RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
TOP3A-212ENST00000582122 PLEKHF1Q96S99 279 aa13.77□□□□□ -0.21
TOP3A-212ENST00000582122 SCN11AQ9UI33 1791 aa13.76□□□□□ -0.21
TOP3A-212ENST00000582122 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
TOP3A-212ENST00000582122 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
TOP3A-212ENST00000582122 SIK1P57059 783 aa13.75□□□□□ -0.21
TOP3A-212ENST00000582122 NFE2L2Q16236 605 aa13.75□□□□□ -0.21
TOP3A-212ENST00000582122 RUNDC1Q96C34 613 aa13.75□□□□□ -0.21
TOP3A-212ENST00000582122 ATG3Q9NT62 314 aa13.75□□□□□ -0.21
TOP3A-212ENST00000582122 LY75O60449 1722 aa13.75□□□□□ -0.21
TOP3A-212ENST00000582122 MRC1P22897 1456 aa13.74□□□□□ -0.21
TOP3A-212ENST00000582122 CEMIPQ8WUJ3 1361 aa13.74□□□□□ -0.21
TOP3A-212ENST00000582122 UTRNP46939 3433 aa13.74□□□□□ -0.21
TOP3A-212ENST00000582122 SLC15A2Q16348 729 aa13.74□□□□□ -0.21
TOP3A-212ENST00000582122 LGR6Q9HBX8 967 aa13.74□□□□□ -0.21
TOP3A-212ENST00000582122 MRS2Q9HD23 443 aa13.74□□□□□ -0.21
TOP3A-212ENST00000582122 ASAP1Q9ULH1 1129 aa13.74□□□□□ -0.21
TOP3A-212ENST00000582122 ADAMTS7Q9UKP4 1686 aa13.74□□□□□ -0.21
TOP3A-212ENST00000582122 ZBTB7AO95365 584 aa13.73□□□□□ -0.21
TOP3A-212ENST00000582122 TTC5Q8N0Z6 440 aa13.73□□□□□ -0.21
TOP3A-212ENST00000582122 ZNF784Q8NCA9 323 aaPredicted RBP13.73□□□□□ -0.21
TOP3A-212ENST00000582122 FLAD1Q8NFF5 587 aa13.73□□□□□ -0.21
TOP3A-212ENST00000582122 IL17REQ8NFR9 667 aa13.73□□□□□ -0.21
TOP3A-212ENST00000582122 PNISRQ8TF01 805 aaKnown RBP13.73□□□□□ -0.21
TOP3A-212ENST00000582122 LRRC4BQ9NT99 713 aa13.73□□□□□ -0.21
TOP3A-212ENST00000582122 ADAMTS8Q9UP79 889 aa13.73□□□□□ -0.21
TOP3A-212ENST00000582122 PTGER2P43116 358 aa13.72□□□□□ -0.21
TOP3A-212ENST00000582122 VSIG10Q8N0Z9 540 aa13.72□□□□□ -0.21
TOP3A-212ENST00000582122 MTFR1LQ9H019 292 aa13.72□□□□□ -0.21
TOP3A-212ENST00000582122 ATP6V1AP38606 617 aa13.71□□□□□ -0.21
TOP3A-212ENST00000582122 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
TOP3A-212ENST00000582122 TEX13AQ9BXU3 409 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-212ENST00000582122 TFCP2L1Q9NZI6 479 aa13.71□□□□□ -0.21
TOP3A-212ENST00000582122 ZNF831Q5JPB2 1677 aa13.7□□□□□ -0.22
TOP3A-212ENST00000582122 TMPOP42166 694 aaKnown RBP13.7□□□□□ -0.22
TOP3A-212ENST00000582122 RIPK4P57078 832 aa13.7□□□□□ -0.22
TOP3A-212ENST00000582122 TAF7Q15545 349 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-212ENST00000582122 SLC16A10Q8TF71 515 aa13.7□□□□□ -0.22
TOP3A-212ENST00000582122 AKT1S1Q96B36 256 aa13.7□□□□□ -0.22
TOP3A-212ENST00000582122 BABAM1Q9NWV8 329 aa13.7□□□□□ -0.22
TOP3A-212ENST00000582122 BTBD11A6QL63 1104 aa13.69□□□□□ -0.22
TOP3A-212ENST00000582122 CALD1Q05682 793 aaKnown RBP13.69□□□□□ -0.22
TOP3A-212ENST00000582122 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
TOP3A-212ENST00000582122 RC3H1Q5TC82 1133 aaKnown RBP13.69□□□□□ -0.22
TOP3A-212ENST00000582122 ZNF790Q6PG37 636 aa13.69□□□□□ -0.22
TOP3A-212ENST00000582122 AK7Q96M32 723 aa13.69□□□□□ -0.22
TOP3A-212ENST00000582122 SYT17Q9BSW7 474 aa13.69□□□□□ -0.22
TOP3A-212ENST00000582122 FHDC1Q9C0D6 1143 aaPredicted RBP13.69□□□□□ -0.22
TOP3A-212ENST00000582122 PDGFDQ9GZP0 370 aaPredicted RBP13.69□□□□□ -0.22
TOP3A-212ENST00000582122 PAPPAQ13219 1627 aa13.68□□□□□ -0.22
TOP3A-212ENST00000582122 PTCD1O75127 700 aaKnown RBP13.68□□□□□ -0.22
TOP3A-212ENST00000582122 MCM10Q7L590 875 aa13.68□□□□□ -0.22
TOP3A-212ENST00000582122 FMNL2Q96PY5 1086 aa13.68□□□□□ -0.22
TOP3A-212ENST00000582122 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
TOP3A-212ENST00000582122 VIRMAQ69YN4 1812 aaKnown RBP13.67□□□□□ -0.22
TOP3A-212ENST00000582122 CHD4Q14839 1912 aa13.67□□□□□ -0.22
TOP3A-212ENST00000582122 STARD3NLO95772 234 aa13.67□□□□□ -0.22
TOP3A-212ENST00000582122 ADRA2BP18089 450 aa13.67□□□□□ -0.22
TOP3A-212ENST00000582122 NGEFQ8N5V2 710 aa13.67□□□□□ -0.22
TOP3A-212ENST00000582122 CNTNAP4Q9C0A0 1308 aa13.66□□□□□ -0.22
TOP3A-212ENST00000582122 C5P01031 1676 aa13.66□□□□□ -0.22
TOP3A-212ENST00000582122 SENP3-EIF4A1A0A087X0R7 540 aa13.66□□□□□ -0.22
TOP3A-212ENST00000582122 CCER2I3L3R5 266 aa13.66□□□□□ -0.22
TOP3A-212ENST00000582122 SSFA2P28290 1259 aa13.66□□□□□ -0.22
TOP3A-212ENST00000582122 CCDC146Q8IYE0 955 aa13.66□□□□□ -0.22
TOP3A-212ENST00000582122 KCNQ4P56696 695 aa13.65□□□□□ -0.22
TOP3A-212ENST00000582122 SLC39A6Q13433 755 aa13.65□□□□□ -0.22
TOP3A-212ENST00000582122 ZNF827Q17R98 1081 aa13.65□□□□□ -0.22
TOP3A-212ENST00000582122 DIEXFQ68CQ4 756 aaKnown RBP13.65□□□□□ -0.22
TOP3A-212ENST00000582122 SGIP1Q9BQI5 828 aa13.65□□□□□ -0.22
TOP3A-212ENST00000582122 CICQ96RK0 1608 aaPredicted RBP13.64□□□□□ -0.23
TOP3A-212ENST00000582122 QSER1Q2KHR3 1735 aa13.64□□□□□ -0.23
TOP3A-212ENST00000582122 ITPK1Q13572 414 aa13.64□□□□□ -0.23
TOP3A-212ENST00000582122 LINC00116Q8NCU8 138 aa13.64□□□□□ -0.23
TOP3A-212ENST00000582122 ARXQ96QS3 562 aa13.64□□□□□ -0.23
TOP3A-212ENST00000582122 RTCBQ9Y3I0 505 aaKnown RBP13.64□□□□□ -0.23
TOP3A-212ENST00000582122 TAF1LQ8IZX4 1826 aa13.64□□□□□ -0.23
TOP3A-212ENST00000582122 SIPA1L3O60292 1781 aaPredicted RBP13.63□□□□□ -0.23
TOP3A-212ENST00000582122 DLG5Q8TDM6 1919 aa13.63□□□□□ -0.23
TOP3A-212ENST00000582122 HEG1Q9ULI3 1381 aa13.63□□□□□ -0.23
TOP3A-212ENST00000582122 APAF1O14727 1248 aa13.63□□□□□ -0.23
TOP3A-212ENST00000582122 GNPATO15228 680 aa13.63□□□□□ -0.23
TOP3A-212ENST00000582122 SNRPA1P09661 255 aaKnown RBP13.63□□□□□ -0.23
TOP3A-212ENST00000582122 C1QTNF8P60827 252 aa13.63□□□□□ -0.23
TOP3A-212ENST00000582122 DCTN1Q14203 1278 aa13.63□□□□□ -0.23
TOP3A-212ENST00000582122 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
TOP3A-212ENST00000582122 CCDC184Q52MB2 194 aa13.63□□□□□ -0.23
TOP3A-212ENST00000582122 SLC4A9Q96Q91 983 aa13.63□□□□□ -0.23
TOP3A-212ENST00000582122 C4BP0C0L5 1744 aa13.63□□□□□ -0.23
TOP3A-212ENST00000582122 RPS6KA4O75676 772 aa13.62□□□□□ -0.23
TOP3A-212ENST00000582122 CCDC27Q2M243 656 aa13.62□□□□□ -0.23
TOP3A-212ENST00000582122 NPM2Q86SE8 214 aaKnown RBP13.62□□□□□ -0.23
TOP3A-212ENST00000582122 ZNF496Q96IT1 587 aaPredicted RBP13.62□□□□□ -0.23
TOP3A-212ENST00000582122 KCPQ6ZWJ8 1503 aa13.62□□□□□ -0.23
TOP3A-212ENST00000582122 PNPLA7Q6ZV29 1317 aa13.62□□□□□ -0.23
TOP3A-212ENST00000582122 UBR2Q8IWV8 1755 aa13.61□□□□□ -0.23
TOP3A-212ENST00000582122 MSH5O43196 834 aa13.61□□□□□ -0.23
TOP3A-212ENST00000582122 CRKLP46109 303 aaKnown RBP13.61□□□□□ -0.23
TOP3A-212ENST00000582122 TRAPPC3LQ5T215 181 aa13.61□□□□□ -0.23
TOP3A-212ENST00000582122 CHMP4AQ9BY43 222 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms