RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 SLC52A2Q9HAB3 445 aa18.7■□□□□ 0.58
MKS1-213ENST00000585134 ASAP1Q9ULH1 1129 aa18.7■□□□□ 0.58
MKS1-213ENST00000585134 TEFQ10587 303 aa18.69■□□□□ 0.58
MKS1-213ENST00000585134 PROM2Q8N271 834 aa18.69■□□□□ 0.58
MKS1-213ENST00000585134 IL17REQ8NFR9 667 aa18.69■□□□□ 0.58
MKS1-213ENST00000585134 SMARCC1Q92922 1105 aaPredicted RBP18.69■□□□□ 0.58
MKS1-213ENST00000585134 NEUROD2Q15784 382 aa18.68■□□□□ 0.58
MKS1-213ENST00000585134 ATG3Q9NT62 314 aa18.68■□□□□ 0.58
MKS1-213ENST00000585134 CCNL1Q9UK58 526 aaPredicted RBP18.68■□□□□ 0.58
MKS1-213ENST00000585134 PAPPAQ13219 1627 aa18.67■□□□□ 0.58
MKS1-213ENST00000585134 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
MKS1-213ENST00000585134 PNISRQ8TF01 805 aaKnown RBP18.67■□□□□ 0.58
MKS1-213ENST00000585134 ANO8Q9HCE9 1232 aaPredicted RBP18.67■□□□□ 0.58
MKS1-213ENST00000585134 SIPA1L3O60292 1781 aaPredicted RBP18.66■□□□□ 0.58
MKS1-213ENST00000585134 PSDA5PKW4 1024 aaPredicted RBP18.66■□□□□ 0.58
MKS1-213ENST00000585134 TMPOP42166 694 aaKnown RBP18.66■□□□□ 0.58
MKS1-213ENST00000585134 FAM9BQ8IZU0 186 aa18.66■□□□□ 0.58
MKS1-213ENST00000585134 RBM42Q9BTD8 480 aaKnown RBP18.66■□□□□ 0.58
MKS1-213ENST00000585134 THUMPD2Q9BTF0 503 aaKnown RBP18.66■□□□□ 0.58
MKS1-213ENST00000585134 LRRC4BQ9NT99 713 aa18.66■□□□□ 0.58
MKS1-213ENST00000585134 CEMIPQ8WUJ3 1361 aa18.66■□□□□ 0.58
MKS1-213ENST00000585134 RIPK4P57078 832 aa18.65■□□□□ 0.58
MKS1-213ENST00000585134 SLC39A6Q13433 755 aa18.65■□□□□ 0.58
MKS1-213ENST00000585134 SLC27A3Q5K4L6 730 aa18.65■□□□□ 0.58
MKS1-213ENST00000585134 C5P01031 1676 aa18.64■□□□□ 0.57
MKS1-213ENST00000585134 LOC102724428A0A0B4J2F2 783 aa18.64■□□□□ 0.57
MKS1-213ENST00000585134 SIK1P57059 783 aa18.64■□□□□ 0.57
MKS1-213ENST00000585134 NBPF14Q5TI25 921 aa18.64■□□□□ 0.57
MKS1-213ENST00000585134 HTATSF1O43719 755 aaKnown RBP18.63■□□□□ 0.57
MKS1-213ENST00000585134 PTCD1O75127 700 aaKnown RBP18.63■□□□□ 0.57
MKS1-213ENST00000585134 R3HDM1Q15032 1099 aaKnown RBP18.63■□□□□ 0.57
MKS1-213ENST00000585134 APAF1O14727 1248 aa18.62■□□□□ 0.57
MKS1-213ENST00000585134 LMOD3Q0VAK6 560 aa18.62■□□□□ 0.57
MKS1-213ENST00000585134 MIER1Q8N108 512 aa18.62■□□□□ 0.57
MKS1-213ENST00000585134 STK32BQ9NY57 414 aa18.62■□□□□ 0.57
MKS1-213ENST00000585134 KCPQ6ZWJ8 1503 aa18.62■□□□□ 0.57
MKS1-213ENST00000585134 ZNF827Q17R98 1081 aa18.61■□□□□ 0.57
MKS1-213ENST00000585134 TTC5Q8N0Z6 440 aa18.61■□□□□ 0.57
MKS1-213ENST00000585134 TAF1LQ8IZX4 1826 aa18.6■□□□□ 0.57
MKS1-213ENST00000585134 BTBD11A6QL63 1104 aa18.6■□□□□ 0.57
MKS1-213ENST00000585134 ATP6V1AP38606 617 aa18.6■□□□□ 0.57
MKS1-213ENST00000585134 TJP1Q07157 1748 aa18.6■□□□□ 0.57
MKS1-213ENST00000585134 CCER2I3L3R5 266 aa18.59■□□□□ 0.57
MKS1-213ENST00000585134 ITPK1Q13572 414 aa18.59■□□□□ 0.57
MKS1-213ENST00000585134 UBR2Q8IWV8 1755 aa18.59■□□□□ 0.57
MKS1-213ENST00000585134 C4BP0C0L5 1744 aa18.59■□□□□ 0.57
MKS1-213ENST00000585134 TUBGCP6Q96RT7 1819 aa18.58■□□□□ 0.57
MKS1-213ENST00000585134 LINC00116Q8NCU8 138 aa18.58■□□□□ 0.56
MKS1-213ENST00000585134 SLC4A9Q96Q91 983 aa18.58■□□□□ 0.56
MKS1-213ENST00000585134 KCNQ3O43525 872 aa18.57■□□□□ 0.56
MKS1-213ENST00000585134 SLC15A2Q16348 729 aa18.57■□□□□ 0.56
MKS1-213ENST00000585134 MIS18AQ9NYP9 233 aa18.57■□□□□ 0.56
MKS1-213ENST00000585134 TRIM35Q9UPQ4 493 aa18.57■□□□□ 0.56
MKS1-213ENST00000585134 KDM3BQ7LBC6 1761 aa18.56■□□□□ 0.56
MKS1-213ENST00000585134 ZNF790Q6PG37 636 aa18.56■□□□□ 0.56
MKS1-213ENST00000585134 AK7Q96M32 723 aa18.56■□□□□ 0.56
MKS1-213ENST00000585134 SALL2Q9Y467 1007 aaPredicted RBP18.56■□□□□ 0.56
MKS1-213ENST00000585134 ZNF831Q5JPB2 1677 aa18.56■□□□□ 0.56
MKS1-213ENST00000585134 COL5A3P25940 1745 aaPredicted RBP18.55■□□□□ 0.56
MKS1-213ENST00000585134 TAF7Q15545 349 aaPredicted RBP18.55■□□□□ 0.56
MKS1-213ENST00000585134 AKT1S1Q96B36 256 aa18.55■□□□□ 0.56
MKS1-213ENST00000585134 LAS1LQ9Y4W2 734 aaKnown RBP18.55■□□□□ 0.56
MKS1-213ENST00000585134 CICQ96RK0 1608 aaPredicted RBP18.54■□□□□ 0.56
MKS1-213ENST00000585134 DNAJC10Q8IXB1 793 aa18.54■□□□□ 0.56
MKS1-213ENST00000585134 ZNF496Q96IT1 587 aaPredicted RBP18.54■□□□□ 0.56
MKS1-213ENST00000585134 TFCP2L1Q9NZI6 479 aa18.54■□□□□ 0.56
MKS1-213ENST00000585134 PHF14O94880 888 aa18.53■□□□□ 0.56
MKS1-213ENST00000585134 FMNL2Q96PY5 1086 aa18.53■□□□□ 0.56
MKS1-213ENST00000585134 TSPYL4Q9UJ04 414 aa18.53■□□□□ 0.56
MKS1-213ENST00000585134 HEG1Q9ULI3 1381 aa18.53■□□□□ 0.56
MKS1-213ENST00000585134 GNPATO15228 680 aa18.52■□□□□ 0.56
MKS1-213ENST00000585134 SMIM5Q71RC9 77 aa18.52■□□□□ 0.56
MKS1-213ENST00000585134 CASZ1Q86V15 1759 aa18.52■□□□□ 0.55
MKS1-213ENST00000585134 QSER1Q2KHR3 1735 aa18.52■□□□□ 0.55
MKS1-213ENST00000585134 MSH5O43196 834 aa18.51■□□□□ 0.55
MKS1-213ENST00000585134 PDGFDQ9GZP0 370 aaPredicted RBP18.51■□□□□ 0.55
MKS1-213ENST00000585134 CRKLP46109 303 aaKnown RBP18.5■□□□□ 0.55
MKS1-213ENST00000585134 UBR3Q6ZT12 1888 aa18.5■□□□□ 0.55
MKS1-213ENST00000585134 PNPLA7Q6ZV29 1317 aa18.49■□□□□ 0.55
MKS1-213ENST00000585134 CNTNAP4Q9C0A0 1308 aa18.49■□□□□ 0.55
MKS1-213ENST00000585134 AMIGO3Q86WK7 504 aa18.49■□□□□ 0.55
MKS1-213ENST00000585134 PRAMEF22A3QJZ6 481 aa18.48■□□□□ 0.55
MKS1-213ENST00000585134 HMGB2P26583 209 aaKnown RBP18.48■□□□□ 0.55
MKS1-213ENST00000585134 LAMB4A4D0S4 1761 aa18.47■□□□□ 0.55
MKS1-213ENST00000585134 CYP19A1P11511 503 aaPredicted RBP18.47■□□□□ 0.55
MKS1-213ENST00000585134 CALD1Q05682 793 aaKnown RBP18.47■□□□□ 0.55
MKS1-213ENST00000585134 VSIG10Q8N0Z9 540 aa18.47■□□□□ 0.55
MKS1-213ENST00000585134 MYH14Q7Z406 1995 aaKnown RBP18.46■□□□□ 0.55
MKS1-213ENST00000585134 ZBTB7AO95365 584 aa18.46■□□□□ 0.55
MKS1-213ENST00000585134 CCDC87Q9NVE4 849 aa18.46■□□□□ 0.55
MKS1-213ENST00000585134 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.45■□□□□ 0.54
MKS1-213ENST00000585134 STARD3NLO95772 234 aa18.45■□□□□ 0.54
MKS1-213ENST00000585134 SNRPA1P09661 255 aaKnown RBP18.45■□□□□ 0.54
MKS1-213ENST00000585134 EIF4A1P60842 406 aaKnown RBP18.45■□□□□ 0.54
MKS1-213ENST00000585134 COL23A1Q86Y22 540 aaPredicted RBP18.45■□□□□ 0.54
MKS1-213ENST00000585134 WWC1Q8IX03 1113 aa18.45■□□□□ 0.54
MKS1-213ENST00000585134 ZBTB1Q9Y2K1 713 aa18.45■□□□□ 0.54
MKS1-213ENST00000585134 RTCBQ9Y3I0 505 aaKnown RBP18.45■□□□□ 0.54
MKS1-213ENST00000585134 CCDC27Q2M243 656 aa18.44■□□□□ 0.54
MKS1-213ENST00000585134 RC3H1Q5TC82 1133 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms