RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 ELL2O00472 640 aaPredicted RBP22.13■■□□□ 1.13
TMCO1-207ENST00000580248 ZBTB7BO15156 539 aaPredicted RBP22.13■■□□□ 1.13
TMCO1-207ENST00000580248 LARP1Q6PKG0 1096 aaKnown RBP22.13■■□□□ 1.13
TMCO1-207ENST00000580248 MCM10Q7L590 875 aa22.13■■□□□ 1.13
TMCO1-207ENST00000580248 SLIT2O94813 1529 aa22.12■■□□□ 1.13
TMCO1-207ENST00000580248 C8orf37Q96NL8 207 aa22.11■■□□□ 1.13
TMCO1-207ENST00000580248 CARD10Q9BWT7 1032 aa22.11■■□□□ 1.13
TMCO1-207ENST00000580248 NGLY1Q96IV0 654 aa22.11■■□□□ 1.13
TMCO1-207ENST00000580248 LRRC37A3O60309 1634 aa22.11■■□□□ 1.13
TMCO1-207ENST00000580248 NWD2Q9ULI1 1742 aa22.1■■□□□ 1.13
TMCO1-207ENST00000580248 BABAM1Q9NWV8 329 aa22.09■■□□□ 1.13
TMCO1-207ENST00000580248 PTPRCP08575 1304 aa22.09■■□□□ 1.13
TMCO1-207ENST00000580248 NRAPQ86VF7 1730 aa22.08■■□□□ 1.13
TMCO1-207ENST00000580248 MEX3CQ5U5Q3 659 aaKnown RBP22.08■■□□□ 1.12
TMCO1-207ENST00000580248 FNBP4Q8N3X1 1017 aaPredicted RBP22.08■■□□□ 1.12
TMCO1-207ENST00000580248 RAPGEF4Q8WZA2 1011 aa22.08■■□□□ 1.12
TMCO1-207ENST00000580248 SOS1Q07889 1333 aaPredicted RBP22.08■■□□□ 1.12
TMCO1-207ENST00000580248 GNAT3A8MTJ3 354 aa22.07■■□□□ 1.12
TMCO1-207ENST00000580248 GCC1Q96CN9 775 aa22.07■■□□□ 1.12
TMCO1-207ENST00000580248 INTS3Q68E01 1043 aaKnown RBP22.06■■□□□ 1.12
TMCO1-207ENST00000580248 UNC5CLQ8IV45 518 aa22.06■■□□□ 1.12
TMCO1-207ENST00000580248 TSPYL4Q9UJ04 414 aa22.06■■□□□ 1.12
TMCO1-207ENST00000580248 PLEKHG2Q9H7P9 1386 aa22.05■■□□□ 1.12
TMCO1-207ENST00000580248 TATP17735 454 aaPredicted RBP22.05■■□□□ 1.12
TMCO1-207ENST00000580248 AMOTQ4VCS5 1084 aa22.05■■□□□ 1.12
TMCO1-207ENST00000580248 PLEKHO1Q53GL0 409 aaPredicted RBP22.05■■□□□ 1.12
TMCO1-207ENST00000580248 BCL9LQ86UU0 1499 aa22.04■■□□□ 1.12
TMCO1-207ENST00000580248 MAP3K5Q99683 1374 aa22.04■■□□□ 1.12
TMCO1-207ENST00000580248 NUCB1Q02818 461 aa22.04■■□□□ 1.12
TMCO1-207ENST00000580248 USP35Q9P2H5 1018 aa22.03■■□□□ 1.12
TMCO1-207ENST00000580248 MEGF6O75095 1541 aa22.03■■□□□ 1.12
TMCO1-207ENST00000580248 UPF2Q9HAU5 1272 aaKnown RBP22.03■■□□□ 1.12
TMCO1-207ENST00000580248 DAXXQ9UER7 740 aaPredicted RBP22.03■■□□□ 1.12
TMCO1-207ENST00000580248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.02■■□□□ 1.127e-7■■■□□ 19
TMCO1-207ENST00000580248 USP21Q9UK80 565 aa22.02■■□□□ 1.12
TMCO1-207ENST00000580248 IL2RBP14784 551 aa22.01■■□□□ 1.11
TMCO1-207ENST00000580248 SPATA31A1Q5TZJ5 1347 aa22.01■■□□□ 1.11
TMCO1-207ENST00000580248 RGS12O14924 1447 aa22■■□□□ 1.11
TMCO1-207ENST00000580248 SPATA31A5Q5VU36 1347 aa22■■□□□ 1.11
TMCO1-207ENST00000580248 SPATA31A7Q8IWB4 1347 aa22■■□□□ 1.11
TMCO1-207ENST00000580248 VPS72Q15906 364 aa22■■□□□ 1.11
TMCO1-207ENST00000580248 CHD1LQ86WJ1 897 aa22■■□□□ 1.11
TMCO1-207ENST00000580248 SPG7Q9UQ90 795 aa22■■□□□ 1.11
TMCO1-207ENST00000580248 THRAP3Q9Y2W1 955 aaKnown RBP22■■□□□ 1.11
TMCO1-207ENST00000580248 OVOS2A0A0G2JMS6 1433 aa21.99■■□□□ 1.11
TMCO1-207ENST00000580248 AFF2P51816 1311 aa21.98■■□□□ 1.11
TMCO1-207ENST00000580248 KRT24Q2M2I5 525 aa21.98■■□□□ 1.11
TMCO1-207ENST00000580248 ZNF530Q6P9A1 599 aaPredicted RBP21.98■■□□□ 1.11
TMCO1-207ENST00000580248 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.98■■□□□ 1.11
TMCO1-207ENST00000580248 PARP4Q9UKK3 1724 aaKnown RBP21.98■■□□□ 1.11
TMCO1-207ENST00000580248 TAF7Q15545 349 aaPredicted RBP21.97■■□□□ 1.11
TMCO1-207ENST00000580248 CCDC9Q9Y3X0 531 aaKnown RBP21.97■■□□□ 1.11
TMCO1-207ENST00000580248 CACNA1FO60840 1977 aa21.97■■□□□ 1.11
TMCO1-207ENST00000580248 SLC4A2P04920 1241 aa21.97■■□□□ 1.11
TMCO1-207ENST00000580248 AKAP4Q5JQC9 854 aa21.96■■□□□ 1.11
TMCO1-207ENST00000580248 DISP2A7MBM2 1401 aa21.96■■□□□ 1.11
TMCO1-207ENST00000580248 C1orf141Q5JVX7 400 aa21.95■■□□□ 1.1
TMCO1-207ENST00000580248 RPAP2Q8IXW5 612 aaPredicted RBP21.95■■□□□ 1.1
TMCO1-207ENST00000580248 ZCRB1Q8TBF4 217 aaKnown RBP21.95■■□□□ 1.1
TMCO1-207ENST00000580248 STK31Q9BXU1 1019 aa21.95■■□□□ 1.1
TMCO1-207ENST00000580248 PKD1L3Q7Z443 1732 aa21.95■■□□□ 1.1
TMCO1-207ENST00000580248 SEC24BO95487 1268 aa21.94■■□□□ 1.1
TMCO1-207ENST00000580248 CCDC30Q5VVM6 783 aa21.94■■□□□ 1.1
TMCO1-207ENST00000580248 IL17REQ8NFR9 667 aa21.94■■□□□ 1.1
TMCO1-207ENST00000580248 CDCA7Q9BWT1 371 aaPredicted RBP21.94■■□□□ 1.1
TMCO1-207ENST00000580248 CHMP4AQ9BY43 222 aa21.94■■□□□ 1.1
TMCO1-207ENST00000580248 MIS18AQ9NYP9 233 aa21.94■■□□□ 1.1
TMCO1-207ENST00000580248 BARGINQ6ZT62 677 aa21.94■■□□□ 1.1
TMCO1-207ENST00000580248 CEMIPQ8WUJ3 1361 aa21.93■■□□□ 1.1
TMCO1-207ENST00000580248 CCT4P50991 539 aaKnown RBP21.93■■□□□ 1.1
TMCO1-207ENST00000580248 SIRT2Q8IXJ6 389 aa21.93■■□□□ 1.1
TMCO1-207ENST00000580248 IFNL2Q8IZJ0 200 aa21.92■■□□□ 1.1
TMCO1-207ENST00000580248 C1orf115Q9H7X2 142 aa21.92■■□□□ 1.1
TMCO1-207ENST00000580248 PHKG2P15735 406 aa21.92■■□□□ 1.1
TMCO1-207ENST00000580248 ANKRD45Q5TZF3 282 aa21.92■■□□□ 1.1
TMCO1-207ENST00000580248 ANKRD44Q8N8A2 993 aa21.92■■□□□ 1.1
TMCO1-207ENST00000580248 TBC1D32Q96NH3 1257 aa21.92■■□□□ 1.1
TMCO1-207ENST00000580248 WNK3Q9BYP7 1800 aa21.91■■□□□ 1.1
TMCO1-207ENST00000580248 LNPKQ9C0E8 428 aa21.91■■□□□ 1.1
TMCO1-207ENST00000580248 TRPC5Q9UL62 973 aaPredicted RBP21.91■■□□□ 1.1
TMCO1-207ENST00000580248 PCDH11XQ9BZA7 1347 aa21.91■■□□□ 1.1
TMCO1-207ENST00000580248 PCDH11YQ9BZA8 1340 aa21.91■■□□□ 1.1
TMCO1-207ENST00000580248 CYP27B1O15528 508 aa21.9■■□□□ 1.1
TMCO1-207ENST00000580248 BECN1Q14457 450 aa21.9■■□□□ 1.1
TMCO1-207ENST00000580248 DCTPP1Q9H773 170 aa21.9■■□□□ 1.1
TMCO1-207ENST00000580248 ATRNO75882 1429 aa21.9■■□□□ 1.1
TMCO1-207ENST00000580248 BMP2KLQ5H9B9 411 aa21.89■■□□□ 1.1
TMCO1-207ENST00000580248 EXOC5O00471 708 aa21.89■■□□□ 1.09
TMCO1-207ENST00000580248 GJD4Q96KN9 370 aaPredicted RBP21.89■■□□□ 1.09
TMCO1-207ENST00000580248 MPRIPQ6WCQ1 1025 aa21.88■■□□□ 1.09
TMCO1-207ENST00000580248 LGR6Q9HBX8 967 aa21.88■■□□□ 1.09
TMCO1-207ENST00000580248 ATP10DQ9P241 1426 aa21.88■■□□□ 1.09
TMCO1-207ENST00000580248 HSP90AB1P08238 724 aaKnown RBP21.87■■□□□ 1.09
TMCO1-207ENST00000580248 HOXB7P09629 217 aa21.87■■□□□ 1.09
TMCO1-207ENST00000580248 N4BP2Q86UW6 1770 aaPredicted RBP21.87■■□□□ 1.09
TMCO1-207ENST00000580248 RNMTO43148 476 aaKnown RBP21.86■■□□□ 1.09
TMCO1-207ENST00000580248 EIF5BO60841 1220 aaKnown RBP21.86■■□□□ 1.09
TMCO1-207ENST00000580248 FAM98CQ17RN3 349 aaKnown RBP21.86■■□□□ 1.09
TMCO1-207ENST00000580248 KDM3BQ7LBC6 1761 aa21.86■■□□□ 1.09
TMCO1-207ENST00000580248 DDX54Q8TDD1 881 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms