RNA–Protein interactions for RNA: ENST00000581356.1

SLC9A3R1-204, Transcript of SLC9A3 regulator 1, humanhuman

TSL 3

Gene SLC9A3R1, Length 519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-204ENST00000581356 LINC00116Q8NCU8 138 aa17.04■□□□□ 0.32
SLC9A3R1-204ENST00000581356 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
SLC9A3R1-204ENST00000581356 LGR6Q9HBX8 967 aa17.04■□□□□ 0.32
SLC9A3R1-204ENST00000581356 TAF1LQ8IZX4 1826 aa17.03■□□□□ 0.32
SLC9A3R1-204ENST00000581356 AK7Q96M32 723 aa17.03■□□□□ 0.32
SLC9A3R1-204ENST00000581356 SMIM5Q71RC9 77 aa17.02■□□□□ 0.32
SLC9A3R1-204ENST00000581356 SLC4A9Q96Q91 983 aa17.02■□□□□ 0.32
SLC9A3R1-204ENST00000581356 ARXQ96QS3 562 aa17.02■□□□□ 0.32
SLC9A3R1-204ENST00000581356 NUDCQ9Y266 331 aa17.02■□□□□ 0.32
SLC9A3R1-204ENST00000581356 C4BP0C0L5 1744 aa17.01■□□□□ 0.31
SLC9A3R1-204ENST00000581356 RNMTO43148 476 aaKnown RBP17.01■□□□□ 0.31
SLC9A3R1-204ENST00000581356 AMIGO3Q86WK7 504 aa17.01■□□□□ 0.31
SLC9A3R1-204ENST00000581356 FHDC1Q9C0D6 1143 aaPredicted RBP17.01■□□□□ 0.31
SLC9A3R1-204ENST00000581356 PTCD1O75127 700 aaKnown RBP17■□□□□ 0.31
SLC9A3R1-204ENST00000581356 PHF14O94880 888 aa17■□□□□ 0.31
SLC9A3R1-204ENST00000581356 POLD1P28340 1107 aa17■□□□□ 0.31
SLC9A3R1-204ENST00000581356 DDX10Q13206 875 aaKnown RBP17■□□□□ 0.31
SLC9A3R1-204ENST00000581356 FLAD1Q8NFF5 587 aa17■□□□□ 0.31
SLC9A3R1-204ENST00000581356 SLC52A2Q9HAB3 445 aa17■□□□□ 0.31
SLC9A3R1-204ENST00000581356 U2AF1L5P0DN76 240 aaPredicted RBP16.99■□□□□ 0.31
SLC9A3R1-204ENST00000581356 PRKAR2BP31323 418 aa16.99■□□□□ 0.31
SLC9A3R1-204ENST00000581356 U2AF1Q01081 240 aaKnown RBP eCLIP16.99■□□□□ 0.31
SLC9A3R1-204ENST00000581356 MSL1Q68DK7 614 aa16.99■□□□□ 0.31
SLC9A3R1-204ENST00000581356 SYT17Q9BSW7 474 aa16.99■□□□□ 0.31
SLC9A3R1-204ENST00000581356 SCN11AQ9UI33 1791 aa16.99■□□□□ 0.31
SLC9A3R1-204ENST00000581356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.98■□□□□ 0.31
SLC9A3R1-204ENST00000581356 GNPATO15228 680 aa16.98■□□□□ 0.31
SLC9A3R1-204ENST00000581356 PHACTR3Q96KR7 559 aa16.98■□□□□ 0.31
SLC9A3R1-204ENST00000581356 RSPH6AQ9H0K4 717 aa16.98■□□□□ 0.31
SLC9A3R1-204ENST00000581356 GAS2L2Q8NHY3 880 aa16.97■□□□□ 0.31
SLC9A3R1-204ENST00000581356 SSFA2P28290 1259 aa16.96■□□□□ 0.31
SLC9A3R1-204ENST00000581356 MAP3K5Q99683 1374 aa16.95■□□□□ 0.3
SLC9A3R1-204ENST00000581356 GNAT3A8MTJ3 354 aa16.95■□□□□ 0.3
SLC9A3R1-204ENST00000581356 FCHSD2O94868 740 aa16.95■□□□□ 0.3
SLC9A3R1-204ENST00000581356 SLC39A6Q13433 755 aa16.95■□□□□ 0.3
SLC9A3R1-204ENST00000581356 KLHL34Q8N239 644 aa16.95■□□□□ 0.3
SLC9A3R1-204ENST00000581356 IL17REQ8NFR9 667 aa16.95■□□□□ 0.3
SLC9A3R1-204ENST00000581356 UBR3Q6ZT12 1888 aa16.95■□□□□ 0.3
SLC9A3R1-204ENST00000581356 COL24A1Q17RW2 1714 aa16.94■□□□□ 0.3
SLC9A3R1-204ENST00000581356 DCAF8L1A6NGE4 600 aa16.94■□□□□ 0.3
SLC9A3R1-204ENST00000581356 RC3H1Q5TC82 1133 aaKnown RBP16.94■□□□□ 0.3
SLC9A3R1-204ENST00000581356 ZNF831Q5JPB2 1677 aa16.94■□□□□ 0.3
SLC9A3R1-204ENST00000581356 MRC1P22897 1456 aa16.93■□□□□ 0.3
SLC9A3R1-204ENST00000581356 RTCBQ9Y3I0 505 aaKnown RBP16.93■□□□□ 0.3
SLC9A3R1-204ENST00000581356 CNTNAP4Q9C0A0 1308 aa16.93■□□□□ 0.3
SLC9A3R1-204ENST00000581356 ADAMTS7Q9UKP4 1686 aa16.92■□□□□ 0.3
SLC9A3R1-204ENST00000581356 ZEB1P37275 1124 aaPredicted RBP16.92■□□□□ 0.3
SLC9A3R1-204ENST00000581356 RALBP1Q15311 655 aa16.92■□□□□ 0.3
SLC9A3R1-204ENST00000581356 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
SLC9A3R1-204ENST00000581356 RPS6KA4O75676 772 aa16.91■□□□□ 0.3
SLC9A3R1-204ENST00000581356 CRKLP46109 303 aaKnown RBP16.91■□□□□ 0.3
SLC9A3R1-204ENST00000581356 TEFQ10587 303 aa16.91■□□□□ 0.3
SLC9A3R1-204ENST00000581356 VIRMAQ69YN4 1812 aaKnown RBP16.91■□□□□ 0.3
SLC9A3R1-204ENST00000581356 DNAJC10Q8IXB1 793 aa16.9■□□□□ 0.3
SLC9A3R1-204ENST00000581356 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
SLC9A3R1-204ENST00000581356 COL5A3P25940 1745 aaPredicted RBP16.9■□□□□ 0.3
SLC9A3R1-204ENST00000581356 ADRA2BP18089 450 aa16.88■□□□□ 0.29
SLC9A3R1-204ENST00000581356 TTC5Q8N0Z6 440 aa16.88■□□□□ 0.29
SLC9A3R1-204ENST00000581356 NLGN2Q8NFZ4 835 aa16.88■□□□□ 0.29
SLC9A3R1-204ENST00000581356 CEMIPQ8WUJ3 1361 aa16.88■□□□□ 0.29
SLC9A3R1-204ENST00000581356 TJP1Q07157 1748 aa16.87■□□□□ 0.29
SLC9A3R1-204ENST00000581356 KCPQ6ZWJ8 1503 aa16.87■□□□□ 0.29
SLC9A3R1-204ENST00000581356 RFC4P35249 363 aa16.87■□□□□ 0.29
SLC9A3R1-204ENST00000581356 INTS5Q6P9B9 1019 aaKnown RBP16.87■□□□□ 0.29
SLC9A3R1-204ENST00000581356 MCM10Q7L590 875 aa16.87■□□□□ 0.29
SLC9A3R1-204ENST00000581356 RTF1Q92541 710 aaKnown RBP16.87■□□□□ 0.29
SLC9A3R1-204ENST00000581356 MYH14Q7Z406 1995 aaKnown RBP16.87■□□□□ 0.29
SLC9A3R1-204ENST00000581356 CYP19A1P11511 503 aaPredicted RBP16.86■□□□□ 0.29
SLC9A3R1-204ENST00000581356 ZNF790Q6PG37 636 aa16.86■□□□□ 0.29
SLC9A3R1-204ENST00000581356 VSIG10Q8N0Z9 540 aa16.86■□□□□ 0.29
SLC9A3R1-204ENST00000581356 CCDC87Q9NVE4 849 aa16.86■□□□□ 0.29
SLC9A3R1-204ENST00000581356 NEFMP07197 916 aa16.85■□□□□ 0.29
SLC9A3R1-204ENST00000581356 DCTN1Q14203 1278 aa16.85■□□□□ 0.29
SLC9A3R1-204ENST00000581356 ZNF496Q96IT1 587 aaPredicted RBP16.85■□□□□ 0.29
SLC9A3R1-204ENST00000581356 PLEKHF1Q96S99 279 aa16.85■□□□□ 0.29
SLC9A3R1-204ENST00000581356 MYBBP1AQ9BQG0 1328 aaKnown RBP16.85■□□□□ 0.29
SLC9A3R1-204ENST00000581356 CICQ96RK0 1608 aaPredicted RBP16.85■□□□□ 0.29
SLC9A3R1-204ENST00000581356 BTBD11A6QL63 1104 aa16.84■□□□□ 0.29
SLC9A3R1-204ENST00000581356 MMP10P09238 476 aa16.84■□□□□ 0.29
SLC9A3R1-204ENST00000581356 GYS1P13807 737 aa16.84■□□□□ 0.29
SLC9A3R1-204ENST00000581356 GPR162Q16538 588 aa16.84■□□□□ 0.29
SLC9A3R1-204ENST00000581356 NLGN1Q8N2Q7 840 aa16.84■□□□□ 0.29
SLC9A3R1-204ENST00000581356 CD2APQ9Y5K6 639 aa16.84■□□□□ 0.29
SLC9A3R1-204ENST00000581356 KCNQ3O43525 872 aa16.83■□□□□ 0.28
SLC9A3R1-204ENST00000581356 HTATSF1O43719 755 aaKnown RBP16.83■□□□□ 0.28
SLC9A3R1-204ENST00000581356 PELP1Q8IZL8 1130 aaKnown RBP16.83■□□□□ 0.28
SLC9A3R1-204ENST00000581356 SRP68Q9UHB9 627 aaKnown RBP16.83■□□□□ 0.28
SLC9A3R1-204ENST00000581356 SIPA1L3O60292 1781 aaPredicted RBP16.82■□□□□ 0.28
SLC9A3R1-204ENST00000581356 YY1P25490 414 aa16.82■□□□□ 0.28
SLC9A3R1-204ENST00000581356 PNNQ9H307 717 aaKnown RBP16.82■□□□□ 0.28
SLC9A3R1-204ENST00000581356 ZBTB1Q9Y2K1 713 aa16.82■□□□□ 0.28
SLC9A3R1-204ENST00000581356 UBR2Q8IWV8 1755 aa16.82■□□□□ 0.28
SLC9A3R1-204ENST00000581356 HEG1Q9ULI3 1381 aa16.81■□□□□ 0.28
SLC9A3R1-204ENST00000581356 SOS1Q07889 1333 aaPredicted RBP16.81■□□□□ 0.28
SLC9A3R1-204ENST00000581356 STARD3NLO95772 234 aa16.81■□□□□ 0.28
SLC9A3R1-204ENST00000581356 FMNL2Q96PY5 1086 aa16.81■□□□□ 0.28
SLC9A3R1-204ENST00000581356 USP42Q9H9J4 1324 aaKnown RBP16.8■□□□□ 0.28
SLC9A3R1-204ENST00000581356 MAPK8IP3Q9UPT6 1336 aa16.8■□□□□ 0.28
SLC9A3R1-204ENST00000581356 CANXP27824 592 aaKnown RBP16.8■□□□□ 0.28
SLC9A3R1-204ENST00000581356 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms