RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 RGPD2P0DJD1 1756 aa19.55■□□□□ 0.72
TVP23C-210ENST00000584811 NPHP4O75161 1426 aaPredicted RBP19.55■□□□□ 0.72
TVP23C-210ENST00000584811 GNAI2P04899 355 aa19.54■□□□□ 0.72
TVP23C-210ENST00000584811 ZC3H6P61129 1189 aaKnown RBP19.54■□□□□ 0.72
TVP23C-210ENST00000584811 ZNF530Q6P9A1 599 aaPredicted RBP19.54■□□□□ 0.72
TVP23C-210ENST00000584811 PRAMEF22A3QJZ6 481 aa19.54■□□□□ 0.72
TVP23C-210ENST00000584811 PROSER2Q86WR7 435 aaPredicted RBP19.54■□□□□ 0.72
TVP23C-210ENST00000584811 BRPF3Q9ULD4 1205 aa19.54■□□□□ 0.72
TVP23C-210ENST00000584811 CHPF2Q9P2E5 772 aa19.53■□□□□ 0.72
TVP23C-210ENST00000584811 LRRC37A3O60309 1634 aa19.53■□□□□ 0.72
TVP23C-210ENST00000584811 USP44Q9H0E7 712 aa19.53■□□□□ 0.72
TVP23C-210ENST00000584811 ARXQ96QS3 562 aa19.53■□□□□ 0.72
TVP23C-210ENST00000584811 EIF4A1P60842 406 aaKnown RBP19.52■□□□□ 0.72
TVP23C-210ENST00000584811 ARHGEF25Q86VW2 580 aa19.52■□□□□ 0.72
TVP23C-210ENST00000584811 PXDNQ92626 1479 aa19.52■□□□□ 0.71
TVP23C-210ENST00000584811 ANKRD24Q8TF21 1146 aa19.51■□□□□ 0.71
TVP23C-210ENST00000584811 CEMIPQ8WUJ3 1361 aa19.51■□□□□ 0.71
TVP23C-210ENST00000584811 KRT28Q7Z3Y7 464 aa19.5■□□□□ 0.71
TVP23C-210ENST00000584811 KCNH5Q8NCM2 988 aa19.5■□□□□ 0.71
TVP23C-210ENST00000584811 RTN4Q9NQC3 1192 aaKnown RBP19.5■□□□□ 0.71
TVP23C-210ENST00000584811 HSP90AB1P08238 724 aaKnown RBP19.5■□□□□ 0.71
TVP23C-210ENST00000584811 GZF1Q9H116 711 aaPredicted RBP19.5■□□□□ 0.71
TVP23C-210ENST00000584811 BTBD11A6QL63 1104 aa19.49■□□□□ 0.71
TVP23C-210ENST00000584811 HMMRO75330 724 aa19.49■□□□□ 0.71
TVP23C-210ENST00000584811 PDE1AP54750 535 aa19.49■□□□□ 0.71
TVP23C-210ENST00000584811 CABLES1Q8TDN4 633 aa19.49■□□□□ 0.71
TVP23C-210ENST00000584811 IL1RAPL2Q9NP60 686 aa19.49■□□□□ 0.71
TVP23C-210ENST00000584811 NBPF7P0C2Y1 421 aaPredicted RBP19.49■□□□□ 0.71
TVP23C-210ENST00000584811 TEFQ10587 303 aa19.49■□□□□ 0.71
TVP23C-210ENST00000584811 CHMP5Q9NZZ3 219 aa19.49■□□□□ 0.71
TVP23C-210ENST00000584811 FAM208AQ9UK61 1670 aaKnown RBP19.49■□□□□ 0.71
TVP23C-210ENST00000584811 PROSER3Q2NL68 480 aa19.48■□□□□ 0.71
TVP23C-210ENST00000584811 ADAMTSL3P82987 1691 aa19.48■□□□□ 0.71
TVP23C-210ENST00000584811 PI4KAP2A4QPH2 592 aa19.48■□□□□ 0.71
TVP23C-210ENST00000584811 PI4KAP1Q8N8J0 262 aa19.48■□□□□ 0.71
TVP23C-210ENST00000584811 SNX21Q969T3 373 aa19.47■□□□□ 0.71
TVP23C-210ENST00000584811 USP26Q9BXU7 913 aa19.47■□□□□ 0.71
TVP23C-210ENST00000584811 ZNF142P52746 1687 aaPredicted RBP19.47■□□□□ 0.71
TVP23C-210ENST00000584811 USP54Q70EL1 1684 aa19.47■□□□□ 0.71
TVP23C-210ENST00000584811 MCM4P33991 863 aa19.47■□□□□ 0.71
TVP23C-210ENST00000584811 DDIT3P35638 169 aa19.47■□□□□ 0.71
TVP23C-210ENST00000584811 UBTFL1P0CB47 393 aaPredicted RBP19.46■□□□□ 0.71
TVP23C-210ENST00000584811 ATP8B2P98198 1209 aa19.46■□□□□ 0.71
TVP23C-210ENST00000584811 GNAI3P08754 354 aa19.45■□□□□ 0.7
TVP23C-210ENST00000584811 AKAP4Q5JQC9 854 aa19.45■□□□□ 0.7
TVP23C-210ENST00000584811 UNC5CLQ8IV45 518 aa19.45■□□□□ 0.7
TVP23C-210ENST00000584811 RNMTO43148 476 aaKnown RBP19.44■□□□□ 0.7
TVP23C-210ENST00000584811 HSP90AA1P07900 732 aaKnown RBP19.44■□□□□ 0.7
TVP23C-210ENST00000584811 PLEKHO1Q53GL0 409 aaPredicted RBP19.44■□□□□ 0.7
TVP23C-210ENST00000584811 LRRCC1Q9C099 1032 aa19.44■□□□□ 0.7
TVP23C-210ENST00000584811 NCOA3Q9Y6Q9 1424 aa19.44■□□□□ 0.7
TVP23C-210ENST00000584811 PPP1R42Q7Z4L9 355 aa19.44■□□□□ 0.7
TVP23C-210ENST00000584811 NUTM1Q86Y26 1132 aa19.44■□□□□ 0.7
TVP23C-210ENST00000584811 MAP4K4O95819 1239 aaPredicted RBP19.43■□□□□ 0.7
TVP23C-210ENST00000584811 K7ELQ4 463 aaPredicted RBP19.43■□□□□ 0.7
TVP23C-210ENST00000584811 SLC39A6Q13433 755 aa19.43■□□□□ 0.7
TVP23C-210ENST00000584811 C1orf141Q5JVX7 400 aa19.43■□□□□ 0.7
TVP23C-210ENST00000584811 SRCIN1Q9C0H9 1055 aa19.42■□□□□ 0.7
TVP23C-210ENST00000584811 SALL3Q9BXA9 1300 aa19.42■□□□□ 0.7
TVP23C-210ENST00000584811 CHRNA2Q15822 529 aa19.42■□□□□ 0.7
TVP23C-210ENST00000584811 TNPO1Q92973 898 aaKnown RBP19.42■□□□□ 0.7
TVP23C-210ENST00000584811 RILPL2Q969X0 211 aa19.42■□□□□ 0.7
TVP23C-210ENST00000584811 MX1P20591 662 aa19.41■□□□□ 0.7
TVP23C-210ENST00000584811 C1orf167Q5SNV9 1468 aa19.41■□□□□ 0.7
TVP23C-210ENST00000584811 HSPA2P54652 639 aa19.41■□□□□ 0.7
TVP23C-210ENST00000584811 BEND3Q5T5X7 828 aa19.41■□□□□ 0.7
TVP23C-210ENST00000584811 C19orf44Q9H6X5 657 aa19.41■□□□□ 0.7
TVP23C-210ENST00000584811 BABAM1Q9NWV8 329 aa19.41■□□□□ 0.7
TVP23C-210ENST00000584811 IBTKQ9P2D0 1353 aaPredicted RBP19.41■□□□□ 0.7
TVP23C-210ENST00000584811 IL25Q9H293 177 aa19.41■□□□□ 0.7
TVP23C-210ENST00000584811 TRIM6-TRIM34B2RNG4 842 aa19.4■□□□□ 0.7
TVP23C-210ENST00000584811 SURF6O75683 361 aaKnown RBP19.4■□□□□ 0.7
TVP23C-210ENST00000584811 DNAAF4Q8WXU2 420 aa19.4■□□□□ 0.7
TVP23C-210ENST00000584811 NLRP2Q9NX02 1062 aa19.4■□□□□ 0.7
TVP23C-210ENST00000584811 ADCY9O60503 1353 aa19.4■□□□□ 0.7
TVP23C-210ENST00000584811 SRGAP3O43295 1099 aa19.4■□□□□ 0.7
TVP23C-210ENST00000584811 CWF19L2Q2TBE0 894 aaKnown RBP19.4■□□□□ 0.7
TVP23C-210ENST00000584811 SOS1Q07889 1333 aaPredicted RBP19.4■□□□□ 0.7
TVP23C-210ENST00000584811 PIP4K2AP48426 406 aaPredicted RBP19.39■□□□□ 0.69
TVP23C-210ENST00000584811 AIMP1Q12904 312 aaKnown RBP19.39■□□□□ 0.69
TVP23C-210ENST00000584811 OSBPL3Q9H4L5 887 aa19.39■□□□□ 0.69
TVP23C-210ENST00000584811 ERBB3P21860 1342 aa19.39■□□□□ 0.69
TVP23C-210ENST00000584811 GIGYF1O75420 1035 aaPredicted RBP19.38■□□□□ 0.69
TVP23C-210ENST00000584811 MED1Q15648 1581 aaPredicted RBP19.38■□□□□ 0.69
TVP23C-210ENST00000584811 TMEM94Q12767 1356 aa19.38■□□□□ 0.69
TVP23C-210ENST00000584811 SSFA2P28290 1259 aa19.38■□□□□ 0.69
TVP23C-210ENST00000584811 MAP3K2Q9Y2U5 619 aa19.38■□□□□ 0.69
TVP23C-210ENST00000584811 PKP1Q13835 747 aa19.37■□□□□ 0.69
TVP23C-210ENST00000584811 AMOTQ4VCS5 1084 aa19.37■□□□□ 0.69
TVP23C-210ENST00000584811 SSH3Q8TE77 659 aa19.37■□□□□ 0.69
TVP23C-210ENST00000584811 RGPD5Q99666 1765 aa19.37■□□□□ 0.69
TVP23C-210ENST00000584811 TRAK2O60296 914 aa19.36■□□□□ 0.69
TVP23C-210ENST00000584811 SLIT3O75094 1523 aa19.36■□□□□ 0.69
TVP23C-210ENST00000584811 ERC2O15083 957 aa19.36■□□□□ 0.69
TVP23C-210ENST00000584811 PALD1Q9ULE6 856 aa19.36■□□□□ 0.69
TVP23C-210ENST00000584811 ATF3P18847 181 aa19.35■□□□□ 0.69
TVP23C-210ENST00000584811 CASC1Q6TDU7 716 aa19.35■□□□□ 0.69
TVP23C-210ENST00000584811 PA2G4Q9UQ80 394 aaKnown RBP19.35■□□□□ 0.69
TVP23C-210ENST00000584811 ZGPATQ8N5A5 531 aaKnown RBP19.35■□□□□ 0.69
TVP23C-210ENST00000584811 RAB3GAP1Q15042 981 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms