RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 DCTN1Q14203 1278 aa26.36■■□□□ 1.81
TOP3A-213ENST00000582230 NCBP3Q53F19 620 aaKnown RBP26.34■■□□□ 1.81
TOP3A-213ENST00000582230 BTAF1O14981 1849 aa26.34■■□□□ 1.81
TOP3A-213ENST00000582230 ITGB4P16144 1822 aa26.33■■□□□ 1.81
TOP3A-213ENST00000582230 ATG3Q9NT62 314 aa26.33■■□□□ 1.81
TOP3A-213ENST00000582230 ASAP1Q9ULH1 1129 aa26.33■■□□□ 1.81
TOP3A-213ENST00000582230 PALLDQ8WX93 1383 aa26.33■■□□□ 1.8
TOP3A-213ENST00000582230 KAT6BQ8WYB5 2073 aa26.32■■□□□ 1.8
TOP3A-213ENST00000582230 EZH2Q15910 746 aaKnown RBP26.32■■□□□ 1.8
TOP3A-213ENST00000582230 TRIM35Q9UPQ4 493 aa26.32■■□□□ 1.8
TOP3A-213ENST00000582230 TAF7Q15545 349 aaPredicted RBP26.3■■□□□ 1.8
TOP3A-213ENST00000582230 TXNRD1Q16881 649 aa26.3■■□□□ 1.8
TOP3A-213ENST00000582230 NGEFQ8N5V2 710 aa26.3■■□□□ 1.8
TOP3A-213ENST00000582230 CCDC27Q2M243 656 aa26.29■■□□□ 1.8
TOP3A-213ENST00000582230 SLC27A3Q5K4L6 730 aa26.29■■□□□ 1.8
TOP3A-213ENST00000582230 PROM2Q8N271 834 aa26.29■■□□□ 1.8
TOP3A-213ENST00000582230 THUMPD2Q9BTF0 503 aaKnown RBP26.29■■□□□ 1.8
TOP3A-213ENST00000582230 RGPD3A6NKT7 1758 aaPredicted RBP26.28■■□□□ 1.8
TOP3A-213ENST00000582230 RGPD4Q7Z3J3 1758 aa26.28■■□□□ 1.8
TOP3A-213ENST00000582230 DLG5Q8TDM6 1919 aa26.28■■□□□ 1.8
TOP3A-213ENST00000582230 BTBD11A6QL63 1104 aa26.28■■□□□ 1.8
TOP3A-213ENST00000582230 HMGB2P26583 209 aaKnown RBP26.28■■□□□ 1.8
TOP3A-213ENST00000582230 CALD1Q05682 793 aaKnown RBP26.26■■□□□ 1.79
TOP3A-213ENST00000582230 TTC5Q8N0Z6 440 aa26.26■■□□□ 1.79
TOP3A-213ENST00000582230 LOC102724428A0A0B4J2F2 783 aa26.25■■□□□ 1.79
TOP3A-213ENST00000582230 SIK1P57059 783 aa26.25■■□□□ 1.79
TOP3A-213ENST00000582230 ZNF790Q6PG37 636 aa26.25■■□□□ 1.79
TOP3A-213ENST00000582230 CCNL1Q9UK58 526 aaPredicted RBP26.25■■□□□ 1.79
TOP3A-213ENST00000582230 SLC39A6Q13433 755 aa26.24■■□□□ 1.79
TOP3A-213ENST00000582230 BABAM1Q9NWV8 329 aa26.24■■□□□ 1.79
TOP3A-213ENST00000582230 RBM42Q9BTD8 480 aaKnown RBP26.23■■□□□ 1.79
TOP3A-213ENST00000582230 VIRMAQ69YN4 1812 aaKnown RBP26.23■■□□□ 1.79
TOP3A-213ENST00000582230 PTCD1O75127 700 aaKnown RBP26.22■■□□□ 1.79
TOP3A-213ENST00000582230 WWC1Q8IX03 1113 aa26.22■■□□□ 1.79
TOP3A-213ENST00000582230 LRRC4BQ9NT99 713 aa26.22■■□□□ 1.79
TOP3A-213ENST00000582230 SIPA1L3O60292 1781 aaPredicted RBP26.21■■□□□ 1.79
TOP3A-213ENST00000582230 LY75O60449 1722 aa26.2■■□□□ 1.79
TOP3A-213ENST00000582230 SENP3-EIF4A1A0A087X0R7 540 aa26.2■■□□□ 1.78
TOP3A-213ENST00000582230 ATP6V1AP38606 617 aa26.2■■□□□ 1.78
TOP3A-213ENST00000582230 VSIG10Q8N0Z9 540 aa26.19■■□□□ 1.78
TOP3A-213ENST00000582230 MIS18AQ9NYP9 233 aa26.19■■□□□ 1.78
TOP3A-213ENST00000582230 PAPPAQ13219 1627 aa26.18■■□□□ 1.78
TOP3A-213ENST00000582230 KCNQ4P56696 695 aa26.18■■□□□ 1.78
TOP3A-213ENST00000582230 NBPF14Q5TI25 921 aa26.18■■□□□ 1.78
TOP3A-213ENST00000582230 CFAP44Q96MT7 982 aa26.18■■□□□ 1.78
TOP3A-213ENST00000582230 FMNL2Q96PY5 1086 aa26.18■■□□□ 1.78
TOP3A-213ENST00000582230 TSPYL4Q9UJ04 414 aa26.18■■□□□ 1.78
TOP3A-213ENST00000582230 SALL2Q9Y467 1007 aaPredicted RBP26.18■■□□□ 1.78
TOP3A-213ENST00000582230 RREB1Q92766 1687 aa26.18■■□□□ 1.78
TOP3A-213ENST00000582230 CHL1O00533 1208 aa26.17■■□□□ 1.78
TOP3A-213ENST00000582230 ZNF496Q96IT1 587 aaPredicted RBP26.17■■□□□ 1.78
TOP3A-213ENST00000582230 SLC4A9Q96Q91 983 aa26.17■■□□□ 1.78
TOP3A-213ENST00000582230 KCNQ3O43525 872 aa26.16■■□□□ 1.78
TOP3A-213ENST00000582230 WDR63Q8IWG1 891 aa26.16■■□□□ 1.78
TOP3A-213ENST00000582230 IFT57Q9NWB7 429 aa26.16■■□□□ 1.78
TOP3A-213ENST00000582230 KCPQ6ZWJ8 1503 aa26.15■■□□□ 1.78
TOP3A-213ENST00000582230 GNAI1P63096 354 aa26.15■■□□□ 1.78
TOP3A-213ENST00000582230 LAS1LQ9Y4W2 734 aaKnown RBP26.15■■□□□ 1.78
TOP3A-213ENST00000582230 IL16Q14005 1332 aa26.14■■□□□ 1.78
TOP3A-213ENST00000582230 ITPK1Q13572 414 aa26.14■■□□□ 1.78
TOP3A-213ENST00000582230 HEG1Q9ULI3 1381 aa26.14■■□□□ 1.78
TOP3A-213ENST00000582230 ZNF831Q5JPB2 1677 aa26.13■■□□□ 1.77
TOP3A-213ENST00000582230 ZNF853P0CG23 659 aa26.13■■□□□ 1.77
TOP3A-213ENST00000582230 TEX13AQ9BXU3 409 aaPredicted RBP26.13■■□□□ 1.77
TOP3A-213ENST00000582230 EIF4A1P60842 406 aaKnown RBP26.12■■□□□ 1.77
TOP3A-213ENST00000582230 STK32BQ9NY57 414 aa26.12■■□□□ 1.77
TOP3A-213ENST00000582230 NUP188Q5SRE5 1749 aa26.11■■□□□ 1.77
TOP3A-213ENST00000582230 UBR2Q8IWV8 1755 aa26.11■■□□□ 1.77
TOP3A-213ENST00000582230 SNRPA1P09661 255 aaKnown RBP26.11■■□□□ 1.77
TOP3A-213ENST00000582230 LINC00116Q8NCU8 138 aa26.11■■□□□ 1.77
TOP3A-213ENST00000582230 SLC15A2Q16348 729 aa26.09■■□□□ 1.77
TOP3A-213ENST00000582230 DNAJC10Q8IXB1 793 aa26.09■■□□□ 1.77
TOP3A-213ENST00000582230 AKT1S1Q96B36 256 aa26.09■■□□□ 1.77
TOP3A-213ENST00000582230 MBIPQ9NS73 344 aa26.09■■□□□ 1.77
TOP3A-213ENST00000582230 ZNF521Q96K83 1311 aa26.09■■□□□ 1.77
TOP3A-213ENST00000582230 STARD3NLO95772 234 aa26.08■■□□□ 1.77
TOP3A-213ENST00000582230 RC3H1Q5TC82 1133 aaKnown RBP26.08■■□□□ 1.77
TOP3A-213ENST00000582230 ANO8Q9HCE9 1232 aaPredicted RBP26.08■■□□□ 1.77
TOP3A-213ENST00000582230 KDM3BQ7LBC6 1761 aa26.07■■□□□ 1.76
TOP3A-213ENST00000582230 CICQ96RK0 1608 aaPredicted RBP26.06■■□□□ 1.76
TOP3A-213ENST00000582230 CYP19A1P11511 503 aaPredicted RBP26.06■■□□□ 1.76
TOP3A-213ENST00000582230 ZNF827Q17R98 1081 aa26.06■■□□□ 1.76
TOP3A-213ENST00000582230 AK7Q96M32 723 aa26.06■■□□□ 1.76
TOP3A-213ENST00000582230 CNTNAP4Q9C0A0 1308 aa26.06■■□□□ 1.76
TOP3A-213ENST00000582230 C5P01031 1676 aa26.06■■□□□ 1.76
TOP3A-213ENST00000582230 GIGYF1O75420 1035 aaPredicted RBP26.05■■□□□ 1.76
TOP3A-213ENST00000582230 TFCP2L1Q9NZI6 479 aa26.05■■□□□ 1.76
TOP3A-213ENST00000582230 CRKLP46109 303 aaKnown RBP26.04■■□□□ 1.76
TOP3A-213ENST00000582230 HNRNPUQ00839 825 aaKnown RBP eCLIP26.04■■□□□ 1.76
TOP3A-213ENST00000582230 GOLGA2Q08379 1002 aa26.03■■□□□ 1.76
TOP3A-213ENST00000582230 MYH16Q9H6N6 1097 aa26.03■■□□□ 1.76
TOP3A-213ENST00000582230 C4BP0C0L5 1744 aa26.02■■□□□ 1.76
TOP3A-213ENST00000582230 R3HDM1Q15032 1099 aaKnown RBP26.02■■□□□ 1.76
TOP3A-213ENST00000582230 CCDC87Q9NVE4 849 aa26.02■■□□□ 1.76
TOP3A-213ENST00000582230 USP16Q9Y5T5 823 aa26.02■■□□□ 1.76
TOP3A-213ENST00000582230 TJP1Q07157 1748 aa26.02■■□□□ 1.76
TOP3A-213ENST00000582230 INTS5Q6P9B9 1019 aaKnown RBP26.01■■□□□ 1.75
TOP3A-213ENST00000582230 TAF1LQ8IZX4 1826 aa26.01■■□□□ 1.75
TOP3A-213ENST00000582230 PRAMEF22A3QJZ6 481 aa26■■□□□ 1.75
TOP3A-213ENST00000582230 GNPATO15228 680 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms