RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 CCDC116Q8IYX3 515 aa13.22□□□□□ -0.29
CDH8-207ENST00000582242 ESF1Q9H501 851 aaKnown RBP13.22□□□□□ -0.29
CDH8-207ENST00000582242 WASLO00401 505 aaPredicted RBP13.21□□□□□ -0.29
CDH8-207ENST00000582242 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.21□□□□□ -0.29
CDH8-207ENST00000582242 ZNF784Q8NCA9 323 aaPredicted RBP13.21□□□□□ -0.29
CDH8-207ENST00000582242 PRIMPOLQ96LW4 560 aa13.21□□□□□ -0.29
CDH8-207ENST00000582242 CYLDQ9NQC7 956 aa13.21□□□□□ -0.29
CDH8-207ENST00000582242 ZNF358Q9NW07 568 aa13.21□□□□□ -0.29
CDH8-207ENST00000582242 TMEM229AB2RXF0 380 aa13.2□□□□□ -0.3
CDH8-207ENST00000582242 TSEN2Q8NCE0 465 aaKnown RBP13.2□□□□□ -0.3
CDH8-207ENST00000582242 HINFPQ9BQA5 517 aa13.2□□□□□ -0.3
CDH8-207ENST00000582242 GMPR2Q9P2T1 348 aaKnown RBP13.2□□□□□ -0.3
CDH8-207ENST00000582242 WEE1P30291 646 aa13.19□□□□□ -0.3
CDH8-207ENST00000582242 SCNN1DP51172 638 aa13.19□□□□□ -0.3
CDH8-207ENST00000582242 PPP1R26Q5T8A7 1209 aaPredicted RBP13.19□□□□□ -0.3
CDH8-207ENST00000582242 J3QL48 77 aa13.18□□□□□ -0.3
CDH8-207ENST00000582242 LILRA1O75019 489 aa13.18□□□□□ -0.3
CDH8-207ENST00000582242 SERPINB4P48594 390 aa13.18□□□□□ -0.3
CDH8-207ENST00000582242 NACADO15069 1562 aa13.17□□□□□ -0.3
CDH8-207ENST00000582242 SOWAHDA6NJG2 315 aa13.17□□□□□ -0.3
CDH8-207ENST00000582242 GDF10P55107 478 aa13.17□□□□□ -0.3
CDH8-207ENST00000582242 CYP2U1Q7Z449 544 aa13.17□□□□□ -0.3
CDH8-207ENST00000582242 NR3C2P08235 984 aa13.16□□□□□ -0.3
CDH8-207ENST00000582242 SCNN1AP37088 669 aa13.16□□□□□ -0.3
CDH8-207ENST00000582242 RANGAP1P46060 587 aaPredicted RBP13.16□□□□□ -0.3
CDH8-207ENST00000582242 LCE2AQ5TA79 106 aaPredicted RBP13.16□□□□□ -0.3
CDH8-207ENST00000582242 C11orf95C9JLR9 678 aaPredicted RBP13.15□□□□□ -0.3
CDH8-207ENST00000582242 BACH1O14867 736 aa13.15□□□□□ -0.3
CDH8-207ENST00000582242 TREML4Q6UXN2 200 aa13.15□□□□□ -0.3
CDH8-207ENST00000582242 LGR5O75473 907 aa13.14□□□□□ -0.31
CDH8-207ENST00000582242 INHAP05111 366 aa13.14□□□□□ -0.31
CDH8-207ENST00000582242 PGPEP1Q9NXJ5 209 aa13.14□□□□□ -0.31
CDH8-207ENST00000582242 EGFL7Q9UHF1 273 aa13.14□□□□□ -0.31
CDH8-207ENST00000582242 EMILIN1Q9Y6C2 1016 aa13.14□□□□□ -0.31
CDH8-207ENST00000582242 SCRIBQ14160 1630 aa13.13□□□□□ -0.31
CDH8-207ENST00000582242 GNRH1P01148 92 aa13.13□□□□□ -0.31
CDH8-207ENST00000582242 ETNK1Q9HBU6 452 aa13.13□□□□□ -0.31
CDH8-207ENST00000582242 STAU1O95793 577 aaKnown RBP13.12□□□□□ -0.31
CDH8-207ENST00000582242 IGFBP4P22692 258 aa13.12□□□□□ -0.31
CDH8-207ENST00000582242 EPHA4P54764 986 aa13.12□□□□□ -0.31
CDH8-207ENST00000582242 FKBP5Q13451 457 aaPredicted RBP13.12□□□□□ -0.31
CDH8-207ENST00000582242 HPS1Q92902 700 aa13.11□□□□□ -0.31
CDH8-207ENST00000582242 SLC4A9Q96Q91 983 aa13.11□□□□□ -0.31
CDH8-207ENST00000582242 ATP13A2Q9NQ11 1180 aa13.11□□□□□ -0.31
CDH8-207ENST00000582242 FOXO3O43524 673 aa13.1□□□□□ -0.31
CDH8-207ENST00000582242 ADD1P35611 737 aaKnown RBP13.1□□□□□ -0.31
CDH8-207ENST00000582242 COL26A1Q96A83 441 aa13.1□□□□□ -0.31
CDH8-207ENST00000582242 PTCD1O75127 700 aaKnown RBP13.09□□□□□ -0.31
CDH8-207ENST00000582242 ESCO1Q5FWF5 840 aa13.09□□□□□ -0.31
CDH8-207ENST00000582242 FOXD4L5Q5VV16 416 aaPredicted RBP13.09□□□□□ -0.31
CDH8-207ENST00000582242 FOXD4L4Q8WXT5 416 aaPredicted RBP13.09□□□□□ -0.31
CDH8-207ENST00000582242 NNTQ13423 1086 aa13.08□□□□□ -0.32
CDH8-207ENST00000582242 TNS4Q8IZW8 715 aa13.08□□□□□ -0.32
CDH8-207ENST00000582242 GAS2L2Q8NHY3 880 aa13.08□□□□□ -0.32
CDH8-207ENST00000582242 ALDH1A1P00352 501 aa13.07□□□□□ -0.32
CDH8-207ENST00000582242 PURBQ96QR8 312 aaKnown RBP13.07□□□□□ -0.32
CDH8-207ENST00000582242 MKNK1Q9BUB5 465 aa13.07□□□□□ -0.32
CDH8-207ENST00000582242 SERTAD1Q9UHV2 236 aa13.07□□□□□ -0.32
CDH8-207ENST00000582242 AMOTL2Q9Y2J4 779 aa13.07□□□□□ -0.32
CDH8-207ENST00000582242 SCG3Q8WXD2 468 aaKnown RBP13.06□□□□□ -0.32
CDH8-207ENST00000582242 SEPT3Q9UH03 358 aa13.06□□□□□ -0.32
CDH8-207ENST00000582242 C21orf2O43822 256 aa13.05□□□□□ -0.32
CDH8-207ENST00000582242 ICMTO60725 284 aa13.05□□□□□ -0.32
CDH8-207ENST00000582242 ABL1P00519 1130 aa13.05□□□□□ -0.32
CDH8-207ENST00000582242 ADH1AP07327 375 aa13.05□□□□□ -0.32
CDH8-207ENST00000582242 FOXK2Q01167 660 aa13.05□□□□□ -0.32
CDH8-207ENST00000582242 MTFR1Q15390 333 aa13.05□□□□□ -0.32
CDH8-207ENST00000582242 GTF3C2Q8WUA4 911 aaPredicted RBP13.05□□□□□ -0.32
CDH8-207ENST00000582242 TSPAN10Q9H1Z9 355 aaPredicted RBP13.05□□□□□ -0.32
CDH8-207ENST00000582242 ARHGEF10LQ9HCE6 1279 aa13.05□□□□□ -0.32
CDH8-207ENST00000582242 WASF2Q9Y6W5 498 aa13.05□□□□□ -0.32
CDH8-207ENST00000582242 ATAD2Q6PL18 1390 aa13.05□□□□□ -0.32
CDH8-207ENST00000582242 ZNF211Q13398 564 aaPredicted RBP13.04□□□□□ -0.32
CDH8-207ENST00000582242 XAGE2Q96GT9 111 aa13.04□□□□□ -0.32
CDH8-207ENST00000582242 TRIM47Q96LD4 638 aa13.04□□□□□ -0.32
CDH8-207ENST00000582242 SENP2Q9HC62 589 aa13.04□□□□□ -0.32
CDH8-207ENST00000582242 SCHIP1Q9P0W5 487 aaPredicted RBP13.04□□□□□ -0.32
CDH8-207ENST00000582242 WFS1O76024 890 aa13.03□□□□□ -0.32
CDH8-207ENST00000582242 SMTNP53814 917 aa13.03□□□□□ -0.32
CDH8-207ENST00000582242 CAPN12Q6ZSI9 719 aa13.03□□□□□ -0.32
CDH8-207ENST00000582242 RAB6BQ9NRW1 208 aa13.03□□□□□ -0.32
CDH8-207ENST00000582242 A6NJY4 79 aa13.02□□□□□ -0.33
CDH8-207ENST00000582242 H3BRB1 525 aa13.02□□□□□ -0.33
CDH8-207ENST00000582242 IL2RAP01589 272 aa13.02□□□□□ -0.33
CDH8-207ENST00000582242 SNRPBP14678 240 aaKnown RBP13.02□□□□□ -0.33
CDH8-207ENST00000582242 ERCC3P19447 782 aa13.02□□□□□ -0.33
CDH8-207ENST00000582242 NFX1Q12986 1120 aaKnown RBP13.02□□□□□ -0.33
CDH8-207ENST00000582242 DNAJC14Q6Y2X3 702 aaPredicted RBP13.02□□□□□ -0.33
CDH8-207ENST00000582242 KLF16Q9BXK1 252 aaPredicted RBP13.02□□□□□ -0.33
CDH8-207ENST00000582242 TUT1Q9H6E5 874 aaKnown RBP13.02□□□□□ -0.33
CDH8-207ENST00000582242 BIN2Q9UBW5 565 aaPredicted RBP13.02□□□□□ -0.33
CDH8-207ENST00000582242 DNMT3AQ9Y6K1 912 aaPredicted RBP13.02□□□□□ -0.33
CDH8-207ENST00000582242 SF3B2Q13435 895 aaKnown RBP13.01□□□□□ -0.33
CDH8-207ENST00000582242 Q6ZVU0 165 aa13.01□□□□□ -0.33
CDH8-207ENST00000582242 GLYCTKQ8IVS8 523 aa13.01□□□□□ -0.33
CDH8-207ENST00000582242 STAG2Q8N3U4 1231 aa13.01□□□□□ -0.33
CDH8-207ENST00000582242 KDF1Q8NAX2 398 aaPredicted RBP13.01□□□□□ -0.33
CDH8-207ENST00000582242 HRH3Q9Y5N1 445 aa13.01□□□□□ -0.33
CDH8-207ENST00000582242 SLC9A9Q8IVB4 645 aa13□□□□□ -0.33
CDH8-207ENST00000582242 MARSP56192 900 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms