RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 SIK1P57059 783 aa33.23■■■□□ 2.91
TTC39C-209ENST00000584250 SLC4A9Q96Q91 983 aa33.23■■■□□ 2.91
TTC39C-209ENST00000584250 PRKRIP1Q9H875 184 aaPredicted RBP33.23■■■□□ 2.91
TTC39C-209ENST00000584250 FCHSD2O94868 740 aa33.22■■■□□ 2.91
TTC39C-209ENST00000584250 ZBTB7AO95365 584 aa33.21■■■□□ 2.91
TTC39C-209ENST00000584250 ITPK1Q13572 414 aa33.21■■■□□ 2.91
TTC39C-209ENST00000584250 GAS2L2Q8NHY3 880 aa33.2■■■□□ 2.91
TTC39C-209ENST00000584250 SLC52A2Q9HAB3 445 aa33.2■■■□□ 2.91
TTC39C-209ENST00000584250 PNPLA7Q6ZV29 1317 aa33.2■■■□□ 2.91
TTC39C-209ENST00000584250 MAP3K5Q99683 1374 aa33.2■■■□□ 2.9
TTC39C-209ENST00000584250 MRC1P22897 1456 aa33.19■■■□□ 2.9
TTC39C-209ENST00000584250 IL17REQ8NFR9 667 aa33.19■■■□□ 2.9
TTC39C-209ENST00000584250 LINC00116Q8NCU8 138 aa33.18■■■□□ 2.9
TTC39C-209ENST00000584250 TFCP2L1Q9NZI6 479 aa33.18■■■□□ 2.9
TTC39C-209ENST00000584250 SMIM5Q71RC9 77 aa33.17■■■□□ 2.9
TTC39C-209ENST00000584250 AMIGO3Q86WK7 504 aa33.17■■■□□ 2.9
TTC39C-209ENST00000584250 RBM42Q9BTD8 480 aaKnown RBP33.17■■■□□ 2.9
TTC39C-209ENST00000584250 C4BP0C0L5 1744 aa33.16■■■□□ 2.9
TTC39C-209ENST00000584250 QSER1Q2KHR3 1735 aa33.16■■■□□ 2.9
TTC39C-209ENST00000584250 GNAT3A8MTJ3 354 aa33.16■■■□□ 2.9
TTC39C-209ENST00000584250 ATP6V1AP38606 617 aa33.16■■■□□ 2.9
TTC39C-209ENST00000584250 ATF5Q9Y2D1 282 aaPredicted RBP33.16■■■□□ 2.9
TTC39C-209ENST00000584250 PTCD1O75127 700 aaKnown RBP33.14■■■□□ 2.9
TTC39C-209ENST00000584250 SLC39A6Q13433 755 aa33.14■■■□□ 2.9
TTC39C-209ENST00000584250 SPON1Q9HCB6 807 aa33.14■■■□□ 2.9
TTC39C-209ENST00000584250 PLEKHF1Q96S99 279 aa33.13■■■□□ 2.89
TTC39C-209ENST00000584250 COL23A1Q86Y22 540 aaPredicted RBP33.1■■■□□ 2.89
TTC39C-209ENST00000584250 PTGER2P43116 358 aa33.09■■■□□ 2.89
TTC39C-209ENST00000584250 UBR3Q6ZT12 1888 aa33.08■■■□□ 2.89
TTC39C-209ENST00000584250 ZNF831Q5JPB2 1677 aa33.07■■■□□ 2.89
TTC39C-209ENST00000584250 SIPA1L3O60292 1781 aaPredicted RBP33.07■■■□□ 2.88
TTC39C-209ENST00000584250 DCTN1Q14203 1278 aa33.07■■■□□ 2.88
TTC39C-209ENST00000584250 MTFR1LQ9H019 292 aa33.07■■■□□ 2.88
TTC39C-209ENST00000584250 CEMIPQ8WUJ3 1361 aa33.07■■■□□ 2.88
TTC39C-209ENST00000584250 MCM10Q7L590 875 aa33.06■■■□□ 2.88
TTC39C-209ENST00000584250 AK7Q96M32 723 aa33.06■■■□□ 2.88
TTC39C-209ENST00000584250 COL5A3P25940 1745 aaPredicted RBP33.05■■■□□ 2.88
TTC39C-209ENST00000584250 DLG5Q8TDM6 1919 aa33.05■■■□□ 2.88
TTC39C-209ENST00000584250 KCPQ6ZWJ8 1503 aa33.05■■■□□ 2.88
TTC39C-209ENST00000584250 TJP1Q07157 1748 aa33.05■■■□□ 2.88
TTC39C-209ENST00000584250 SGIP1Q9BQI5 828 aa33.04■■■□□ 2.88
TTC39C-209ENST00000584250 TEFQ10587 303 aa33.03■■■□□ 2.88
TTC39C-209ENST00000584250 MYH14Q7Z406 1995 aaKnown RBP33.02■■■□□ 2.88
TTC39C-209ENST00000584250 MSH5O43196 834 aa33.02■■■□□ 2.88
TTC39C-209ENST00000584250 PHF14O94880 888 aa33.02■■■□□ 2.88
TTC39C-209ENST00000584250 CCDC184Q52MB2 194 aa33.02■■■□□ 2.88
TTC39C-209ENST00000584250 GNPATO15228 680 aa33.01■■■□□ 2.87
TTC39C-209ENST00000584250 UBR2Q8IWV8 1755 aa32.99■■■□□ 2.87
TTC39C-209ENST00000584250 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.99■■■□□ 2.87
TTC39C-209ENST00000584250 KCNQ3O43525 872 aa32.99■■■□□ 2.87
TTC39C-209ENST00000584250 DNAJC10Q8IXB1 793 aa32.99■■■□□ 2.87
TTC39C-209ENST00000584250 NFE2L2Q16236 605 aa32.98■■■□□ 2.87
TTC39C-209ENST00000584250 CCDC146Q8IYE0 955 aa32.98■■■□□ 2.87
TTC39C-209ENST00000584250 SLC16A10Q8TF71 515 aa32.98■■■□□ 2.87
TTC39C-209ENST00000584250 MSL1Q68DK7 614 aa32.97■■■□□ 2.87
TTC39C-209ENST00000584250 RTF1Q92541 710 aaKnown RBP32.97■■■□□ 2.87
TTC39C-209ENST00000584250 ADAMTS8Q9UP79 889 aa32.97■■■□□ 2.87
TTC39C-209ENST00000584250 CICQ96RK0 1608 aaPredicted RBP32.97■■■□□ 2.87
TTC39C-209ENST00000584250 NEFMP07197 916 aa32.96■■■□□ 2.87
TTC39C-209ENST00000584250 PPP1R1BQ9UD71 204 aaPredicted RBP32.96■■■□□ 2.87
TTC39C-209ENST00000584250 COL24A1Q17RW2 1714 aa32.96■■■□□ 2.87
TTC39C-209ENST00000584250 MAPK8IP3Q9UPT6 1336 aa32.96■■■□□ 2.87
TTC39C-209ENST00000584250 THUMPD2Q9BTF0 503 aaKnown RBP32.95■■■□□ 2.87
TTC39C-209ENST00000584250 CNTNAP4Q9C0A0 1308 aa32.95■■■□□ 2.86
TTC39C-209ENST00000584250 HTATSF1O43719 755 aaKnown RBP32.94■■■□□ 2.86
TTC39C-209ENST00000584250 HMGB2P26583 209 aaKnown RBP32.94■■■□□ 2.86
TTC39C-209ENST00000584250 CRKLP46109 303 aaKnown RBP32.94■■■□□ 2.86
TTC39C-209ENST00000584250 ZNF790Q6PG37 636 aa32.94■■■□□ 2.86
TTC39C-209ENST00000584250 ZNF496Q96IT1 587 aaPredicted RBP32.94■■■□□ 2.86
TTC39C-209ENST00000584250 SSFA2P28290 1259 aa32.93■■■□□ 2.86
TTC39C-209ENST00000584250 WDR43Q15061 677 aaKnown RBP eCLIP32.93■■■□□ 2.86
TTC39C-209ENST00000584250 RC3H1Q5TC82 1133 aaKnown RBP32.93■■■□□ 2.86
TTC39C-209ENST00000584250 BTBD11A6QL63 1104 aa32.92■■■□□ 2.86
TTC39C-209ENST00000584250 FLAD1Q8NFF5 587 aa32.92■■■□□ 2.86
TTC39C-209ENST00000584250 PNNQ9H307 717 aaKnown RBP32.92■■■□□ 2.86
TTC39C-209ENST00000584250 INTS5Q6P9B9 1019 aaKnown RBP32.91■■■□□ 2.86
TTC39C-209ENST00000584250 TTC5Q8N0Z6 440 aa32.91■■■□□ 2.86
TTC39C-209ENST00000584250 RRP7AQ9Y3A4 280 aaKnown RBP32.9■■■□□ 2.86
TTC39C-209ENST00000584250 RPS6KA4O75676 772 aa32.89■■■□□ 2.86
TTC39C-209ENST00000584250 CYP19A1P11511 503 aaPredicted RBP32.89■■■□□ 2.86
TTC39C-209ENST00000584250 MIS18AQ9NYP9 233 aa32.89■■■□□ 2.86
TTC39C-209ENST00000584250 RTCBQ9Y3I0 505 aaKnown RBP32.89■■■□□ 2.86
TTC39C-209ENST00000584250 TMPOP42166 694 aaKnown RBP32.88■■■□□ 2.85
TTC39C-209ENST00000584250 ARXQ96QS3 562 aa32.87■■■□□ 2.85
TTC39C-209ENST00000584250 HEG1Q9ULI3 1381 aa32.86■■■□□ 2.85
TTC39C-209ENST00000584250 ANP32CO43423 234 aa32.86■■■□□ 2.85
TTC39C-209ENST00000584250 RIPK4P57078 832 aa32.86■■■□□ 2.85
TTC39C-209ENST00000584250 ARHGEF1Q92888 912 aaKnown RBP32.86■■■□□ 2.85
TTC39C-209ENST00000584250 VSIG10Q8N0Z9 540 aa32.85■■■□□ 2.85
TTC39C-209ENST00000584250 RUNDC1Q96C34 613 aa32.85■■■□□ 2.85
TTC39C-209ENST00000584250 FHDC1Q9C0D6 1143 aaPredicted RBP32.85■■■□□ 2.85
TTC39C-209ENST00000584250 TRAPPC3LQ5T215 181 aa32.84■■■□□ 2.85
TTC39C-209ENST00000584250 CCDC87Q9NVE4 849 aa32.84■■■□□ 2.85
TTC39C-209ENST00000584250 C4AP0C0L4 1744 aa32.84■■■□□ 2.85
TTC39C-209ENST00000584250 TAF7Q15545 349 aaPredicted RBP32.83■■■□□ 2.85
TTC39C-209ENST00000584250 NEUROD2Q15784 382 aa32.83■■■□□ 2.85
TTC39C-209ENST00000584250 PRAMEF22A3QJZ6 481 aa32.82■■■□□ 2.84
TTC39C-209ENST00000584250 FMNL2Q96PY5 1086 aa32.82■■■□□ 2.84
TTC39C-209ENST00000584250 ZBTB1Q9Y2K1 713 aa32.82■■■□□ 2.84
TTC39C-209ENST00000584250 POLD1P28340 1107 aa32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms