RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 TTC21BQ7Z4L5 1316 aa15.7■□□□□ 0.1
CCDC47-206ENST00000584112 DLL1O00548 723 aa15.7■□□□□ 0.1
CCDC47-206ENST00000584112 MAP2K1Q02750 393 aaPredicted RBP15.69■□□□□ 0.1
CCDC47-206ENST00000584112 CCDC88AQ3V6T2 1871 aa15.69■□□□□ 0.1
CCDC47-206ENST00000584112 CUL9Q8IWT3 2517 aa15.68■□□□□ 0.1
CCDC47-206ENST00000584112 KCNH5Q8NCM2 988 aa15.68■□□□□ 0.1
CCDC47-206ENST00000584112 TIAM2Q8IVF5 1701 aa15.68■□□□□ 0.1
CCDC47-206ENST00000584112 NFAT5O94916 1531 aa15.68■□□□□ 0.1
CCDC47-206ENST00000584112 PASKQ96RG2 1323 aa15.68■□□□□ 0.1
CCDC47-206ENST00000584112 A0A0C4DFX4 3053 aa15.67■□□□□ 0.1
CCDC47-206ENST00000584112 SLC24A1O60721 1099 aa15.67■□□□□ 0.1
CCDC47-206ENST00000584112 DALRD3Q5D0E6 543 aaKnown RBP15.67■□□□□ 0.1
CCDC47-206ENST00000584112 TMEM88BA6NKF7 163 aa15.66■□□□□ 0.1
CCDC47-206ENST00000584112 PUS7Q96PZ0 661 aaKnown RBP15.66■□□□□ 0.1
CCDC47-206ENST00000584112 PIM2Q9P1W9 311 aa15.66■□□□□ 0.1
CCDC47-206ENST00000584112 WDR33Q9C0J8 1336 aaKnown RBP15.66■□□□□ 0.1
CCDC47-206ENST00000584112 CD163L1Q9NR16 1453 aa15.65■□□□□ 0.1
CCDC47-206ENST00000584112 HDGFL2Q7Z4V5 671 aaPredicted RBP15.65■□□□□ 0.1
CCDC47-206ENST00000584112 TMC1Q8TDI8 760 aa15.65■□□□□ 0.1
CCDC47-206ENST00000584112 KDM6AO15550 1401 aaPredicted RBP15.65■□□□□ 0.1
CCDC47-206ENST00000584112 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
CCDC47-206ENST00000584112 DGKZQ13574 1117 aa15.64■□□□□ 0.09
CCDC47-206ENST00000584112 HABP4Q5JVS0 413 aaKnown RBP15.64■□□□□ 0.09
CCDC47-206ENST00000584112 EDC4Q6P2E9 1401 aaKnown RBP15.64■□□□□ 0.09
CCDC47-206ENST00000584112 ZNF219Q9P2Y4 722 aaPredicted RBP15.64■□□□□ 0.09
CCDC47-206ENST00000584112 PALLDQ8WX93 1383 aa15.63■□□□□ 0.09
CCDC47-206ENST00000584112 SSFA2P28290 1259 aa15.63■□□□□ 0.09
CCDC47-206ENST00000584112 TERF2IPQ9NYB0 399 aa15.63■□□□□ 0.09
CCDC47-206ENST00000584112 USP31Q70CQ4 1352 aa15.62■□□□□ 0.09
CCDC47-206ENST00000584112 DEFB115Q30KQ5 88 aa15.62■□□□□ 0.09
CCDC47-206ENST00000584112 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.62■□□□□ 0.09
CCDC47-206ENST00000584112 ANKRD24Q8TF21 1146 aa15.62■□□□□ 0.09
CCDC47-206ENST00000584112 CCDC87Q9NVE4 849 aa15.62■□□□□ 0.09
CCDC47-206ENST00000584112 C4AP0C0L4 1744 aa15.61■□□□□ 0.09
CCDC47-206ENST00000584112 ST20-MTHFSA0A0A6YYL1 179 aa15.61■□□□□ 0.09
CCDC47-206ENST00000584112 RASSF10A6NK89 507 aa15.61■□□□□ 0.09
CCDC47-206ENST00000584112 LMNB1P20700 586 aa15.61■□□□□ 0.09
CCDC47-206ENST00000584112 CHRNA5P30532 468 aa15.61■□□□□ 0.09
CCDC47-206ENST00000584112 A0A1W2PP64 1363 aa15.61■□□□□ 0.09
CCDC47-206ENST00000584112 FAM208AQ9UK61 1670 aaKnown RBP15.6■□□□□ 0.09
CCDC47-206ENST00000584112 LTBP1Q14766 1721 aa15.6■□□□□ 0.09
CCDC47-206ENST00000584112 TESK2Q96S53 571 aa15.6■□□□□ 0.09
CCDC47-206ENST00000584112 SLC12A5Q9H2X9 1139 aa15.6■□□□□ 0.09
CCDC47-206ENST00000584112 CLSPNQ9HAW4 1339 aa15.6■□□□□ 0.09
CCDC47-206ENST00000584112 NSD3Q9BZ95 1437 aa15.6■□□□□ 0.09
CCDC47-206ENST00000584112 LINC00116Q8NCU8 138 aa15.59■□□□□ 0.09
CCDC47-206ENST00000584112 KIF20BQ96Q89 1820 aa15.59■□□□□ 0.09
CCDC47-206ENST00000584112 NME9Q86XW9 330 aa15.58■□□□□ 0.08
CCDC47-206ENST00000584112 BEGAINQ9BUH8 593 aa15.58■□□□□ 0.08
CCDC47-206ENST00000584112 TIMELESSQ9UNS1 1208 aa15.58■□□□□ 0.08
CCDC47-206ENST00000584112 GNPATO15228 680 aa15.57■□□□□ 0.08
CCDC47-206ENST00000584112 ITGBL1O95965 494 aaPredicted RBP15.57■□□□□ 0.08
CCDC47-206ENST00000584112 GCC1Q96CN9 775 aa15.57■□□□□ 0.08
CCDC47-206ENST00000584112 THSD7BQ9C0I4 1608 aa15.57■□□□□ 0.08
CCDC47-206ENST00000584112 GRM1Q13255 1194 aa15.56■□□□□ 0.08
CCDC47-206ENST00000584112 TMF1P82094 1093 aa15.55■□□□□ 0.08
CCDC47-206ENST00000584112 ZCRB1Q8TBF4 217 aaKnown RBP15.55■□□□□ 0.08
CCDC47-206ENST00000584112 FXR1P51114 621 aaKnown RBP eCLIP15.54■□□□□ 0.08
CCDC47-206ENST00000584112 DPY19L2Q6NUT2 758 aa15.54■□□□□ 0.08
CCDC47-206ENST00000584112 PCGF6Q9BYE7 350 aa15.54■□□□□ 0.08
CCDC47-206ENST00000584112 ABT1Q9ULW3 272 aaKnown RBP15.54■□□□□ 0.08
CCDC47-206ENST00000584112 CDCA8Q53HL2 280 aa15.53■□□□□ 0.08
CCDC47-206ENST00000584112 MPRIPQ6WCQ1 1025 aa15.53■□□□□ 0.08
CCDC47-206ENST00000584112 PARP3Q9Y6F1 533 aa15.53■□□□□ 0.08
CCDC47-206ENST00000584112 RGPD2P0DJD1 1756 aa15.53■□□□□ 0.08
CCDC47-206ENST00000584112 MAP2P11137 1827 aaKnown RBP15.52■□□□□ 0.08
CCDC47-206ENST00000584112 SZT2Q5T011 3432 aa15.52■□□□□ 0.08
CCDC47-206ENST00000584112 PAXIP1Q6ZW49 1069 aaPredicted RBP15.52■□□□□ 0.08
CCDC47-206ENST00000584112 LDHDQ86WU2 507 aa15.52■□□□□ 0.08
CCDC47-206ENST00000584112 NLGN1Q8N2Q7 840 aa15.52■□□□□ 0.08
CCDC47-206ENST00000584112 LTV1Q96GA3 475 aaPredicted RBP15.52■□□□□ 0.08
CCDC47-206ENST00000584112 CAPNS2Q96L46 248 aa15.52■□□□□ 0.08
CCDC47-206ENST00000584112 DDNO94850 711 aaPredicted RBP15.51■□□□□ 0.07
CCDC47-206ENST00000584112 CYP4F22Q6NT55 531 aa15.51■□□□□ 0.07
CCDC47-206ENST00000584112 GPR101Q96P66 508 aaPredicted RBP15.51■□□□□ 0.07
CCDC47-206ENST00000584112 MEGF6O75095 1541 aa15.51■□□□□ 0.07
CCDC47-206ENST00000584112 NFKBIEO00221 500 aa15.5■□□□□ 0.07
CCDC47-206ENST00000584112 AOC2O75106 756 aa15.5■□□□□ 0.07
CCDC47-206ENST00000584112 HMGB2P26583 209 aaKnown RBP15.5■□□□□ 0.07
CCDC47-206ENST00000584112 ITPK1Q13572 414 aa15.5■□□□□ 0.07
CCDC47-206ENST00000584112 COG3Q96JB2 828 aa15.5■□□□□ 0.07
CCDC47-206ENST00000584112 ITGB4P16144 1822 aa15.5■□□□□ 0.07
CCDC47-206ENST00000584112 GYS1P13807 737 aa15.49■□□□□ 0.07
CCDC47-206ENST00000584112 DICER1Q9UPY3 1922 aaKnown RBP15.48■□□□□ 0.07
CCDC47-206ENST00000584112 SLC17A8Q8NDX2 589 aa15.47■□□□□ 0.07
CCDC47-206ENST00000584112 LOC102724428A0A0B4J2F2 783 aa15.46■□□□□ 0.07
CCDC47-206ENST00000584112 SIK1P57059 783 aa15.46■□□□□ 0.07
CCDC47-206ENST00000584112 EAPPQ56P03 285 aaPredicted RBP15.46■□□□□ 0.07
CCDC47-206ENST00000584112 NBPF15Q8N660 670 aa15.46■□□□□ 0.07
CCDC47-206ENST00000584112 IP6K1Q92551 441 aa15.46■□□□□ 0.07
CCDC47-206ENST00000584112 TAF1DQ9H5J8 278 aaPredicted RBP15.46■□□□□ 0.07
CCDC47-206ENST00000584112 ERFEQ4G0M1 354 aa15.45■□□□□ 0.06
CCDC47-206ENST00000584112 TRAPPC3LQ5T215 181 aa15.45■□□□□ 0.06
CCDC47-206ENST00000584112 SMARCC1Q92922 1105 aaPredicted RBP15.45■□□□□ 0.06
CCDC47-206ENST00000584112 ANKRD26Q9UPS8 1709 aa15.45■□□□□ 0.06
CCDC47-206ENST00000584112 ADAMTS7Q9UKP4 1686 aa15.44■□□□□ 0.06
CCDC47-206ENST00000584112 MKI67P46013 3256 aaKnown RBP15.44■□□□□ 0.06
CCDC47-206ENST00000584112 FMR1Q06787 632 aaKnown RBP eCLIP15.44■□□□□ 0.06
CCDC47-206ENST00000584112 DDR1Q08345 913 aa15.44■□□□□ 0.06
CCDC47-206ENST00000584112 MAP1SQ66K74 1059 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms