RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 SMARCC1Q92922 1105 aaPredicted RBP19.11■□□□□ 0.65
SCAMP4-209ENST00000585335 BTAF1O14981 1849 aa19.11■□□□□ 0.65
SCAMP4-209ENST00000585335 DCTN1Q14203 1278 aa19.1■□□□□ 0.65
SCAMP4-209ENST00000585335 EP400Q96L91 3159 aa19.1■□□□□ 0.65
SCAMP4-209ENST00000585335 CCDC27Q2M243 656 aa19.09■□□□□ 0.65
SCAMP4-209ENST00000585335 TRIM35Q9UPQ4 493 aa19.09■□□□□ 0.65
SCAMP4-209ENST00000585335 PTF1AQ7RTS3 328 aa19.08■□□□□ 0.64
SCAMP4-209ENST00000585335 BTBD11A6QL63 1104 aa19.07■□□□□ 0.64
SCAMP4-209ENST00000585335 PLSCR1O15162 318 aa19.07■□□□□ 0.64
SCAMP4-209ENST00000585335 TAF7Q15545 349 aaPredicted RBP19.07■□□□□ 0.64
SCAMP4-209ENST00000585335 TTC5Q8N0Z6 440 aa19.07■□□□□ 0.64
SCAMP4-209ENST00000585335 THUMPD2Q9BTF0 503 aaKnown RBP19.07■□□□□ 0.64
SCAMP4-209ENST00000585335 PALLDQ8WX93 1383 aa19.06■□□□□ 0.64
SCAMP4-209ENST00000585335 HMGB2P26583 209 aaKnown RBP19.06■□□□□ 0.64
SCAMP4-209ENST00000585335 SALL2Q9Y467 1007 aaPredicted RBP19.06■□□□□ 0.64
SCAMP4-209ENST00000585335 RGPD3A6NKT7 1758 aaPredicted RBP19.05■□□□□ 0.64
SCAMP4-209ENST00000585335 SIPA1L3O60292 1781 aaPredicted RBP19.05■□□□□ 0.64
SCAMP4-209ENST00000585335 RGPD4Q7Z3J3 1758 aa19.05■□□□□ 0.64
SCAMP4-209ENST00000585335 SENP3-EIF4A1A0A087X0R7 540 aa19.04■□□□□ 0.64
SCAMP4-209ENST00000585335 WWC1Q8IX03 1113 aa19.04■□□□□ 0.64
SCAMP4-209ENST00000585335 ATG3Q9NT62 314 aa19.04■□□□□ 0.64
SCAMP4-209ENST00000585335 BABAM1Q9NWV8 329 aa19.04■□□□□ 0.64
SCAMP4-209ENST00000585335 ASAP1Q9ULH1 1129 aa19.04■□□□□ 0.64
SCAMP4-209ENST00000585335 GNAI1P63096 354 aa19.02■□□□□ 0.64
SCAMP4-209ENST00000585335 EN1Q05925 392 aaPredicted RBP19.02■□□□□ 0.64
SCAMP4-209ENST00000585335 SLC27A3Q5K4L6 730 aa19.02■□□□□ 0.64
SCAMP4-209ENST00000585335 DEFB132Q7Z7B7 95 aa19.02■□□□□ 0.64
SCAMP4-209ENST00000585335 TSPYL4Q9UJ04 414 aa19.02■□□□□ 0.64
SCAMP4-209ENST00000585335 LAS1LQ9Y4W2 734 aaKnown RBP19.02■□□□□ 0.64
SCAMP4-209ENST00000585335 PAPPAQ13219 1627 aa19.01■□□□□ 0.63
SCAMP4-209ENST00000585335 HNRNPUQ00839 825 aaKnown RBP eCLIP19.01■□□□□ 0.63
SCAMP4-209ENST00000585335 SLC39A6Q13433 755 aa19.01■□□□□ 0.63
SCAMP4-209ENST00000585335 ZNF790Q6PG37 636 aa19.01■□□□□ 0.63
SCAMP4-209ENST00000585335 WDR63Q8IWG1 891 aa19.01■□□□□ 0.63
SCAMP4-209ENST00000585335 RBM42Q9BTD8 480 aaKnown RBP19.01■□□□□ 0.63
SCAMP4-209ENST00000585335 IFT57Q9NWB7 429 aa19.01■□□□□ 0.63
SCAMP4-209ENST00000585335 IL16Q14005 1332 aa19■□□□□ 0.63
SCAMP4-209ENST00000585335 PTCD1O75127 700 aaKnown RBP19■□□□□ 0.63
SCAMP4-209ENST00000585335 TXNRD1Q16881 649 aa19■□□□□ 0.63
SCAMP4-209ENST00000585335 CFAP44Q96MT7 982 aa19■□□□□ 0.63
SCAMP4-209ENST00000585335 CAMKK2Q96RR4 588 aa19■□□□□ 0.63
SCAMP4-209ENST00000585335 CCNL1Q9UK58 526 aaPredicted RBP19■□□□□ 0.63
SCAMP4-209ENST00000585335 LOC102724428A0A0B4J2F2 783 aa18.99■□□□□ 0.63
SCAMP4-209ENST00000585335 SIK1P57059 783 aa18.99■□□□□ 0.63
SCAMP4-209ENST00000585335 FMNL2Q96PY5 1086 aa18.99■□□□□ 0.63
SCAMP4-209ENST00000585335 LY75O60449 1722 aa18.99■□□□□ 0.63
SCAMP4-209ENST00000585335 EZH2Q15910 746 aaKnown RBP18.98■□□□□ 0.63
SCAMP4-209ENST00000585335 MIS18AQ9NYP9 233 aa18.98■□□□□ 0.63
SCAMP4-209ENST00000585335 CHL1O00533 1208 aa18.97■□□□□ 0.63
SCAMP4-209ENST00000585335 VSIG10Q8N0Z9 540 aa18.97■□□□□ 0.63
SCAMP4-209ENST00000585335 KDM3BQ7LBC6 1761 aa18.96■□□□□ 0.63
SCAMP4-209ENST00000585335 KCPQ6ZWJ8 1503 aa18.96■□□□□ 0.63
SCAMP4-209ENST00000585335 ATP6V1AP38606 617 aa18.96■□□□□ 0.63
SCAMP4-209ENST00000585335 MYH16Q9H6N6 1097 aa18.96■□□□□ 0.63
SCAMP4-209ENST00000585335 UBR2Q8IWV8 1755 aa18.96■□□□□ 0.63
SCAMP4-209ENST00000585335 ZNF831Q5JPB2 1677 aa18.95■□□□□ 0.62
SCAMP4-209ENST00000585335 ZNF496Q96IT1 587 aaPredicted RBP18.95■□□□□ 0.62
SCAMP4-209ENST00000585335 TEX13AQ9BXU3 409 aaPredicted RBP18.95■□□□□ 0.62
SCAMP4-209ENST00000585335 RREB1Q92766 1687 aa18.95■□□□□ 0.62
SCAMP4-209ENST00000585335 HEG1Q9ULI3 1381 aa18.94■□□□□ 0.62
SCAMP4-209ENST00000585335 ZNF853P0CG23 659 aa18.94■□□□□ 0.62
SCAMP4-209ENST00000585335 GOLGA2Q08379 1002 aa18.94■□□□□ 0.62
SCAMP4-209ENST00000585335 ZNF521Q96K83 1311 aa18.94■□□□□ 0.62
SCAMP4-209ENST00000585335 KCNQ3O43525 872 aa18.93■□□□□ 0.62
SCAMP4-209ENST00000585335 SNRPA1P09661 255 aaKnown RBP18.93■□□□□ 0.62
SCAMP4-209ENST00000585335 EIF4A1P60842 406 aaKnown RBP18.93■□□□□ 0.62
SCAMP4-209ENST00000585335 NBPF14Q5TI25 921 aa18.93■□□□□ 0.62
SCAMP4-209ENST00000585335 PROM2Q8N271 834 aa18.93■□□□□ 0.62
SCAMP4-209ENST00000585335 MBIPQ9NS73 344 aa18.93■□□□□ 0.62
SCAMP4-209ENST00000585335 E9PSI1 815 aa18.91■□□□□ 0.62
SCAMP4-209ENST00000585335 STARD3NLO95772 234 aa18.91■□□□□ 0.62
SCAMP4-209ENST00000585335 KCNQ4P56696 695 aa18.91■□□□□ 0.62
SCAMP4-209ENST00000585335 LRRC4BQ9NT99 713 aa18.91■□□□□ 0.62
SCAMP4-209ENST00000585335 CICQ96RK0 1608 aaPredicted RBP18.91■□□□□ 0.62
SCAMP4-209ENST00000585335 ZBED9Q6R2W3 1325 aa18.91■□□□□ 0.62
SCAMP4-209ENST00000585335 NUP188Q5SRE5 1749 aa18.91■□□□□ 0.62
SCAMP4-209ENST00000585335 C5P01031 1676 aa18.9■□□□□ 0.62
SCAMP4-209ENST00000585335 SLC4A9Q96Q91 983 aa18.9■□□□□ 0.62
SCAMP4-209ENST00000585335 STK32BQ9NY57 414 aa18.9■□□□□ 0.62
SCAMP4-209ENST00000585335 ITPK1Q13572 414 aa18.89■□□□□ 0.61
SCAMP4-209ENST00000585335 DNAJC10Q8IXB1 793 aa18.89■□□□□ 0.61
SCAMP4-209ENST00000585335 TSR2Q969E8 191 aaKnown RBP18.89■□□□□ 0.61
SCAMP4-209ENST00000585335 AK7Q96M32 723 aa18.89■□□□□ 0.61
SCAMP4-209ENST00000585335 CHMP4AQ9BY43 222 aa18.89■□□□□ 0.61
SCAMP4-209ENST00000585335 TJP1Q07157 1748 aa18.88■□□□□ 0.61
SCAMP4-209ENST00000585335 LINC00116Q8NCU8 138 aa18.88■□□□□ 0.61
SCAMP4-209ENST00000585335 FANCIQ9NVI1 1328 aa18.88■□□□□ 0.61
SCAMP4-209ENST00000585335 TAF1LQ8IZX4 1826 aa18.88■□□□□ 0.61
SCAMP4-209ENST00000585335 GIGYF1O75420 1035 aaPredicted RBP18.87■□□□□ 0.61
SCAMP4-209ENST00000585335 HOXB7P09629 217 aa18.87■□□□□ 0.61
SCAMP4-209ENST00000585335 SOS1Q07889 1333 aaPredicted RBP18.87■□□□□ 0.61
SCAMP4-209ENST00000585335 CNTNAP4Q9C0A0 1308 aa18.87■□□□□ 0.61
SCAMP4-209ENST00000585335 C4BP0C0L5 1744 aa18.86■□□□□ 0.61
SCAMP4-209ENST00000585335 RC3H1Q5TC82 1133 aaKnown RBP18.86■□□□□ 0.61
SCAMP4-209ENST00000585335 COL5A3P25940 1745 aaPredicted RBP18.86■□□□□ 0.61
SCAMP4-209ENST00000585335 CYP19A1P11511 503 aaPredicted RBP18.85■□□□□ 0.61
SCAMP4-209ENST00000585335 CRKLP46109 303 aaKnown RBP18.85■□□□□ 0.61
SCAMP4-209ENST00000585335 SLFN5Q08AF3 891 aa18.85■□□□□ 0.61
SCAMP4-209ENST00000585335 CCDC87Q9NVE4 849 aa18.85■□□□□ 0.61
SCAMP4-209ENST00000585335 TFCP2L1Q9NZI6 479 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms