RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 EP400Q96L91 3159 aa11.7□□□□□ -0.54
RTTN-208ENST00000581709 CALD1Q05682 793 aaKnown RBP11.7□□□□□ -0.54
RTTN-208ENST00000581709 NCBP3Q53F19 620 aaKnown RBP11.7□□□□□ -0.54
RTTN-208ENST00000581709 NBPF14Q5TI25 921 aa11.7□□□□□ -0.54
RTTN-208ENST00000581709 TTC5Q8N0Z6 440 aa11.7□□□□□ -0.54
RTTN-208ENST00000581709 PROM2Q8N271 834 aa11.7□□□□□ -0.54
RTTN-208ENST00000581709 NGEFQ8N5V2 710 aa11.7□□□□□ -0.54
RTTN-208ENST00000581709 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
RTTN-208ENST00000581709 WNK3Q9BYP7 1800 aa11.7□□□□□ -0.54
RTTN-208ENST00000581709 PKD1L3Q7Z443 1732 aa11.69□□□□□ -0.54
RTTN-208ENST00000581709 CEMIPQ8WUJ3 1361 aa11.69□□□□□ -0.54
RTTN-208ENST00000581709 PTCD1O75127 700 aaKnown RBP11.69□□□□□ -0.54
RTTN-208ENST00000581709 CCNL1Q9UK58 526 aaPredicted RBP11.69□□□□□ -0.54
RTTN-208ENST00000581709 TRIM35Q9UPQ4 493 aa11.69□□□□□ -0.54
RTTN-208ENST00000581709 PALLDQ8WX93 1383 aa11.68□□□□□ -0.54
RTTN-208ENST00000581709 LOC102724428A0A0B4J2F2 783 aa11.68□□□□□ -0.54
RTTN-208ENST00000581709 ATP6V1AP38606 617 aa11.68□□□□□ -0.54
RTTN-208ENST00000581709 SIK1P57059 783 aa11.68□□□□□ -0.54
RTTN-208ENST00000581709 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
RTTN-208ENST00000581709 CCDC27Q2M243 656 aa11.68□□□□□ -0.54
RTTN-208ENST00000581709 ZNF790Q6PG37 636 aa11.68□□□□□ -0.54
RTTN-208ENST00000581709 THUMPD2Q9BTF0 503 aaKnown RBP11.68□□□□□ -0.54
RTTN-208ENST00000581709 BABAM1Q9NWV8 329 aa11.67□□□□□ -0.54
RTTN-208ENST00000581709 MIS18AQ9NYP9 233 aa11.67□□□□□ -0.54
RTTN-208ENST00000581709 SALL2Q9Y467 1007 aaPredicted RBP11.67□□□□□ -0.54
RTTN-208ENST00000581709 WWC1Q8IX03 1113 aa11.66□□□□□ -0.54
RTTN-208ENST00000581709 LRRC4BQ9NT99 713 aa11.66□□□□□ -0.54
RTTN-208ENST00000581709 LAS1LQ9Y4W2 734 aaKnown RBP11.66□□□□□ -0.54
RTTN-208ENST00000581709 SENP3-EIF4A1A0A087X0R7 540 aa11.65□□□□□ -0.54
RTTN-208ENST00000581709 KCNQ4P56696 695 aa11.65□□□□□ -0.54
RTTN-208ENST00000581709 VSIG10Q8N0Z9 540 aa11.65□□□□□ -0.54
RTTN-208ENST00000581709 FMNL2Q96PY5 1086 aa11.65□□□□□ -0.54
RTTN-208ENST00000581709 TEX13AQ9BXU3 409 aaPredicted RBP11.65□□□□□ -0.54
RTTN-208ENST00000581709 STK32BQ9NY57 414 aa11.65□□□□□ -0.54
RTTN-208ENST00000581709 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
RTTN-208ENST00000581709 SHANK3Q9BYB0 1731 aa11.64□□□□□ -0.55
RTTN-208ENST00000581709 CHL1O00533 1208 aa11.64□□□□□ -0.55
RTTN-208ENST00000581709 GNAI1P63096 354 aa11.64□□□□□ -0.55
RTTN-208ENST00000581709 WDR63Q8IWG1 891 aa11.64□□□□□ -0.55
RTTN-208ENST00000581709 ZNF496Q96IT1 587 aaPredicted RBP11.64□□□□□ -0.55
RTTN-208ENST00000581709 CFAP44Q96MT7 982 aa11.64□□□□□ -0.55
RTTN-208ENST00000581709 KCNQ3O43525 872 aa11.63□□□□□ -0.55
RTTN-208ENST00000581709 STARD3NLO95772 234 aa11.63□□□□□ -0.55
RTTN-208ENST00000581709 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
RTTN-208ENST00000581709 IFT57Q9NWB7 429 aa11.63□□□□□ -0.55
RTTN-208ENST00000581709 TFCP2L1Q9NZI6 479 aa11.63□□□□□ -0.55
RTTN-208ENST00000581709 NHSQ6T4R5 1651 aa11.62□□□□□ -0.55
RTTN-208ENST00000581709 SLC15A2Q16348 729 aa11.62□□□□□ -0.55
RTTN-208ENST00000581709 AK7Q96M32 723 aa11.62□□□□□ -0.55
RTTN-208ENST00000581709 SLC4A9Q96Q91 983 aa11.62□□□□□ -0.55
RTTN-208ENST00000581709 KAT6BQ8WYB5 2073 aa11.61□□□□□ -0.55
RTTN-208ENST00000581709 EIF4A1P60842 406 aaKnown RBP11.61□□□□□ -0.55
RTTN-208ENST00000581709 ITPK1Q13572 414 aa11.61□□□□□ -0.55
RTTN-208ENST00000581709 R3HDM1Q15032 1099 aaKnown RBP11.61□□□□□ -0.55
RTTN-208ENST00000581709 RC3H1Q5TC82 1133 aaKnown RBP11.61□□□□□ -0.55
RTTN-208ENST00000581709 DNAJC10Q8IXB1 793 aa11.61□□□□□ -0.55
RTTN-208ENST00000581709 AKT1S1Q96B36 256 aa11.61□□□□□ -0.55
RTTN-208ENST00000581709 MRC1P22897 1456 aa11.61□□□□□ -0.55
RTTN-208ENST00000581709 IL16Q14005 1332 aa11.6□□□□□ -0.55
RTTN-208ENST00000581709 HEG1Q9ULI3 1381 aa11.6□□□□□ -0.55
RTTN-208ENST00000581709 ZNF853P0CG23 659 aa11.6□□□□□ -0.55
RTTN-208ENST00000581709 LINC00116Q8NCU8 138 aa11.6□□□□□ -0.55
RTTN-208ENST00000581709 FLAD1Q8NFF5 587 aa11.6□□□□□ -0.55
RTTN-208ENST00000581709 DOT1LQ8TEK3 1739 aa11.6□□□□□ -0.55
RTTN-208ENST00000581709 SBF2Q86WG5 1849 aa11.59□□□□□ -0.55
RTTN-208ENST00000581709 GIGYF1O75420 1035 aaPredicted RBP11.59□□□□□ -0.55
RTTN-208ENST00000581709 CYP19A1P11511 503 aaPredicted RBP11.59□□□□□ -0.55
RTTN-208ENST00000581709 NPM2Q86SE8 214 aaKnown RBP11.59□□□□□ -0.55
RTTN-208ENST00000581709 CHMP4AQ9BY43 222 aa11.59□□□□□ -0.55
RTTN-208ENST00000581709 MBIPQ9NS73 344 aa11.59□□□□□ -0.55
RTTN-208ENST00000581709 RTCBQ9Y3I0 505 aaKnown RBP11.59□□□□□ -0.55
RTTN-208ENST00000581709 GNPATO15228 680 aa11.58□□□□□ -0.56
RTTN-208ENST00000581709 MSH5O43196 834 aa11.58□□□□□ -0.56
RTTN-208ENST00000581709 CRKLP46109 303 aaKnown RBP11.58□□□□□ -0.56
RTTN-208ENST00000581709 GOLGA2Q08379 1002 aa11.58□□□□□ -0.56
RTTN-208ENST00000581709 TRAPPC3LQ5T215 181 aa11.58□□□□□ -0.56
RTTN-208ENST00000581709 MYH16Q9H6N6 1097 aa11.58□□□□□ -0.56
RTTN-208ENST00000581709 ANO8Q9HCE9 1232 aaPredicted RBP11.58□□□□□ -0.56
RTTN-208ENST00000581709 CCDC87Q9NVE4 849 aa11.58□□□□□ -0.56
RTTN-208ENST00000581709 USP16Q9Y5T5 823 aa11.58□□□□□ -0.56
RTTN-208ENST00000581709 TNS1Q9HBL0 1735 aaKnown RBP11.57□□□□□ -0.56
RTTN-208ENST00000581709 TOGARAM1Q9Y4F4 1720 aa11.57□□□□□ -0.56
RTTN-208ENST00000581709 PSDA5PKW4 1024 aaPredicted RBP11.57□□□□□ -0.56
RTTN-208ENST00000581709 RPS6KA4O75676 772 aa11.57□□□□□ -0.56
RTTN-208ENST00000581709 HNRNPUQ00839 825 aaKnown RBP eCLIP11.57□□□□□ -0.56
RTTN-208ENST00000581709 ZNF827Q17R98 1081 aa11.57□□□□□ -0.56
RTTN-208ENST00000581709 INTS5Q6P9B9 1019 aaKnown RBP11.57□□□□□ -0.56
RTTN-208ENST00000581709 BTAF1O14981 1849 aa11.57□□□□□ -0.56
RTTN-208ENST00000581709 CNTNAP4Q9C0A0 1308 aa11.57□□□□□ -0.56
RTTN-208ENST00000581709 ADAMTS7Q9UKP4 1686 aa11.56□□□□□ -0.56
RTTN-208ENST00000581709 CANXP27824 592 aaKnown RBP11.56□□□□□ -0.56
RTTN-208ENST00000581709 SSFA2P28290 1259 aa11.56□□□□□ -0.56
RTTN-208ENST00000581709 SCN11AQ9UI33 1791 aa11.56□□□□□ -0.56
RTTN-208ENST00000581709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.55□□□□□ -0.56
RTTN-208ENST00000581709 PRAMEF22A3QJZ6 481 aa11.55□□□□□ -0.56
RTTN-208ENST00000581709 E9PSI1 815 aa11.55□□□□□ -0.56
RTTN-208ENST00000581709 ELL2O00472 640 aaPredicted RBP11.55□□□□□ -0.56
RTTN-208ENST00000581709 PHF14O94880 888 aa11.55□□□□□ -0.56
RTTN-208ENST00000581709 A1BGP04217 495 aa11.55□□□□□ -0.56
RTTN-208ENST00000581709 HOXB7P09629 217 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms