RNA–Protein interactions for RNA: ENST00000584205.5

ATPAF2-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-212ENST00000584205 SLC4A9Q96Q91 983 aa26.51■■□□□ 1.83
ATPAF2-212ENST00000584205 SCN11AQ9UI33 1791 aa26.51■■□□□ 1.83
ATPAF2-212ENST00000584205 HMGB2P26583 209 aaKnown RBP26.5■■□□□ 1.83
ATPAF2-212ENST00000584205 NFATC2IPQ8NCF5 419 aa26.5■■□□□ 1.83
ATPAF2-212ENST00000584205 LGR6Q9HBX8 967 aa26.5■■□□□ 1.83
ATPAF2-212ENST00000584205 COL24A1Q17RW2 1714 aa26.49■■□□□ 1.83
ATPAF2-212ENST00000584205 ATP6V1AP38606 617 aa26.49■■□□□ 1.83
ATPAF2-212ENST00000584205 AK7Q96M32 723 aa26.48■■□□□ 1.83
ATPAF2-212ENST00000584205 RNMTO43148 476 aaKnown RBP26.47■■□□□ 1.83
ATPAF2-212ENST00000584205 SMIM5Q71RC9 77 aa26.47■■□□□ 1.83
ATPAF2-212ENST00000584205 MRC1P22897 1456 aa26.47■■□□□ 1.83
ATPAF2-212ENST00000584205 MSH5O43196 834 aa26.46■■□□□ 1.83
ATPAF2-212ENST00000584205 ARXQ96QS3 562 aa26.46■■□□□ 1.83
ATPAF2-212ENST00000584205 RBM42Q9BTD8 480 aaKnown RBP26.46■■□□□ 1.83
ATPAF2-212ENST00000584205 RSPH6AQ9H0K4 717 aa26.46■■□□□ 1.83
ATPAF2-212ENST00000584205 ADAMTS7Q9UKP4 1686 aa26.46■■□□□ 1.83
ATPAF2-212ENST00000584205 UBR3Q6ZT12 1888 aa26.46■■□□□ 1.83
ATPAF2-212ENST00000584205 FHDC1Q9C0D6 1143 aaPredicted RBP26.45■■□□□ 1.82
ATPAF2-212ENST00000584205 SLC52A2Q9HAB3 445 aa26.45■■□□□ 1.82
ATPAF2-212ENST00000584205 ZNF831Q5JPB2 1677 aa26.44■■□□□ 1.82
ATPAF2-212ENST00000584205 PRKAR2BP31323 418 aa26.43■■□□□ 1.82
ATPAF2-212ENST00000584205 FLAD1Q8NFF5 587 aa26.43■■□□□ 1.82
ATPAF2-212ENST00000584205 NUDCQ9Y266 331 aa26.43■■□□□ 1.82
ATPAF2-212ENST00000584205 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.42■■□□□ 1.82
ATPAF2-212ENST00000584205 PTCD1O75127 700 aaKnown RBP26.42■■□□□ 1.82
ATPAF2-212ENST00000584205 PHF14O94880 888 aa26.42■■□□□ 1.82
ATPAF2-212ENST00000584205 DDX10Q13206 875 aaKnown RBP26.42■■□□□ 1.82
ATPAF2-212ENST00000584205 MSL1Q68DK7 614 aa26.42■■□□□ 1.82
ATPAF2-212ENST00000584205 PHACTR3Q96KR7 559 aa26.42■■□□□ 1.82
ATPAF2-212ENST00000584205 GNPATO15228 680 aa26.41■■□□□ 1.82
ATPAF2-212ENST00000584205 U2AF1L5P0DN76 240 aaPredicted RBP26.41■■□□□ 1.82
ATPAF2-212ENST00000584205 POLD1P28340 1107 aa26.41■■□□□ 1.82
ATPAF2-212ENST00000584205 U2AF1Q01081 240 aaKnown RBP eCLIP26.41■■□□□ 1.82
ATPAF2-212ENST00000584205 GAS2L2Q8NHY3 880 aa26.41■■□□□ 1.82
ATPAF2-212ENST00000584205 SYT17Q9BSW7 474 aa26.41■■□□□ 1.82
ATPAF2-212ENST00000584205 VIRMAQ69YN4 1812 aaKnown RBP26.41■■□□□ 1.82
ATPAF2-212ENST00000584205 SSFA2P28290 1259 aa26.4■■□□□ 1.82
ATPAF2-212ENST00000584205 MAP3K5Q99683 1374 aa26.4■■□□□ 1.82
ATPAF2-212ENST00000584205 COL5A3P25940 1745 aaPredicted RBP26.39■■□□□ 1.82
ATPAF2-212ENST00000584205 IL17REQ8NFR9 667 aa26.37■■□□□ 1.81
ATPAF2-212ENST00000584205 CNTNAP4Q9C0A0 1308 aa26.37■■□□□ 1.81
ATPAF2-212ENST00000584205 GNAT3A8MTJ3 354 aa26.36■■□□□ 1.81
ATPAF2-212ENST00000584205 SLC39A6Q13433 755 aa26.36■■□□□ 1.81
ATPAF2-212ENST00000584205 RC3H1Q5TC82 1133 aaKnown RBP26.36■■□□□ 1.81
ATPAF2-212ENST00000584205 FCHSD2O94868 740 aa26.35■■□□□ 1.81
ATPAF2-212ENST00000584205 TJP1Q07157 1748 aa26.35■■□□□ 1.81
ATPAF2-212ENST00000584205 CICQ96RK0 1608 aaPredicted RBP26.35■■□□□ 1.81
ATPAF2-212ENST00000584205 KCPQ6ZWJ8 1503 aa26.34■■□□□ 1.81
ATPAF2-212ENST00000584205 MYH14Q7Z406 1995 aaKnown RBP26.33■■□□□ 1.81
ATPAF2-212ENST00000584205 RALBP1Q15311 655 aa26.32■■□□□ 1.8
ATPAF2-212ENST00000584205 RTCBQ9Y3I0 505 aaKnown RBP26.32■■□□□ 1.8
ATPAF2-212ENST00000584205 CRKLP46109 303 aaKnown RBP26.31■■□□□ 1.8
ATPAF2-212ENST00000584205 KLHL34Q8N239 644 aa26.31■■□□□ 1.8
ATPAF2-212ENST00000584205 CEMIPQ8WUJ3 1361 aa26.31■■□□□ 1.8
ATPAF2-212ENST00000584205 RPS6KA4O75676 772 aa26.3■■□□□ 1.8
ATPAF2-212ENST00000584205 UTRNP46939 3433 aa26.29■■□□□ 1.8
ATPAF2-212ENST00000584205 ZEB1P37275 1124 aaPredicted RBP26.29■■□□□ 1.8
ATPAF2-212ENST00000584205 DNAJC10Q8IXB1 793 aa26.29■■□□□ 1.8
ATPAF2-212ENST00000584205 SIPA1L3O60292 1781 aaPredicted RBP26.28■■□□□ 1.8
ATPAF2-212ENST00000584205 TEFQ10587 303 aa26.28■■□□□ 1.8
ATPAF2-212ENST00000584205 TRAPPC3LQ5T215 181 aa26.28■■□□□ 1.8
ATPAF2-212ENST00000584205 ARHGEF1Q92888 912 aaKnown RBP26.28■■□□□ 1.8
ATPAF2-212ENST00000584205 UBR2Q8IWV8 1755 aa26.28■■□□□ 1.8
ATPAF2-212ENST00000584205 ADRA2BP18089 450 aa26.27■■□□□ 1.8
ATPAF2-212ENST00000584205 INTS5Q6P9B9 1019 aaKnown RBP26.27■■□□□ 1.8
ATPAF2-212ENST00000584205 NLGN2Q8NFZ4 835 aa26.27■■□□□ 1.8
ATPAF2-212ENST00000584205 DCAF8L1A6NGE4 600 aa26.24■■□□□ 1.79
ATPAF2-212ENST00000584205 CYP19A1P11511 503 aaPredicted RBP26.24■■□□□ 1.79
ATPAF2-212ENST00000584205 PLEKHF1Q96S99 279 aa26.24■■□□□ 1.79
ATPAF2-212ENST00000584205 C4AP0C0L4 1744 aa26.23■■□□□ 1.79
ATPAF2-212ENST00000584205 MYBBP1AQ9BQG0 1328 aaKnown RBP26.23■■□□□ 1.79
ATPAF2-212ENST00000584205 ZNF790Q6PG37 636 aa26.23■■□□□ 1.79
ATPAF2-212ENST00000584205 MCM10Q7L590 875 aa26.23■■□□□ 1.79
ATPAF2-212ENST00000584205 VSIG10Q8N0Z9 540 aa26.23■■□□□ 1.79
ATPAF2-212ENST00000584205 GOLGB1Q14789 3259 aaKnown RBP26.22■■□□□ 1.79
ATPAF2-212ENST00000584205 TTC5Q8N0Z6 440 aa26.22■■□□□ 1.79
ATPAF2-212ENST00000584205 ZNF496Q96IT1 587 aaPredicted RBP26.22■■□□□ 1.79
ATPAF2-212ENST00000584205 CCDC87Q9NVE4 849 aa26.22■■□□□ 1.79
ATPAF2-212ENST00000584205 GYS1P13807 737 aa26.21■■□□□ 1.79
ATPAF2-212ENST00000584205 RFC4P35249 363 aa26.21■■□□□ 1.79
ATPAF2-212ENST00000584205 DCTN1Q14203 1278 aa26.21■■□□□ 1.79
ATPAF2-212ENST00000584205 RTF1Q92541 710 aaKnown RBP26.21■■□□□ 1.79
ATPAF2-212ENST00000584205 KCNQ3O43525 872 aa26.2■■□□□ 1.78
ATPAF2-212ENST00000584205 HTATSF1O43719 755 aaKnown RBP26.19■■□□□ 1.78
ATPAF2-212ENST00000584205 MMP10P09238 476 aa26.19■■□□□ 1.78
ATPAF2-212ENST00000584205 SRP68Q9UHB9 627 aaKnown RBP26.19■■□□□ 1.78
ATPAF2-212ENST00000584205 HEG1Q9ULI3 1381 aa26.19■■□□□ 1.78
ATPAF2-212ENST00000584205 SOS1Q07889 1333 aaPredicted RBP26.18■■□□□ 1.78
ATPAF2-212ENST00000584205 BTBD11A6QL63 1104 aa26.18■■□□□ 1.78
ATPAF2-212ENST00000584205 ZBTB1Q9Y2K1 713 aa26.18■■□□□ 1.78
ATPAF2-212ENST00000584205 CD2APQ9Y5K6 639 aa26.18■■□□□ 1.78
ATPAF2-212ENST00000584205 NLGN1Q8N2Q7 840 aa26.17■■□□□ 1.78
ATPAF2-212ENST00000584205 USP42Q9H9J4 1324 aaKnown RBP26.16■■□□□ 1.78
ATPAF2-212ENST00000584205 NEFMP07197 916 aa26.15■■□□□ 1.78
ATPAF2-212ENST00000584205 NFE2L2Q16236 605 aa26.15■■□□□ 1.78
ATPAF2-212ENST00000584205 PRKRIP1Q9H875 184 aaPredicted RBP26.15■■□□□ 1.78
ATPAF2-212ENST00000584205 GPR162Q16538 588 aa26.14■■□□□ 1.78
ATPAF2-212ENST00000584205 FMNL2Q96PY5 1086 aa26.14■■□□□ 1.78
ATPAF2-212ENST00000584205 DLG5Q8TDM6 1919 aa26.14■■□□□ 1.77
ATPAF2-212ENST00000584205 FKBP8Q14318 412 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms