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
PRKCSH-202ENST00000585540 RPS6KA4O75676 772 aa18.14■□□□□ 0.49
PRKCSH-202ENST00000585540 POLD1P28340 1107 aa18.14■□□□□ 0.49
PRKCSH-202ENST00000585540 SLC39A6Q13433 755 aa18.14■□□□□ 0.49
PRKCSH-202ENST00000585540 CALD1Q05682 793 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-202ENST00000585540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-202ENST00000585540 CRKLP46109 303 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-202ENST00000585540 COL23A1Q86Y22 540 aaPredicted RBP18.12■□□□□ 0.49
PRKCSH-202ENST00000585540 ZBTB7AO95365 584 aa18.11■□□□□ 0.49
PRKCSH-202ENST00000585540 CYP19A1P11511 503 aaPredicted RBP18.11■□□□□ 0.49
PRKCSH-202ENST00000585540 DCTN1Q14203 1278 aa18.11■□□□□ 0.49
PRKCSH-202ENST00000585540 TRAPPC3LQ5T215 181 aa18.11■□□□□ 0.49
PRKCSH-202ENST00000585540 DNAJC10Q8IXB1 793 aa18.11■□□□□ 0.49
PRKCSH-202ENST00000585540 ZNF496Q96IT1 587 aaPredicted RBP18.11■□□□□ 0.49
PRKCSH-202ENST00000585540 CCDC87Q9NVE4 849 aa18.11■□□□□ 0.49
PRKCSH-202ENST00000585540 PPP1R1BQ9UD71 204 aaPredicted RBP18.11■□□□□ 0.49
PRKCSH-202ENST00000585540 MYH14Q7Z406 1995 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-202ENST00000585540 LAMB4A4D0S4 1761 aa18.1■□□□□ 0.49
PRKCSH-202ENST00000585540 SNRPA1P09661 255 aaKnown RBP18.1■□□□□ 0.49
PRKCSH-202ENST00000585540 CCDC146Q8IYE0 955 aa18.1■□□□□ 0.49
PRKCSH-202ENST00000585540 NGEFQ8N5V2 710 aa18.1■□□□□ 0.49
PRKCSH-202ENST00000585540 SGIP1Q9BQI5 828 aa18.1■□□□□ 0.49
PRKCSH-202ENST00000585540 MSH5O43196 834 aa18.09■□□□□ 0.49
PRKCSH-202ENST00000585540 PTGER2P43116 358 aa18.09■□□□□ 0.49
PRKCSH-202ENST00000585540 SOS1Q07889 1333 aaPredicted RBP18.08■□□□□ 0.49
PRKCSH-202ENST00000585540 CCDC27Q2M243 656 aa18.08■□□□□ 0.48
PRKCSH-202ENST00000585540 PDGFDQ9GZP0 370 aaPredicted RBP18.08■□□□□ 0.48
PRKCSH-202ENST00000585540 C4AP0C0L4 1744 aa18.08■□□□□ 0.48
PRKCSH-202ENST00000585540 A0A087WZG4 1122 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 889.1 ms