RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 H3BM21 787 aa10.35□□□□□ -0.75
SMARCE1-219ENST00000583294 MAN1A2O60476 641 aa10.35□□□□□ -0.75
SMARCE1-219ENST00000583294 STAU1O95793 577 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-219ENST00000583294 GMPRP36959 345 aa10.35□□□□□ -0.75
SMARCE1-219ENST00000583294 RBM19Q9Y4C8 960 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-219ENST00000583294 ERBB4Q15303 1308 aa10.34□□□□□ -0.75
SMARCE1-219ENST00000583294 TMEM88BA6NKF7 163 aa10.34□□□□□ -0.75
SMARCE1-219ENST00000583294 SFI1A8K8P3 1242 aa10.34□□□□□ -0.75
SMARCE1-219ENST00000583294 TSEN34Q9BSV6 310 aaKnown RBP10.34□□□□□ -0.75
SMARCE1-219ENST00000583294 TRAIPQ9BWF2 469 aa10.34□□□□□ -0.75
SMARCE1-219ENST00000583294 USTQ9Y2C2 406 aa10.34□□□□□ -0.75
SMARCE1-219ENST00000583294 INSM1Q01101 510 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-219ENST00000583294 PDE4CQ08493 712 aa10.33□□□□□ -0.76
SMARCE1-219ENST00000583294 IRF7Q92985 503 aa10.33□□□□□ -0.76
SMARCE1-219ENST00000583294 TRIM52Q96A61 297 aa10.33□□□□□ -0.76
SMARCE1-219ENST00000583294 SOS2Q07890 1332 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-219ENST00000583294 DKK1O94907 266 aa10.32□□□□□ -0.76
SMARCE1-219ENST00000583294 SIX5Q8N196 739 aa10.32□□□□□ -0.76
SMARCE1-219ENST00000583294 LGR5O75473 907 aa10.31□□□□□ -0.76
SMARCE1-219ENST00000583294 SEC13P55735 322 aa10.31□□□□□ -0.76
SMARCE1-219ENST00000583294 Q6ZVU0 165 aa10.31□□□□□ -0.76
SMARCE1-219ENST00000583294 CYP2U1Q7Z449 544 aa10.31□□□□□ -0.76
SMARCE1-219ENST00000583294 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMARCE1-219ENST00000583294 DNMT3LQ9UJW3 386 aa10.31□□□□□ -0.76
SMARCE1-219ENST00000583294 GDF10P55107 478 aa10.29□□□□□ -0.76
SMARCE1-219ENST00000583294 AGBL1Q96MI9 1066 aa10.29□□□□□ -0.76
SMARCE1-219ENST00000583294 RAB6BQ9NRW1 208 aa10.29□□□□□ -0.76
SMARCE1-219ENST00000583294 SERTAD1Q9UHV2 236 aa10.29□□□□□ -0.76
SMARCE1-219ENST00000583294 FIGNL2A6NMB9 653 aa10.28□□□□□ -0.76
SMARCE1-219ENST00000583294 TMEM229AB2RXF0 380 aa10.28□□□□□ -0.76
SMARCE1-219ENST00000583294 ADH1AP07327 375 aa10.28□□□□□ -0.76
SMARCE1-219ENST00000583294 SCNN1DP51172 638 aa10.28□□□□□ -0.76
SMARCE1-219ENST00000583294 AEBP1Q8IUX7 1158 aa10.28□□□□□ -0.76
SMARCE1-219ENST00000583294 HINFPQ9BQA5 517 aa10.28□□□□□ -0.76
SMARCE1-219ENST00000583294 ETNK1Q9HBU6 452 aa10.28□□□□□ -0.76
SMARCE1-219ENST00000583294 ARHGEF10LQ9HCE6 1279 aa10.28□□□□□ -0.76
SMARCE1-219ENST00000583294 ZNF358Q9NW07 568 aa10.28□□□□□ -0.76
SMARCE1-219ENST00000583294 TTLL8A6PVC2 850 aa10.27□□□□□ -0.77
SMARCE1-219ENST00000583294 FAM69CQ0P6D2 419 aa10.27□□□□□ -0.77
SMARCE1-219ENST00000583294 TSEN2Q8NCE0 465 aaKnown RBP10.27□□□□□ -0.77
SMARCE1-219ENST00000583294 STK17AQ9UEE5 414 aa10.27□□□□□ -0.77
SMARCE1-219ENST00000583294 PPFIA3O75145 1194 aa10.26□□□□□ -0.77
SMARCE1-219ENST00000583294 GNRH1P01148 92 aa10.26□□□□□ -0.77
SMARCE1-219ENST00000583294 RELBQ01201 579 aa10.26□□□□□ -0.77
SMARCE1-219ENST00000583294 SLAIN2Q9P270 581 aa10.26□□□□□ -0.77
SMARCE1-219ENST00000583294 SPINT1O43278 529 aa10.25□□□□□ -0.77
SMARCE1-219ENST00000583294 KDF1Q8NAX2 398 aaPredicted RBP10.25□□□□□ -0.77
SMARCE1-219ENST00000583294 ZNF395Q9H8N7 513 aaPredicted RBP10.25□□□□□ -0.77
SMARCE1-219ENST00000583294 PRMT3O60678 531 aa10.24□□□□□ -0.77
SMARCE1-219ENST00000583294 INHAP05111 366 aa10.24□□□□□ -0.77
SMARCE1-219ENST00000583294 LORP23490 312 aaPredicted RBP10.24□□□□□ -0.77
SMARCE1-219ENST00000583294 TRIM26Q12899 539 aaPredicted RBP10.24□□□□□ -0.77
SMARCE1-219ENST00000583294 PRIMPOLQ96LW4 560 aa10.24□□□□□ -0.77
SMARCE1-219ENST00000583294 A0A1W2PRU2 124 aa10.23□□□□□ -0.77
SMARCE1-219ENST00000583294 PTGIRP43119 386 aa10.23□□□□□ -0.77
SMARCE1-219ENST00000583294 SWI5Q1ZZU3 235 aa10.23□□□□□ -0.77
SMARCE1-219ENST00000583294 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.23□□□□□ -0.776e-7■■□□□ 13.5
SMARCE1-219ENST00000583294 ESCO1Q5FWF5 840 aa10.23□□□□□ -0.77
SMARCE1-219ENST00000583294 TNS4Q8IZW8 715 aa10.23□□□□□ -0.77
SMARCE1-219ENST00000583294 MEN1O00255 615 aa10.22□□□□□ -0.77
SMARCE1-219ENST00000583294 BACH1O14867 736 aa10.22□□□□□ -0.77
SMARCE1-219ENST00000583294 IL2RAP01589 272 aa10.22□□□□□ -0.77
SMARCE1-219ENST00000583294 CTSOP43234 321 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-219ENST00000583294 GAS2L2Q8NHY3 880 aa10.22□□□□□ -0.77
SMARCE1-219ENST00000583294 CLP1Q92989 425 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-219ENST00000583294 INSM2Q96T92 566 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-219ENST00000583294 VSIG8P0DPA2 414 aa10.21□□□□□ -0.77
SMARCE1-219ENST00000583294 ATP2B4P23634 1241 aa10.21□□□□□ -0.77
SMARCE1-219ENST00000583294 PTSQ03393 145 aa10.21□□□□□ -0.77
SMARCE1-219ENST00000583294 KCTD17Q8N5Z5 321 aa10.21□□□□□ -0.77
SMARCE1-219ENST00000583294 CNKSR1Q969H4 720 aa10.21□□□□□ -0.77
SMARCE1-219ENST00000583294 M0R2N6 131 aa10.2□□□□□ -0.78
SMARCE1-219ENST00000583294 WASLO00401 505 aaPredicted RBP10.2□□□□□ -0.78
SMARCE1-219ENST00000583294 BRD1O95696 1058 aa10.2□□□□□ -0.78
SMARCE1-219ENST00000583294 ZSCAN1Q8NBB4 408 aa10.2□□□□□ -0.78
SMARCE1-219ENST00000583294 XAGE2Q96GT9 111 aa10.2□□□□□ -0.78
SMARCE1-219ENST00000583294 NLRP3Q96P20 1036 aa10.19□□□□□ -0.78
SMARCE1-219ENST00000583294 ESYT1Q9BSJ8 1104 aa10.19□□□□□ -0.78
SMARCE1-219ENST00000583294 SSFA2P28290 1259 aa10.18□□□□□ -0.78
SMARCE1-219ENST00000583294 SMTNP53814 917 aa10.18□□□□□ -0.78
SMARCE1-219ENST00000583294 CLN3Q13286 438 aa10.18□□□□□ -0.78
SMARCE1-219ENST00000583294 TLR1Q15399 786 aa10.18□□□□□ -0.78
SMARCE1-219ENST00000583294 TBCELQ5QJ74 424 aa10.18□□□□□ -0.78
SMARCE1-219ENST00000583294 PHLDB3Q6NSJ2 640 aa10.18□□□□□ -0.78
SMARCE1-219ENST00000583294 SLC4A9Q96Q91 983 aa10.18□□□□□ -0.78
SMARCE1-219ENST00000583294 POLMQ9NP87 494 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-219ENST00000583294 ZBTB7CA1YPR0 619 aa10.17□□□□□ -0.78
SMARCE1-219ENST00000583294 SCNN1AP37088 669 aa10.17□□□□□ -0.78
SMARCE1-219ENST00000583294 CENPCQ03188 943 aa10.17□□□□□ -0.78
SMARCE1-219ENST00000583294 B4GALNT3Q6L9W6 998 aa10.17□□□□□ -0.78
SMARCE1-219ENST00000583294 GPR161Q8N6U8 529 aaKnown RBP10.17□□□□□ -0.78
SMARCE1-219ENST00000583294 SCG3Q8WXD2 468 aaKnown RBP10.17□□□□□ -0.78
SMARCE1-219ENST00000583294 A6NJY4 79 aa10.16□□□□□ -0.78
SMARCE1-219ENST00000583294 EPHA4P54764 986 aa10.16□□□□□ -0.78
SMARCE1-219ENST00000583294 OCLNQ16625 522 aa10.16□□□□□ -0.78
SMARCE1-219ENST00000583294 TSPAN10Q9H1Z9 355 aaPredicted RBP10.16□□□□□ -0.78
SMARCE1-219ENST00000583294 WEE1P30291 646 aa10.15□□□□□ -0.78
SMARCE1-219ENST00000583294 CCDC155Q8N6L0 562 aa10.15□□□□□ -0.78
SMARCE1-219ENST00000583294 CHMP7Q8WUX9 453 aaPredicted RBP10.15□□□□□ -0.78
SMARCE1-219ENST00000583294 CXXC1Q9P0U4 656 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms