RNA–Protein interactions for RNA: ENST00000582648.5

ERBB2-211, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-211ENST00000582648 LGR6Q9HBX8 967 aa24.08■■□□□ 1.45
ERBB2-211ENST00000582648 SPON1Q9HCB6 807 aa24.08■■□□□ 1.45
ERBB2-211ENST00000582648 PNPLA7Q6ZV29 1317 aa24.08■■□□□ 1.44
ERBB2-211ENST00000582648 MAP3K5Q99683 1374 aa24.07■■□□□ 1.44
ERBB2-211ENST00000582648 NFATC2IPQ8NCF5 419 aa24.07■■□□□ 1.44
ERBB2-211ENST00000582648 RNMTO43148 476 aaKnown RBP24.06■■□□□ 1.44
ERBB2-211ENST00000582648 GAS2L2Q8NHY3 880 aa24.06■■□□□ 1.44
ERBB2-211ENST00000582648 PHACTR3Q96KR7 559 aa24.06■■□□□ 1.44
ERBB2-211ENST00000582648 RBM42Q9BTD8 480 aaKnown RBP24.06■■□□□ 1.44
ERBB2-211ENST00000582648 ATF5Q9Y2D1 282 aaPredicted RBP24.06■■□□□ 1.44
ERBB2-211ENST00000582648 ATP6V1AP38606 617 aa24.05■■□□□ 1.44
ERBB2-211ENST00000582648 MYBBP1AQ9BQG0 1328 aaKnown RBP24.05■■□□□ 1.44
ERBB2-211ENST00000582648 ITPK1Q13572 414 aa24.04■■□□□ 1.44
ERBB2-211ENST00000582648 LINC00116Q8NCU8 138 aa24.04■■□□□ 1.44
ERBB2-211ENST00000582648 SLC52A2Q9HAB3 445 aa24.04■■□□□ 1.44
ERBB2-211ENST00000582648 UBR3Q6ZT12 1888 aa24.04■■□□□ 1.44
ERBB2-211ENST00000582648 AK7Q96M32 723 aa24.03■■□□□ 1.44
ERBB2-211ENST00000582648 PPP1R1BQ9UD71 204 aaPredicted RBP24.03■■□□□ 1.44
ERBB2-211ENST00000582648 COL5A3P25940 1745 aaPredicted RBP24.02■■□□□ 1.44
ERBB2-211ENST00000582648 MSH5O43196 834 aa24.02■■□□□ 1.44
ERBB2-211ENST00000582648 MTFR1LQ9H019 292 aa24.02■■□□□ 1.44
ERBB2-211ENST00000582648 ZNF316A6NFI3 1004 aaPredicted RBP24.01■■□□□ 1.43
ERBB2-211ENST00000582648 GNAT3A8MTJ3 354 aa24.01■■□□□ 1.43
ERBB2-211ENST00000582648 PTCD1O75127 700 aaKnown RBP24.01■■□□□ 1.43
ERBB2-211ENST00000582648 FCHSD2O94868 740 aa24.01■■□□□ 1.43
ERBB2-211ENST00000582648 ZNF831Q5JPB2 1677 aa24.01■■□□□ 1.43
ERBB2-211ENST00000582648 SLC4A9Q96Q91 983 aa24■■□□□ 1.43
ERBB2-211ENST00000582648 TJP1Q07157 1748 aa24■■□□□ 1.43
ERBB2-211ENST00000582648 SIPA1L3O60292 1781 aaPredicted RBP24■■□□□ 1.43
ERBB2-211ENST00000582648 PHF14O94880 888 aa23.99■■□□□ 1.43
ERBB2-211ENST00000582648 SMIM5Q71RC9 77 aa23.99■■□□□ 1.43
ERBB2-211ENST00000582648 PTGER2P43116 358 aa23.98■■□□□ 1.43
ERBB2-211ENST00000582648 SLC39A6Q13433 755 aa23.98■■□□□ 1.43
ERBB2-211ENST00000582648 AMIGO3Q86WK7 504 aa23.98■■□□□ 1.43
ERBB2-211ENST00000582648 COL23A1Q86Y22 540 aaPredicted RBP23.98■■□□□ 1.43
ERBB2-211ENST00000582648 IL17REQ8NFR9 667 aa23.97■■□□□ 1.43
ERBB2-211ENST00000582648 DLG5Q8TDM6 1919 aa23.97■■□□□ 1.43
ERBB2-211ENST00000582648 PRKRIP1Q9H875 184 aaPredicted RBP23.97■■□□□ 1.43
ERBB2-211ENST00000582648 GNPATO15228 680 aa23.96■■□□□ 1.43
ERBB2-211ENST00000582648 UBR2Q8IWV8 1755 aa23.96■■□□□ 1.43
ERBB2-211ENST00000582648 KCPQ6ZWJ8 1503 aa23.95■■□□□ 1.43
ERBB2-211ENST00000582648 HMGB2P26583 209 aaKnown RBP23.95■■□□□ 1.42
ERBB2-211ENST00000582648 TEFQ10587 303 aa23.95■■□□□ 1.42
ERBB2-211ENST00000582648 CICQ96RK0 1608 aaPredicted RBP23.95■■□□□ 1.42
ERBB2-211ENST00000582648 NEFMP07197 916 aa23.94■■□□□ 1.42
ERBB2-211ENST00000582648 MSL1Q68DK7 614 aa23.94■■□□□ 1.42
ERBB2-211ENST00000582648 COL24A1Q17RW2 1714 aa23.93■■□□□ 1.42
ERBB2-211ENST00000582648 MYH14Q7Z406 1995 aaKnown RBP23.93■■□□□ 1.42
ERBB2-211ENST00000582648 MCM10Q7L590 875 aa23.93■■□□□ 1.42
ERBB2-211ENST00000582648 SLC16A10Q8TF71 515 aa23.93■■□□□ 1.42
ERBB2-211ENST00000582648 CEMIPQ8WUJ3 1361 aa23.92■■□□□ 1.42
ERBB2-211ENST00000582648 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.92■■□□□ 1.42
ERBB2-211ENST00000582648 RTF1Q92541 710 aaKnown RBP23.92■■□□□ 1.42
ERBB2-211ENST00000582648 SGIP1Q9BQI5 828 aa23.92■■□□□ 1.42
ERBB2-211ENST00000582648 MAPK8IP3Q9UPT6 1336 aa23.91■■□□□ 1.42
ERBB2-211ENST00000582648 DCTN1Q14203 1278 aa23.91■■□□□ 1.42
ERBB2-211ENST00000582648 PLEKHF1Q96S99 279 aa23.91■■□□□ 1.42
ERBB2-211ENST00000582648 SSFA2P28290 1259 aa23.9■■□□□ 1.42
ERBB2-211ENST00000582648 TTC5Q8N0Z6 440 aa23.9■■□□□ 1.42
ERBB2-211ENST00000582648 FLAD1Q8NFF5 587 aa23.9■■□□□ 1.42
ERBB2-211ENST00000582648 CNTNAP4Q9C0A0 1308 aa23.89■■□□□ 1.42
ERBB2-211ENST00000582648 C4AP0C0L4 1744 aa23.88■■□□□ 1.41
ERBB2-211ENST00000582648 POLD1P28340 1107 aa23.88■■□□□ 1.41
ERBB2-211ENST00000582648 DNAJC10Q8IXB1 793 aa23.88■■□□□ 1.41
ERBB2-211ENST00000582648 CRKLP46109 303 aaKnown RBP23.87■■□□□ 1.41
ERBB2-211ENST00000582648 WDR43Q15061 677 aaKnown RBP eCLIP23.87■■□□□ 1.411e-5■■■■□ 24.6
ERBB2-211ENST00000582648 ARXQ96QS3 562 aa23.87■■□□□ 1.41
ERBB2-211ENST00000582648 RTCBQ9Y3I0 505 aaKnown RBP23.87■■□□□ 1.41
ERBB2-211ENST00000582648 KLHL34Q8N239 644 aa23.86■■□□□ 1.41
ERBB2-211ENST00000582648 PNNQ9H307 717 aaKnown RBP23.86■■□□□ 1.41
ERBB2-211ENST00000582648 BTBD11A6QL63 1104 aa23.85■■□□□ 1.41
ERBB2-211ENST00000582648 NFE2L2Q16236 605 aa23.85■■□□□ 1.41
ERBB2-211ENST00000582648 ZNF790Q6PG37 636 aa23.85■■□□□ 1.41
ERBB2-211ENST00000582648 CCDC146Q8IYE0 955 aa23.85■■□□□ 1.41
ERBB2-211ENST00000582648 FHDC1Q9C0D6 1143 aaPredicted RBP23.85■■□□□ 1.41
ERBB2-211ENST00000582648 RC3H1Q5TC82 1133 aaKnown RBP23.84■■□□□ 1.41
ERBB2-211ENST00000582648 KCNQ3O43525 872 aa23.83■■□□□ 1.41
ERBB2-211ENST00000582648 ZNF496Q96IT1 587 aaPredicted RBP23.83■■□□□ 1.41
ERBB2-211ENST00000582648 HTATSF1O43719 755 aaKnown RBP23.82■■□□□ 1.4
ERBB2-211ENST00000582648 TRAPPC3LQ5T215 181 aa23.82■■□□□ 1.4
ERBB2-211ENST00000582648 THUMPD2Q9BTF0 503 aaKnown RBP23.82■■□□□ 1.4
ERBB2-211ENST00000582648 HEG1Q9ULI3 1381 aa23.81■■□□□ 1.4
ERBB2-211ENST00000582648 RPS6KA4O75676 772 aa23.81■■□□□ 1.4
ERBB2-211ENST00000582648 CYP19A1P11511 503 aaPredicted RBP23.8■■□□□ 1.4
ERBB2-211ENST00000582648 INTS5Q6P9B9 1019 aaKnown RBP23.8■■□□□ 1.4
ERBB2-211ENST00000582648 ARHGEF1Q92888 912 aaKnown RBP23.8■■□□□ 1.4
ERBB2-211ENST00000582648 CCDC87Q9NVE4 849 aa23.8■■□□□ 1.4
ERBB2-211ENST00000582648 VSIG10Q8N0Z9 540 aa23.79■■□□□ 1.4
ERBB2-211ENST00000582648 FMNL2Q96PY5 1086 aa23.79■■□□□ 1.4
ERBB2-211ENST00000582648 RRP7AQ9Y3A4 280 aaKnown RBP23.79■■□□□ 1.4
ERBB2-211ENST00000582648 KDM3BQ7LBC6 1761 aa23.78■■□□□ 1.4
ERBB2-211ENST00000582648 ADRA2BP18089 450 aa23.78■■□□□ 1.4
ERBB2-211ENST00000582648 SYT17Q9BSW7 474 aa23.78■■□□□ 1.4
ERBB2-211ENST00000582648 ADAMTS8Q9UP79 889 aa23.78■■□□□ 1.4
ERBB2-211ENST00000582648 ZBTB1Q9Y2K1 713 aa23.78■■□□□ 1.4
ERBB2-211ENST00000582648 RFC4P35249 363 aa23.77■■□□□ 1.4
ERBB2-211ENST00000582648 MIS18AQ9NYP9 233 aa23.77■■□□□ 1.4
ERBB2-211ENST00000582648 ANP32CO43423 234 aa23.76■■□□□ 1.39
ERBB2-211ENST00000582648 RIPK4P57078 832 aa23.76■■□□□ 1.39
ERBB2-211ENST00000582648 CCDC184Q52MB2 194 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms