RNA–Protein interactions for RNA: ENST00000582604.1

SPECC1-219, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3

Gene SPECC1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-219ENST00000582604 CHL1O00533 1208 aa14.57□□□□□ -0.08
SPECC1-219ENST00000582604 SF3B2Q13435 895 aaKnown RBP14.57□□□□□ -0.08
SPECC1-219ENST00000582604 DCTN1Q14203 1278 aa14.57□□□□□ -0.08
SPECC1-219ENST00000582604 ADAMTS7Q9UKP4 1686 aa14.57□□□□□ -0.08
SPECC1-219ENST00000582604 ZNF853P0CG23 659 aa14.56□□□□□ -0.08
SPECC1-219ENST00000582604 FAM182BQ5T319 152 aa14.56□□□□□ -0.08
SPECC1-219ENST00000582604 FAM196AQ6ZSG2 479 aa14.56□□□□□ -0.08
SPECC1-219ENST00000582604 CCDC125Q86Z20 511 aa14.56□□□□□ -0.08
SPECC1-219ENST00000582604 TRMT2AQ8IZ69 625 aaKnown RBP14.56□□□□□ -0.08
SPECC1-219ENST00000582604 LGR6Q9HBX8 967 aa14.56□□□□□ -0.08
SPECC1-219ENST00000582604 VIRMAQ69YN4 1812 aaKnown RBP14.56□□□□□ -0.08
SPECC1-219ENST00000582604 SHANK3Q9BYB0 1731 aa14.55□□□□□ -0.08
SPECC1-219ENST00000582604 SENP3-EIF4A1A0A087X0R7 540 aa14.55□□□□□ -0.08
SPECC1-219ENST00000582604 DUSP27Q5VZP5 1158 aa14.55□□□□□ -0.08
SPECC1-219ENST00000582604 NFATC2IPQ8NCF5 419 aa14.55□□□□□ -0.08
SPECC1-219ENST00000582604 EP400Q96L91 3159 aa14.55□□□□□ -0.08
SPECC1-219ENST00000582604 MRC1P22897 1456 aa14.55□□□□□ -0.08
SPECC1-219ENST00000582604 HOXB7P09629 217 aa14.54□□□□□ -0.08
SPECC1-219ENST00000582604 MARCH10Q8NA82 808 aaPredicted RBP14.54□□□□□ -0.08
SPECC1-219ENST00000582604 SMARCC1Q92922 1105 aaPredicted RBP14.54□□□□□ -0.08
SPECC1-219ENST00000582604 THUMPD2Q9BTF0 503 aaKnown RBP14.54□□□□□ -0.08
SPECC1-219ENST00000582604 MBIPQ9NS73 344 aa14.54□□□□□ -0.08
SPECC1-219ENST00000582604 FANCIQ9NVI1 1328 aa14.54□□□□□ -0.08
SPECC1-219ENST00000582604 KDM6AO15550 1401 aaPredicted RBP14.54□□□□□ -0.08
SPECC1-219ENST00000582604 CDCA7LQ96GN5 454 aa14.53□□□□□ -0.08
SPECC1-219ENST00000582604 ZNF790Q6PG37 636 aa14.52□□□□□ -0.09
SPECC1-219ENST00000582604 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.52□□□□□ -0.09
SPECC1-219ENST00000582604 SYTL4Q96C24 671 aaPredicted RBP14.52□□□□□ -0.09
SPECC1-219ENST00000582604 FMNL2Q96PY5 1086 aa14.52□□□□□ -0.09
SPECC1-219ENST00000582604 TEX13AQ9BXU3 409 aaPredicted RBP14.52□□□□□ -0.09
SPECC1-219ENST00000582604 KAT6BQ8WYB5 2073 aa14.52□□□□□ -0.09
SPECC1-219ENST00000582604 BRWD3Q6RI45 1802 aa14.5□□□□□ -0.09
SPECC1-219ENST00000582604 SIPA1L3O60292 1781 aaPredicted RBP14.5□□□□□ -0.09
SPECC1-219ENST00000582604 TRIM37O94972 964 aa14.49□□□□□ -0.09
SPECC1-219ENST00000582604 PRIM1P49642 420 aaKnown RBP14.49□□□□□ -0.09
SPECC1-219ENST00000582604 TWISTNBQ3B726 338 aaPredicted RBP14.49□□□□□ -0.09
SPECC1-219ENST00000582604 ALDH1L2Q3SY69 923 aa14.49□□□□□ -0.09
SPECC1-219ENST00000582604 VSIG10Q8N0Z9 540 aa14.49□□□□□ -0.09
SPECC1-219ENST00000582604 TSR2Q969E8 191 aaKnown RBP14.49□□□□□ -0.09
SPECC1-219ENST00000582604 SNRPA1P09661 255 aaKnown RBP14.48□□□□□ -0.09
SPECC1-219ENST00000582604 BAG6P46379 1132 aa14.48□□□□□ -0.09
SPECC1-219ENST00000582604 EXOSC9Q06265 439 aaKnown RBP14.48□□□□□ -0.09
SPECC1-219ENST00000582604 CCDC30Q5VVM6 783 aa14.48□□□□□ -0.09
SPECC1-219ENST00000582604 STK31Q9BXU1 1019 aa14.48□□□□□ -0.09
SPECC1-219ENST00000582604 BCL11BQ9C0K0 894 aaPredicted RBP14.48□□□□□ -0.09
SPECC1-219ENST00000582604 SPINK5Q9NQ38 1064 aaPredicted RBP14.48□□□□□ -0.09
SPECC1-219ENST00000582604 RCAN3Q9UKA8 241 aa14.48□□□□□ -0.09
SPECC1-219ENST00000582604 ITGB4P16144 1822 aa14.48□□□□□ -0.09
SPECC1-219ENST00000582604 KDM3BQ7LBC6 1761 aa14.47□□□□□ -0.09
SPECC1-219ENST00000582604 DOT1LQ8TEK3 1739 aa14.47□□□□□ -0.09
SPECC1-219ENST00000582604 EIF4A1P60842 406 aaKnown RBP14.47□□□□□ -0.09
SPECC1-219ENST00000582604 PIGBQ92521 554 aa14.47□□□□□ -0.09
SPECC1-219ENST00000582604 MS4A1P11836 297 aa14.46□□□□□ -0.09
SPECC1-219ENST00000582604 MIS18AQ9NYP9 233 aa14.46□□□□□ -0.09
SPECC1-219ENST00000582604 IPO8O15397 1037 aaKnown RBP14.45□□□□□ -0.1
SPECC1-219ENST00000582604 STARD3NLO95772 234 aa14.45□□□□□ -0.1
SPECC1-219ENST00000582604 APBA3O96018 575 aa14.45□□□□□ -0.1
SPECC1-219ENST00000582604 DEFB132Q7Z7B7 95 aa14.45□□□□□ -0.1
SPECC1-219ENST00000582604 ACSBG1Q96GR2 724 aa14.45□□□□□ -0.1
SPECC1-219ENST00000582604 NHSQ6T4R5 1651 aa14.45□□□□□ -0.1
SPECC1-219ENST00000582604 ERBB4Q15303 1308 aa14.44□□□□□ -0.1
SPECC1-219ENST00000582604 VAMP4O75379 141 aa14.44□□□□□ -0.1
SPECC1-219ENST00000582604 NPM2Q86SE8 214 aaKnown RBP14.44□□□□□ -0.1
SPECC1-219ENST00000582604 HEG1Q9ULI3 1381 aa14.44□□□□□ -0.1
SPECC1-219ENST00000582604 TOGARAM1Q9Y4F4 1720 aa14.44□□□□□ -0.1
SPECC1-219ENST00000582604 CACNA1FO60840 1977 aa14.43□□□□□ -0.1
SPECC1-219ENST00000582604 KIF16BQ96L93 1317 aa14.43□□□□□ -0.1
SPECC1-219ENST00000582604 GIGYF1O75420 1035 aaPredicted RBP14.43□□□□□ -0.1
SPECC1-219ENST00000582604 CANXP27824 592 aaKnown RBP14.43□□□□□ -0.1
SPECC1-219ENST00000582604 SLC39A6Q13433 755 aa14.43□□□□□ -0.1
SPECC1-219ENST00000582604 HDGFL1Q5TGJ6 251 aa14.43□□□□□ -0.1
SPECC1-219ENST00000582604 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
SPECC1-219ENST00000582604 ATG3Q9NT62 314 aa14.43□□□□□ -0.1
SPECC1-219ENST00000582604 PAPPAQ13219 1627 aa14.42□□□□□ -0.1
SPECC1-219ENST00000582604 EN1Q05925 392 aaPredicted RBP14.42□□□□□ -0.1
SPECC1-219ENST00000582604 C8orf58Q8NAV2 365 aa14.42□□□□□ -0.1
SPECC1-219ENST00000582604 ZNF496Q96IT1 587 aaPredicted RBP14.42□□□□□ -0.1
SPECC1-219ENST00000582604 SMC4Q9NTJ3 1288 aa14.42□□□□□ -0.1
SPECC1-219ENST00000582604 DBF4Q9UBU7 674 aaPredicted RBP14.42□□□□□ -0.1
SPECC1-219ENST00000582604 SBF2Q86WG5 1849 aa14.41□□□□□ -0.1
SPECC1-219ENST00000582604 ELL2O00472 640 aaPredicted RBP14.41□□□□□ -0.1
SPECC1-219ENST00000582604 PTCD1O75127 700 aaKnown RBP14.41□□□□□ -0.1
SPECC1-219ENST00000582604 NEFLP07196 543 aa14.41□□□□□ -0.1
SPECC1-219ENST00000582604 BRPF1P55201 1214 aaPredicted RBP14.41□□□□□ -0.1
SPECC1-219ENST00000582604 ASAP1Q9ULH1 1129 aa14.41□□□□□ -0.1
SPECC1-219ENST00000582604 PALLDQ8WX93 1383 aa14.41□□□□□ -0.1
SPECC1-219ENST00000582604 UBR2Q8IWV8 1755 aa14.41□□□□□ -0.1
SPECC1-219ENST00000582604 RARSP54136 660 aaKnown RBP14.4□□□□□ -0.1
SPECC1-219ENST00000582604 SLC27A3Q5K4L6 730 aa14.4□□□□□ -0.1
SPECC1-219ENST00000582604 HYPKQ9NX55 129 aa14.4□□□□□ -0.1
SPECC1-219ENST00000582604 ZNF831Q5JPB2 1677 aa14.39□□□□□ -0.11
SPECC1-219ENST00000582604 LOC102724428A0A0B4J2F2 783 aa14.39□□□□□ -0.11
SPECC1-219ENST00000582604 PLSCR1O15162 318 aa14.39□□□□□ -0.11
SPECC1-219ENST00000582604 DDX58O95786 925 aaKnown RBP14.39□□□□□ -0.11
SPECC1-219ENST00000582604 EIF2S2P20042 333 aaKnown RBP14.39□□□□□ -0.11
SPECC1-219ENST00000582604 ATP6V1AP38606 617 aa14.39□□□□□ -0.11
SPECC1-219ENST00000582604 SIK1P57059 783 aa14.39□□□□□ -0.11
SPECC1-219ENST00000582604 PTPRCP08575 1304 aa14.39□□□□□ -0.11
SPECC1-219ENST00000582604 KCNQ3O43525 872 aa14.38□□□□□ -0.11
SPECC1-219ENST00000582604 KCNQ2O43526 872 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms