RNA–Protein interactions for RNA: ENST00000582681.1

NUP85-218, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-218ENST00000582681 IL17REQ8NFR9 667 aa10.37□□□□□ -0.75
NUP85-218ENST00000582681 ATG3Q9NT62 314 aa10.37□□□□□ -0.75
NUP85-218ENST00000582681 TMOD3Q9NYL9 352 aa10.37□□□□□ -0.75
NUP85-218ENST00000582681 LRP5O75197 1615 aa10.36□□□□□ -0.75
NUP85-218ENST00000582681 TJP1Q07157 1748 aa10.36□□□□□ -0.75
NUP85-218ENST00000582681 TUBGCP6Q96RT7 1819 aa10.36□□□□□ -0.75
NUP85-218ENST00000582681 ANP32CO43423 234 aa10.36□□□□□ -0.75
NUP85-218ENST00000582681 NFE2L2Q16236 605 aa10.36□□□□□ -0.75
NUP85-218ENST00000582681 NCBP3Q53F19 620 aaKnown RBP10.36□□□□□ -0.75
NUP85-218ENST00000582681 MPRIPQ6WCQ1 1025 aa10.36□□□□□ -0.75
NUP85-218ENST00000582681 PNISRQ8TF01 805 aaKnown RBP10.36□□□□□ -0.75
NUP85-218ENST00000582681 AKT1S1Q96B36 256 aa10.36□□□□□ -0.75
NUP85-218ENST00000582681 LGR6Q9HBX8 967 aa10.36□□□□□ -0.75
NUP85-218ENST00000582681 ANO8Q9HCE9 1232 aaPredicted RBP10.36□□□□□ -0.75
NUP85-218ENST00000582681 C4BP0C0L5 1744 aa10.36□□□□□ -0.75
NUP85-218ENST00000582681 KDM3BQ7LBC6 1761 aa10.35□□□□□ -0.75
NUP85-218ENST00000582681 CCDC184Q52MB2 194 aa10.35□□□□□ -0.75
NUP85-218ENST00000582681 SYTL4Q96C24 671 aaPredicted RBP10.35□□□□□ -0.75
NUP85-218ENST00000582681 ASAP1Q9ULH1 1129 aa10.35□□□□□ -0.75
NUP85-218ENST00000582681 ADAMTS8Q9UP79 889 aa10.35□□□□□ -0.75
NUP85-218ENST00000582681 UBR3Q6ZT12 1888 aa10.35□□□□□ -0.75
NUP85-218ENST00000582681 LOC102724428A0A0B4J2F2 783 aa10.34□□□□□ -0.75
NUP85-218ENST00000582681 SIK1P57059 783 aa10.34□□□□□ -0.75
NUP85-218ENST00000582681 CABP4P57796 275 aa10.34□□□□□ -0.75
NUP85-218ENST00000582681 NFATC2IPQ8NCF5 419 aa10.34□□□□□ -0.75
NUP85-218ENST00000582681 RUNDC1Q96C34 613 aa10.34□□□□□ -0.75
NUP85-218ENST00000582681 SLC4A9Q96Q91 983 aa10.34□□□□□ -0.75
NUP85-218ENST00000582681 WDR43Q15061 677 aaKnown RBP eCLIP10.33□□□□□ -0.76
NUP85-218ENST00000582681 SLC15A2Q16348 729 aa10.33□□□□□ -0.76
NUP85-218ENST00000582681 VSIG10Q8N0Z9 540 aa10.33□□□□□ -0.76
NUP85-218ENST00000582681 HEG1Q9ULI3 1381 aa10.33□□□□□ -0.76
NUP85-218ENST00000582681 TMPOP42166 694 aaKnown RBP10.32□□□□□ -0.76
NUP85-218ENST00000582681 ZNF827Q17R98 1081 aa10.32□□□□□ -0.76
NUP85-218ENST00000582681 NBPF14Q5TI25 921 aa10.32□□□□□ -0.76
NUP85-218ENST00000582681 BABAM1Q9NWV8 329 aa10.32□□□□□ -0.76
NUP85-218ENST00000582681 CCNL1Q9UK58 526 aaPredicted RBP10.32□□□□□ -0.76
NUP85-218ENST00000582681 MYH14Q7Z406 1995 aaKnown RBP10.32□□□□□ -0.76
NUP85-218ENST00000582681 CNTNAP4Q9C0A0 1308 aa10.32□□□□□ -0.76
NUP85-218ENST00000582681 MAPK8IP3Q9UPT6 1336 aa10.32□□□□□ -0.76
NUP85-218ENST00000582681 NEFMP07197 916 aa10.31□□□□□ -0.76
NUP85-218ENST00000582681 ITPK1Q13572 414 aa10.31□□□□□ -0.76
NUP85-218ENST00000582681 RC3H1Q5TC82 1133 aaKnown RBP10.31□□□□□ -0.76
NUP85-218ENST00000582681 SRCAPQ6ZRS2 3230 aa10.3□□□□□ -0.76
NUP85-218ENST00000582681 CCER2I3L3R5 266 aa10.3□□□□□ -0.76
NUP85-218ENST00000582681 LMOD3Q0VAK6 560 aa10.3□□□□□ -0.76
NUP85-218ENST00000582681 TEFQ10587 303 aa10.3□□□□□ -0.76
NUP85-218ENST00000582681 CCDC27Q2M243 656 aa10.3□□□□□ -0.76
NUP85-218ENST00000582681 ZNF790Q6PG37 636 aa10.3□□□□□ -0.76
NUP85-218ENST00000582681 RTF1Q92541 710 aaKnown RBP10.3□□□□□ -0.76
NUP85-218ENST00000582681 MRS2Q9HD23 443 aa10.3□□□□□ -0.76
NUP85-218ENST00000582681 TRIM35Q9UPQ4 493 aa10.3□□□□□ -0.76
NUP85-218ENST00000582681 PNPLA7Q6ZV29 1317 aa10.3□□□□□ -0.76
NUP85-218ENST00000582681 PSDA5PKW4 1024 aaPredicted RBP10.29□□□□□ -0.76
NUP85-218ENST00000582681 R3HDM1Q15032 1099 aaKnown RBP10.29□□□□□ -0.76
NUP85-218ENST00000582681 MCM10Q7L590 875 aa10.29□□□□□ -0.76
NUP85-218ENST00000582681 LINC00116Q8NCU8 138 aa10.29□□□□□ -0.76
NUP85-218ENST00000582681 STK32BQ9NY57 414 aa10.29□□□□□ -0.76
NUP85-218ENST00000582681 LAMB4A4D0S4 1761 aa10.29□□□□□ -0.76
NUP85-218ENST00000582681 C4AP0C0L4 1744 aa10.28□□□□□ -0.76
NUP85-218ENST00000582681 SSFA2P28290 1259 aa10.28□□□□□ -0.76
NUP85-218ENST00000582681 TAF7Q15545 349 aaPredicted RBP10.28□□□□□ -0.76
NUP85-218ENST00000582681 NGEFQ8N5V2 710 aa10.28□□□□□ -0.76
NUP85-218ENST00000582681 SLC16A10Q8TF71 515 aa10.28□□□□□ -0.76
NUP85-218ENST00000582681 ZNF496Q96IT1 587 aaPredicted RBP10.28□□□□□ -0.76
NUP85-218ENST00000582681 SGIP1Q9BQI5 828 aa10.28□□□□□ -0.76
NUP85-218ENST00000582681 CYP19A1P11511 503 aaPredicted RBP10.27□□□□□ -0.77
NUP85-218ENST00000582681 ADRA2BP18089 450 aa10.27□□□□□ -0.77
NUP85-218ENST00000582681 ATP6V1AP38606 617 aa10.27□□□□□ -0.77
NUP85-218ENST00000582681 KCNQ4P56696 695 aa10.27□□□□□ -0.77
NUP85-218ENST00000582681 RIPK4P57078 832 aa10.27□□□□□ -0.77
NUP85-218ENST00000582681 DCTN1Q14203 1278 aa10.27□□□□□ -0.77
NUP85-218ENST00000582681 AMIGO3Q86WK7 504 aa10.27□□□□□ -0.77
NUP85-218ENST00000582681 FLAD1Q8NFF5 587 aa10.27□□□□□ -0.77
NUP85-218ENST00000582681 BTBD11A6QL63 1104 aa10.26□□□□□ -0.77
NUP85-218ENST00000582681 CHL1O00533 1208 aa10.26□□□□□ -0.77
NUP85-218ENST00000582681 PTCD1O75127 700 aaKnown RBP10.26□□□□□ -0.77
NUP85-218ENST00000582681 ZNF853P0CG23 659 aa10.26□□□□□ -0.77
NUP85-218ENST00000582681 SLC39A6Q13433 755 aa10.26□□□□□ -0.77
NUP85-218ENST00000582681 INTS5Q6P9B9 1019 aaKnown RBP10.26□□□□□ -0.77
NUP85-218ENST00000582681 CCDC146Q8IYE0 955 aa10.26□□□□□ -0.77
NUP85-218ENST00000582681 FMNL2Q96PY5 1086 aa10.26□□□□□ -0.77
NUP85-218ENST00000582681 TEX13AQ9BXU3 409 aaPredicted RBP10.26□□□□□ -0.77
NUP85-218ENST00000582681 APAF1O14727 1248 aa10.25□□□□□ -0.77
NUP85-218ENST00000582681 RPS6KA4O75676 772 aa10.25□□□□□ -0.77
NUP85-218ENST00000582681 CRKLP46109 303 aaKnown RBP10.25□□□□□ -0.77
NUP85-218ENST00000582681 PDGFDQ9GZP0 370 aaPredicted RBP10.25□□□□□ -0.77
NUP85-218ENST00000582681 KCNQ3O43525 872 aa10.24□□□□□ -0.77
NUP85-218ENST00000582681 PTGER2P43116 358 aa10.24□□□□□ -0.77
NUP85-218ENST00000582681 EIF4A1P60842 406 aaKnown RBP10.24□□□□□ -0.77
NUP85-218ENST00000582681 DIEXFQ68CQ4 756 aaKnown RBP10.24□□□□□ -0.77
NUP85-218ENST00000582681 DNAJC10Q8IXB1 793 aa10.24□□□□□ -0.77
NUP85-218ENST00000582681 TTC5Q8N0Z6 440 aa10.24□□□□□ -0.77
NUP85-218ENST00000582681 RBM42Q9BTD8 480 aaKnown RBP10.24□□□□□ -0.77
NUP85-218ENST00000582681 THUMPD2Q9BTF0 503 aaKnown RBP10.24□□□□□ -0.77
NUP85-218ENST00000582681 MTFR1LQ9H019 292 aa10.24□□□□□ -0.77
NUP85-218ENST00000582681 TFCP2L1Q9NZI6 479 aa10.24□□□□□ -0.77
NUP85-218ENST00000582681 SOS1Q07889 1333 aaPredicted RBP10.24□□□□□ -0.77
NUP85-218ENST00000582681 IL16Q14005 1332 aa10.24□□□□□ -0.77
NUP85-218ENST00000582681 ZNF521Q96K83 1311 aa10.24□□□□□ -0.77
NUP85-218ENST00000582681 SCN7AQ01118 1682 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms