RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 KCNQ4P56696 695 aa21.77■■□□□ 1.08
RNF43-206ENST00000582293 PNNQ9H307 717 aaKnown RBP21.77■■□□□ 1.08
RNF43-206ENST00000582293 DCTN1Q14203 1278 aa21.76■■□□□ 1.07
RNF43-206ENST00000582293 DIEXFQ68CQ4 756 aaKnown RBP21.76■■□□□ 1.07
RNF43-206ENST00000582293 MCM10Q7L590 875 aa21.76■■□□□ 1.07
RNF43-206ENST00000582293 RUNDC1Q96C34 613 aa21.76■■□□□ 1.07
RNF43-206ENST00000582293 MAPK8IP3Q9UPT6 1336 aa21.76■■□□□ 1.07
RNF43-206ENST00000582293 ANO8Q9HCE9 1232 aaPredicted RBP21.75■■□□□ 1.07
RNF43-206ENST00000582293 TMPOP42166 694 aaKnown RBP21.74■■□□□ 1.07
RNF43-206ENST00000582293 HTATSF1O43719 755 aaKnown RBP21.73■■□□□ 1.07
RNF43-206ENST00000582293 SMARCC1Q92922 1105 aaPredicted RBP21.73■■□□□ 1.07
RNF43-206ENST00000582293 SLC4A9Q96Q91 983 aa21.73■■□□□ 1.07
RNF43-206ENST00000582293 TAF1LQ8IZX4 1826 aa21.72■■□□□ 1.07
RNF43-206ENST00000582293 NEFMP07197 916 aa21.72■■□□□ 1.07
RNF43-206ENST00000582293 SLC27A3Q5K4L6 730 aa21.72■■□□□ 1.07
RNF43-206ENST00000582293 RRP7AQ9Y3A4 280 aaKnown RBP21.72■■□□□ 1.07
RNF43-206ENST00000582293 KCPQ6ZWJ8 1503 aa21.71■■□□□ 1.07
RNF43-206ENST00000582293 SLC39A6Q13433 755 aa21.71■■□□□ 1.07
RNF43-206ENST00000582293 CCNL1Q9UK58 526 aaPredicted RBP21.71■■□□□ 1.07
RNF43-206ENST00000582293 C5P01031 1676 aa21.71■■□□□ 1.07
RNF43-206ENST00000582293 ZNF831Q5JPB2 1677 aa21.71■■□□□ 1.07
RNF43-206ENST00000582293 UBR2Q8IWV8 1755 aa21.71■■□□□ 1.07
RNF43-206ENST00000582293 RIPK4P57078 832 aa21.7■■□□□ 1.06
RNF43-206ENST00000582293 THUMPD2Q9BTF0 503 aaKnown RBP21.7■■□□□ 1.06
RNF43-206ENST00000582293 LOC102724428A0A0B4J2F2 783 aa21.69■■□□□ 1.06
RNF43-206ENST00000582293 SIK1P57059 783 aa21.69■■□□□ 1.06
RNF43-206ENST00000582293 ZNF827Q17R98 1081 aa21.69■■□□□ 1.06
RNF43-206ENST00000582293 RTF1Q92541 710 aaKnown RBP21.69■■□□□ 1.06
RNF43-206ENST00000582293 TRIM35Q9UPQ4 493 aa21.69■■□□□ 1.06
RNF43-206ENST00000582293 TEFQ10587 303 aa21.68■■□□□ 1.06
RNF43-206ENST00000582293 ITPK1Q13572 414 aa21.68■■□□□ 1.06
RNF43-206ENST00000582293 CICQ96RK0 1608 aaPredicted RBP21.68■■□□□ 1.06
RNF43-206ENST00000582293 TJP1Q07157 1748 aa21.68■■□□□ 1.06
RNF43-206ENST00000582293 APAF1O14727 1248 aa21.67■■□□□ 1.06
RNF43-206ENST00000582293 MIER1Q8N108 512 aa21.67■■□□□ 1.06
RNF43-206ENST00000582293 AKT1S1Q96B36 256 aa21.67■■□□□ 1.06
RNF43-206ENST00000582293 TUBGCP6Q96RT7 1819 aa21.66■■□□□ 1.06
RNF43-206ENST00000582293 PSDA5PKW4 1024 aaPredicted RBP21.66■■□□□ 1.06
RNF43-206ENST00000582293 KCNQ3O43525 872 aa21.66■■□□□ 1.06
RNF43-206ENST00000582293 R3HDM1Q15032 1099 aaKnown RBP21.66■■□□□ 1.06
RNF43-206ENST00000582293 COL5A3P25940 1745 aaPredicted RBP21.66■■□□□ 1.06
RNF43-206ENST00000582293 CCER2I3L3R5 266 aa21.65■■□□□ 1.06
RNF43-206ENST00000582293 PTCD1O75127 700 aaKnown RBP21.65■■□□□ 1.06
RNF43-206ENST00000582293 NEUROD2Q15784 382 aa21.65■■□□□ 1.06
RNF43-206ENST00000582293 LINC00116Q8NCU8 138 aa21.65■■□□□ 1.06
RNF43-206ENST00000582293 C4BP0C0L5 1744 aa21.65■■□□□ 1.06
RNF43-206ENST00000582293 SLC15A2Q16348 729 aa21.64■■□□□ 1.05
RNF43-206ENST00000582293 NBPF14Q5TI25 921 aa21.64■■□□□ 1.05
RNF43-206ENST00000582293 RBM42Q9BTD8 480 aaKnown RBP21.64■■□□□ 1.05
RNF43-206ENST00000582293 KDM3BQ7LBC6 1761 aa21.64■■□□□ 1.05
RNF43-206ENST00000582293 SENP3-EIF4A1A0A087X0R7 540 aa21.63■■□□□ 1.05
RNF43-206ENST00000582293 ATP6V1AP38606 617 aa21.63■■□□□ 1.05
RNF43-206ENST00000582293 ZNF790Q6PG37 636 aa21.63■■□□□ 1.05
RNF43-206ENST00000582293 FAM9BQ8IZU0 186 aa21.63■■□□□ 1.05
RNF43-206ENST00000582293 CASZ1Q86V15 1759 aa21.63■■□□□ 1.05
RNF43-206ENST00000582293 BTBD11A6QL63 1104 aa21.62■■□□□ 1.05
RNF43-206ENST00000582293 PDGFDQ9GZP0 370 aaPredicted RBP21.62■■□□□ 1.05
RNF43-206ENST00000582293 QSER1Q2KHR3 1735 aa21.62■■□□□ 1.05
RNF43-206ENST00000582293 TAF7Q15545 349 aaPredicted RBP21.61■■□□□ 1.05
RNF43-206ENST00000582293 AMIGO3Q86WK7 504 aa21.61■■□□□ 1.05
RNF43-206ENST00000582293 ZNF496Q96IT1 587 aaPredicted RBP21.61■■□□□ 1.05
RNF43-206ENST00000582293 STK32BQ9NY57 414 aa21.61■■□□□ 1.05
RNF43-206ENST00000582293 MIS18AQ9NYP9 233 aa21.61■■□□□ 1.05
RNF43-206ENST00000582293 LMOD3Q0VAK6 560 aa21.59■■□□□ 1.05
RNF43-206ENST00000582293 UBR3Q6ZT12 1888 aa21.58■■□□□ 1.05
RNF43-206ENST00000582293 MYH14Q7Z406 1995 aaKnown RBP21.58■■□□□ 1.05
RNF43-206ENST00000582293 DNAJC10Q8IXB1 793 aa21.58■■□□□ 1.05
RNF43-206ENST00000582293 PNPLA7Q6ZV29 1317 aa21.57■■□□□ 1.04
RNF43-206ENST00000582293 SMIM5Q71RC9 77 aa21.57■■□□□ 1.04
RNF43-206ENST00000582293 TTC5Q8N0Z6 440 aa21.57■■□□□ 1.04
RNF43-206ENST00000582293 HEG1Q9ULI3 1381 aa21.57■■□□□ 1.04
RNF43-206ENST00000582293 VSIG10Q8N0Z9 540 aa21.56■■□□□ 1.04
RNF43-206ENST00000582293 CNTNAP4Q9C0A0 1308 aa21.55■■□□□ 1.04
RNF43-206ENST00000582293 PRAMEF22A3QJZ6 481 aa21.54■■□□□ 1.04
RNF43-206ENST00000582293 CYP19A1P11511 503 aaPredicted RBP21.54■■□□□ 1.04
RNF43-206ENST00000582293 CCDC27Q2M243 656 aa21.53■■□□□ 1.04
RNF43-206ENST00000582293 NCBP3Q53F19 620 aaKnown RBP21.53■■□□□ 1.04
RNF43-206ENST00000582293 INTS5Q6P9B9 1019 aaKnown RBP21.53■■□□□ 1.04
RNF43-206ENST00000582293 FMNL2Q96PY5 1086 aa21.53■■□□□ 1.04
RNF43-206ENST00000582293 TFCP2L1Q9NZI6 479 aa21.53■■□□□ 1.04
RNF43-206ENST00000582293 CHL1O00533 1208 aa21.52■■□□□ 1.04
RNF43-206ENST00000582293 ZNF853P0CG23 659 aa21.52■■□□□ 1.04
RNF43-206ENST00000582293 CRKLP46109 303 aaKnown RBP21.52■■□□□ 1.04
RNF43-206ENST00000582293 EIF4A1P60842 406 aaKnown RBP21.52■■□□□ 1.04
RNF43-206ENST00000582293 RC3H1Q5TC82 1133 aaKnown RBP21.52■■□□□ 1.04
RNF43-206ENST00000582293 COL23A1Q86Y22 540 aaPredicted RBP21.51■■□□□ 1.03
RNF43-206ENST00000582293 WWC1Q8IX03 1113 aa21.51■■□□□ 1.03
RNF43-206ENST00000582293 AK7Q96M32 723 aa21.51■■□□□ 1.03
RNF43-206ENST00000582293 BABAM1Q9NWV8 329 aa21.51■■□□□ 1.03
RNF43-206ENST00000582293 GNPATO15228 680 aa21.5■■□□□ 1.03
RNF43-206ENST00000582293 TSPYL4Q9UJ04 414 aa21.5■■□□□ 1.03
RNF43-206ENST00000582293 USP16Q9Y5T5 823 aa21.49■■□□□ 1.03
RNF43-206ENST00000582293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.48■■□□□ 1.03
RNF43-206ENST00000582293 HMGB2P26583 209 aaKnown RBP21.48■■□□□ 1.03
RNF43-206ENST00000582293 CFAP44Q96MT7 982 aa21.48■■□□□ 1.03
RNF43-206ENST00000582293 SALL2Q9Y467 1007 aaPredicted RBP21.48■■□□□ 1.03
RNF43-206ENST00000582293 LAMB4A4D0S4 1761 aa21.48■■□□□ 1.03
RNF43-206ENST00000582293 COL24A1Q17RW2 1714 aa21.47■■□□□ 1.03
RNF43-206ENST00000582293 GIGYF1O75420 1035 aaPredicted RBP21.47■■□□□ 1.03
RNF43-206ENST00000582293 RPS6KA4O75676 772 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms