RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	DPY19L2	Q6NUT2	758 aa		7.99	□□□□□ -1.13
MSI2-216	ENST00000582772	VPS8	Q8N3P4	1428 aa		7.99	□□□□□ -1.13
MSI2-216	ENST00000582772	PIM2	Q9P1W9	311 aa		7.99	□□□□□ -1.13
MSI2-216	ENST00000582772	ABT1	Q9ULW3	272 aa	Known RBP	7.99	□□□□□ -1.13
MSI2-216	ENST00000582772	ANKRD36B	Q8N2N9	1353 aa		7.98	□□□□□ -1.13
MSI2-216	ENST00000582772	DALRD3	Q5D0E6	543 aa	Known RBP	7.98	□□□□□ -1.13
MSI2-216	ENST00000582772	CTU1	Q7Z7A3	348 aa	Known RBP	7.98	□□□□□ -1.13
MSI2-216	ENST00000582772	INSR	P06213	1382 aa		7.97	□□□□□ -1.13
MSI2-216	ENST00000582772	PPEF1	O14829	653 aa	Predicted RBP	7.97	□□□□□ -1.13
MSI2-216	ENST00000582772	GC	P02774	474 aa		7.97	□□□□□ -1.13
MSI2-216	ENST00000582772	PKN2	Q16513	984 aa	Known RBP	7.97	□□□□□ -1.13
MSI2-216	ENST00000582772	CYP4F22	Q6NT55	531 aa		7.97	□□□□□ -1.13
MSI2-216	ENST00000582772	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	7.97	□□□□□ -1.13
MSI2-216	ENST00000582772	SAGE1	Q9NXZ1	904 aa		7.97	□□□□□ -1.13
MSI2-216	ENST00000582772	ARIH1	Q9Y4X5	557 aa	Predicted RBP	7.97	□□□□□ -1.13
MSI2-216	ENST00000582772	MINK1	Q8N4C8	1332 aa	Predicted RBP	7.97	□□□□□ -1.13
MSI2-216	ENST00000582772	PAPPA2	Q9BXP8	1791 aa		7.97	□□□□□ -1.13
MSI2-216	ENST00000582772	AKAP11	Q9UKA4	1901 aa		7.96	□□□□□ -1.13
MSI2-216	ENST00000582772	IQCA1L	A6NCM1	817 aa		7.96	□□□□□ -1.14
MSI2-216	ENST00000582772	RASSF7	Q02833	373 aa		7.96	□□□□□ -1.14
MSI2-216	ENST00000582772	IGSF5	Q9NSI5	407 aa		7.96	□□□□□ -1.14
MSI2-216	ENST00000582772	RAPGEFL1	Q9UHV5	662 aa		7.96	□□□□□ -1.14
MSI2-216	ENST00000582772	STXBP5L	Q9Y2K9	1186 aa		7.96	□□□□□ -1.14
MSI2-216	ENST00000582772	SCN11A	Q9UI33	1791 aa		7.96	□□□□□ -1.14
MSI2-216	ENST00000582772	AMIGO3	Q86WK7	504 aa		7.95	□□□□□ -1.14
MSI2-216	ENST00000582772	NGDN	Q8NEJ9	315 aa	Known RBP	7.95	□□□□□ -1.14
MSI2-216	ENST00000582772	HHIPL1	Q96JK4	782 aa		7.95	□□□□□ -1.14
MSI2-216	ENST00000582772	L3MBTL3	Q96JM7	780 aa	Predicted RBP	7.95	□□□□□ -1.14
MSI2-216	ENST00000582772	STK26	Q9P289	416 aa		7.95	□□□□□ -1.14
MSI2-216	ENST00000582772	FER1L6	Q2WGJ9	1857 aa		7.95	□□□□□ -1.14
MSI2-216	ENST00000582772	POLR3A	O14802	1390 aa	Predicted RBP	7.95	□□□□□ -1.14
MSI2-216	ENST00000582772	AOC2	O75106	756 aa		7.94	□□□□□ -1.14
MSI2-216	ENST00000582772	MMP10	P09238	476 aa		7.94	□□□□□ -1.14
MSI2-216	ENST00000582772	SSFA2	P28290	1259 aa		7.94	□□□□□ -1.14
MSI2-216	ENST00000582772	GPR153	Q6NV75	609 aa		7.94	□□□□□ -1.14
MSI2-216	ENST00000582772	TAF1D	Q9H5J8	278 aa	Predicted RBP	7.94	□□□□□ -1.14
MSI2-216	ENST00000582772	TLL2	Q9Y6L7	1015 aa		7.94	□□□□□ -1.14
MSI2-216	ENST00000582772	CPSF1	Q10570	1443 aa	Known RBP	7.94	□□□□□ -1.14
MSI2-216	ENST00000582772	PRO3102	Q9H379	93 aa		7.93	□□□□□ -1.14
MSI2-216	ENST00000582772	DDX21	Q9NR30	783 aa	Known RBP eCLIP	7.93	□□□□□ -1.14
MSI2-216	ENST00000582772	CCDC87	Q9NVE4	849 aa		7.93	□□□□□ -1.14
MSI2-216	ENST00000582772	KIAA0100	Q14667	2235 aa	Known RBP	7.93	□□□□□ -1.14
MSI2-216	ENST00000582772	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	7.92	□□□□□ -1.14
MSI2-216	ENST00000582772	NUTM2G	Q5VZR2	741 aa		7.92	□□□□□ -1.14
MSI2-216	ENST00000582772	ANKRD13D	Q6ZTN6	518 aa		7.92	□□□□□ -1.14
MSI2-216	ENST00000582772	SMIM5	Q71RC9	77 aa		7.92	□□□□□ -1.14
MSI2-216	ENST00000582772	CNTROB	Q8N137	903 aa		7.92	□□□□□ -1.14
MSI2-216	ENST00000582772	RBM27	Q9P2N5	1060 aa	Known RBP	7.92	□□□□□ -1.14
MSI2-216	ENST00000582772	AXIN2	Q9Y2T1	843 aa		7.92	□□□□□ -1.14
MSI2-216	ENST00000582772	PIK3C2G	O75747	1445 aa		7.92	□□□□□ -1.14
MSI2-216	ENST00000582772	CIAPIN1	Q6FI81	312 aa		7.91	□□□□□ -1.14
MSI2-216	ENST00000582772	USP47	Q96K76	1375 aa		7.91	□□□□□ -1.14
MSI2-216	ENST00000582772	MAP2	P11137	1827 aa	Known RBP	7.91	□□□□□ -1.14
MSI2-216	ENST00000582772		A0A1W2PPC1	479 aa		7.9	□□□□□ -1.14
MSI2-216	ENST00000582772	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	7.9	□□□□□ -1.14
MSI2-216	ENST00000582772	NLRP13	Q86W25	1043 aa		7.9	□□□□□ -1.14
MSI2-216	ENST00000582772	AKAP4	Q5JQC9	854 aa		7.89	□□□□□ -1.15
MSI2-216	ENST00000582772	CHRDL2	Q6WN34	429 aa		7.89	□□□□□ -1.15
MSI2-216	ENST00000582772	ABTB2	Q8N961	1025 aa		7.89	□□□□□ -1.15
MSI2-216	ENST00000582772		H0YGN5	161 aa		7.88	□□□□□ -1.15
MSI2-216	ENST00000582772	NFKBIE	O00221	500 aa		7.88	□□□□□ -1.15
MSI2-216	ENST00000582772	IL2RB	P14784	551 aa		7.88	□□□□□ -1.15
MSI2-216	ENST00000582772	NOG	Q13253	232 aa		7.88	□□□□□ -1.15
MSI2-216	ENST00000582772	GRM1	Q13255	1194 aa		7.88	□□□□□ -1.15
MSI2-216	ENST00000582772	SAPCD2	Q86UD0	394 aa		7.88	□□□□□ -1.15
MSI2-216	ENST00000582772	AK7	Q96M32	723 aa		7.88	□□□□□ -1.15
MSI2-216	ENST00000582772	CHIC2	Q9UKJ5	165 aa		7.88	□□□□□ -1.15
MSI2-216	ENST00000582772	PRIM1	P49642	420 aa	Known RBP	7.87	□□□□□ -1.15
MSI2-216	ENST00000582772	FMR1	Q06787	632 aa	Known RBP eCLIP	7.87	□□□□□ -1.15
MSI2-216	ENST00000582772	CST9	Q5W186	159 aa		7.87	□□□□□ -1.15
MSI2-216	ENST00000582772	TMEM132E	Q6IEE7	984 aa		7.87	□□□□□ -1.15
MSI2-216	ENST00000582772	PNMA8A	Q86V59	439 aa	Predicted RBP	7.87	□□□□□ -1.15
MSI2-216	ENST00000582772	NLGN1	Q8N2Q7	840 aa		7.87	□□□□□ -1.15
MSI2-216	ENST00000582772	BAHCC1	Q9P281	2608 aa		7.86	□□□□□ -1.15
MSI2-216	ENST00000582772	NUP155	O75694	1391 aa		7.86	□□□□□ -1.15
MSI2-216	ENST00000582772	DDN	O94850	711 aa	Predicted RBP	7.86	□□□□□ -1.15
MSI2-216	ENST00000582772	MAP3K12	Q12852	859 aa		7.86	□□□□□ -1.15
MSI2-216	ENST00000582772	MAP1S	Q66K74	1059 aa	Predicted RBP	7.86	□□□□□ -1.15
MSI2-216	ENST00000582772	INTS3	Q68E01	1043 aa	Known RBP	7.86	□□□□□ -1.15
MSI2-216	ENST00000582772	CCDC24	Q8N4L8	307 aa		7.86	□□□□□ -1.15
MSI2-216	ENST00000582772	COL26A1	Q96A83	441 aa		7.86	□□□□□ -1.15
MSI2-216	ENST00000582772	PRAM1	Q96QH2	718 aa		7.86	□□□□□ -1.15
MSI2-216	ENST00000582772	ADGRF5	Q8IZF2	1346 aa		7.85	□□□□□ -1.15
MSI2-216	ENST00000582772	POTEF	A5A3E0	1075 aa		7.85	□□□□□ -1.15
MSI2-216	ENST00000582772	SOX1	O00570	391 aa	Predicted RBP	7.85	□□□□□ -1.15
MSI2-216	ENST00000582772	PHF14	O94880	888 aa		7.85	□□□□□ -1.15
MSI2-216	ENST00000582772	ERFE	Q4G0M1	354 aa		7.85	□□□□□ -1.15
MSI2-216	ENST00000582772	FBXO46	Q6PJ61	603 aa	Predicted RBP	7.85	□□□□□ -1.15
MSI2-216	ENST00000582772	POTED	Q86YR6	584 aa		7.85	□□□□□ -1.15
MSI2-216	ENST00000582772	ZFHX4	Q86UP3	3567 aa		7.85	□□□□□ -1.15
MSI2-216	ENST00000582772	FAM208A	Q9UK61	1670 aa	Known RBP	7.85	□□□□□ -1.15
MSI2-216	ENST00000582772	LTBP3	Q9NS15	1303 aa		7.84	□□□□□ -1.15
MSI2-216	ENST00000582772	WASL	O00401	505 aa	Predicted RBP	7.84	□□□□□ -1.15
MSI2-216	ENST00000582772	ARHGEF25	Q86VW2	580 aa		7.84	□□□□□ -1.15
MSI2-216	ENST00000582772	PALLD	Q8WX93	1383 aa		7.84	□□□□□ -1.16
MSI2-216	ENST00000582772	NBPF1	Q3BBV0	1214 aa		7.83	□□□□□ -1.16
MSI2-216	ENST00000582772	EAPP	Q56P03	285 aa	Predicted RBP	7.83	□□□□□ -1.16
MSI2-216	ENST00000582772	SYMPK	Q92797	1274 aa	Known RBP	7.83	□□□□□ -1.16
MSI2-216	ENST00000582772	SYTL4	Q96C24	671 aa	Predicted RBP	7.83	□□□□□ -1.16
MSI2-216	ENST00000582772	LRCH3	Q96II8	777 aa		7.83	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms