RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 DDX17Q92841 729 aaKnown RBP9.74□□□□□ -0.85
RNF43-204ENST00000580014 ROBO1Q9Y6N7 1651 aa9.74□□□□□ -0.85
RNF43-204ENST00000580014 OVOS2A0A0J9YW53 1432 aa9.73□□□□□ -0.85
RNF43-204ENST00000580014 OVOS2Q6IE36 1432 aa9.73□□□□□ -0.85
RNF43-204ENST00000580014 TRPM3Q9HCF6 1732 aaPredicted RBP9.73□□□□□ -0.85
RNF43-204ENST00000580014 PPP4R3BQ5MIZ7 849 aa9.73□□□□□ -0.85
RNF43-204ENST00000580014 NME9Q86XW9 330 aa9.73□□□□□ -0.85
RNF43-204ENST00000580014 USP19O94966 1318 aa9.73□□□□□ -0.85
RNF43-204ENST00000580014 PARD3Q8TEW0 1356 aa9.73□□□□□ -0.85
RNF43-204ENST00000580014 TNS3Q68CZ2 1445 aa9.73□□□□□ -0.85
RNF43-204ENST00000580014 SSTR3P32745 418 aaPredicted RBP9.72□□□□□ -0.85
RNF43-204ENST00000580014 RALBP1Q15311 655 aa9.72□□□□□ -0.85
RNF43-204ENST00000580014 DIEXFQ68CQ4 756 aaKnown RBP9.72□□□□□ -0.85
RNF43-204ENST00000580014 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.72□□□□□ -0.85
RNF43-204ENST00000580014 LRRC59Q96AG4 307 aaKnown RBP9.72□□□□□ -0.85
RNF43-204ENST00000580014 CDCA7LQ96GN5 454 aa9.72□□□□□ -0.85
RNF43-204ENST00000580014 PRKRIP1Q9H875 184 aaPredicted RBP9.72□□□□□ -0.85
RNF43-204ENST00000580014 ARHGEF10O15013 1369 aa9.72□□□□□ -0.85
RNF43-204ENST00000580014 USP54Q70EL1 1684 aa9.71□□□□□ -0.85
RNF43-204ENST00000580014 SNPHO15079 494 aa9.71□□□□□ -0.86
RNF43-204ENST00000580014 PIP4K2BP78356 416 aa9.71□□□□□ -0.86
RNF43-204ENST00000580014 XPCQ01831 940 aaPredicted RBP9.71□□□□□ -0.86
RNF43-204ENST00000580014 NLRP13Q86W25 1043 aa9.71□□□□□ -0.86
RNF43-204ENST00000580014 BCL2L12Q9HB09 334 aa9.71□□□□□ -0.86
RNF43-204ENST00000580014 PLSCR2Q9NRY7 297 aa9.71□□□□□ -0.86
RNF43-204ENST00000580014 AATKQ6ZMQ8 1374 aa9.71□□□□□ -0.86
RNF43-204ENST00000580014 ALS2Q96Q42 1657 aa9.71□□□□□ -0.86
RNF43-204ENST00000580014 SH3D19Q5HYK7 790 aa9.7□□□□□ -0.86
RNF43-204ENST00000580014 ABTB2Q8N961 1025 aa9.7□□□□□ -0.86
RNF43-204ENST00000580014 COG3Q96JB2 828 aa9.7□□□□□ -0.86
RNF43-204ENST00000580014 GGNBP2Q9H3C7 697 aa9.7□□□□□ -0.86
RNF43-204ENST00000580014 FAM217BQ9NTX9 383 aaPredicted RBP9.7□□□□□ -0.86
RNF43-204ENST00000580014 MED1Q15648 1581 aaPredicted RBP9.7□□□□□ -0.86
RNF43-204ENST00000580014 COL16A1Q07092 1604 aaPredicted RBP9.7□□□□□ -0.86
RNF43-204ENST00000580014 PIK3C2AO00443 1686 aa9.69□□□□□ -0.86
RNF43-204ENST00000580014 SLIT3O75094 1523 aa9.69□□□□□ -0.86
RNF43-204ENST00000580014 PNPLA6Q8IY17 1366 aa9.69□□□□□ -0.86
RNF43-204ENST00000580014 RBM46Q8TBY0 533 aaKnown RBP9.69□□□□□ -0.86
RNF43-204ENST00000580014 PCMTD1Q96MG8 357 aaPredicted RBP9.69□□□□□ -0.86
RNF43-204ENST00000580014 INSRP06213 1382 aa9.68□□□□□ -0.86
RNF43-204ENST00000580014 PPP1R3GB7ZBB8 358 aa9.68□□□□□ -0.86
RNF43-204ENST00000580014 HOXB1P14653 301 aaPredicted RBP9.68□□□□□ -0.86
RNF43-204ENST00000580014 COL9A1P20849 921 aa9.68□□□□□ -0.86
RNF43-204ENST00000580014 CC2D1BQ5T0F9 858 aaKnown RBP9.68□□□□□ -0.86
RNF43-204ENST00000580014 MORC1Q86VD1 984 aa9.68□□□□□ -0.86
RNF43-204ENST00000580014 FBXO41Q8TF61 875 aa9.68□□□□□ -0.86
RNF43-204ENST00000580014 NLRP7Q8WX94 980 aa9.68□□□□□ -0.86
RNF43-204ENST00000580014 SMG6Q86US8 1419 aaKnown RBP9.67□□□□□ -0.86
RNF43-204ENST00000580014 ANP32CO43423 234 aa9.67□□□□□ -0.86
RNF43-204ENST00000580014 GCP02774 474 aa9.67□□□□□ -0.86
RNF43-204ENST00000580014 PTPREP23469 700 aa9.67□□□□□ -0.86
RNF43-204ENST00000580014 KCNH5Q8NCM2 988 aa9.67□□□□□ -0.86
RNF43-204ENST00000580014 BEGAINQ9BUH8 593 aa9.67□□□□□ -0.86
RNF43-204ENST00000580014 RSPH6AQ9H0K4 717 aa9.67□□□□□ -0.86
RNF43-204ENST00000580014 FAM198AQ9UFP1 575 aa9.67□□□□□ -0.86
RNF43-204ENST00000580014 CPDO75976 1380 aa9.66□□□□□ -0.86
RNF43-204ENST00000580014 KIF24Q5T7B8 1368 aa9.66□□□□□ -0.86
RNF43-204ENST00000580014 MYBBP1AQ9BQG0 1328 aaKnown RBP9.66□□□□□ -0.86
RNF43-204ENST00000580014 MARF1Q9Y4F3 1742 aaKnown RBP9.66□□□□□ -0.86
RNF43-204ENST00000580014 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.66□□□□□ -0.86
RNF43-204ENST00000580014 PPP2R1AP30153 589 aa9.66□□□□□ -0.86
RNF43-204ENST00000580014 HSPA1LP34931 641 aa9.66□□□□□ -0.86
RNF43-204ENST00000580014 POLKQ9UBT6 870 aa9.66□□□□□ -0.86
RNF43-204ENST00000580014 COL22A1Q8NFW1 1626 aaPredicted RBP9.66□□□□□ -0.86
RNF43-204ENST00000580014 NFAT5O94916 1531 aa9.66□□□□□ -0.86
RNF43-204ENST00000580014 ANKRD26Q9UPS8 1709 aa9.65□□□□□ -0.86
RNF43-204ENST00000580014 JCADQ9P266 1359 aa9.65□□□□□ -0.86
RNF43-204ENST00000580014 NUTM2GQ5VZR2 741 aa9.65□□□□□ -0.86
RNF43-204ENST00000580014 ARHGEF25Q86VW2 580 aa9.65□□□□□ -0.86
RNF43-204ENST00000580014 KIF20BQ96Q89 1820 aa9.65□□□□□ -0.86
RNF43-204ENST00000580014 PHLPP1O60346 1717 aa9.65□□□□□ -0.87
RNF43-204ENST00000580014 CCER2I3L3R5 266 aa9.64□□□□□ -0.87
RNF43-204ENST00000580014 SKIV2LQ15477 1246 aaKnown RBP9.64□□□□□ -0.87
RNF43-204ENST00000580014 ZMYND15Q9H091 742 aa9.64□□□□□ -0.87
RNF43-204ENST00000580014 CRYBG1Q9Y4K1 1723 aa9.64□□□□□ -0.87
RNF43-204ENST00000580014 MAP3K19Q56UN5 1328 aa9.63□□□□□ -0.87
RNF43-204ENST00000580014 SPATA31A6Q5VVP1 1343 aa9.63□□□□□ -0.87
RNF43-204ENST00000580014 FBLN1P23142 703 aa9.63□□□□□ -0.87
RNF43-204ENST00000580014 FLIIQ13045 1269 aa9.63□□□□□ -0.87
RNF43-204ENST00000580014 EYA1Q99502 592 aa9.63□□□□□ -0.87
RNF43-204ENST00000580014 TSKSQ9UJT2 592 aa9.63□□□□□ -0.87
RNF43-204ENST00000580014 RTL1A6NKG5 1358 aa9.63□□□□□ -0.87
RNF43-204ENST00000580014 RCCD1A6NED2 376 aa9.62□□□□□ -0.87
RNF43-204ENST00000580014 MTHFSP49914 203 aa9.62□□□□□ -0.87
RNF43-204ENST00000580014 CABLES1Q8TDN4 633 aa9.62□□□□□ -0.87
RNF43-204ENST00000580014 IP6K1Q92551 441 aa9.62□□□□□ -0.87
RNF43-204ENST00000580014 EMILIN1Q9Y6C2 1016 aa9.62□□□□□ -0.87
RNF43-204ENST00000580014 ABCC6O95255 1503 aa9.61□□□□□ -0.87
RNF43-204ENST00000580014 SHPRHQ149N8 1683 aa9.61□□□□□ -0.87
RNF43-204ENST00000580014 PHRF1Q9P1Y6 1649 aaKnown RBP9.61□□□□□ -0.87
RNF43-204ENST00000580014 TRIM6-TRIM34B2RNG4 842 aa9.61□□□□□ -0.87
RNF43-204ENST00000580014 NBPF26B4DH59 902 aa9.61□□□□□ -0.87
RNF43-204ENST00000580014 COL3A1P02461 1466 aaPredicted RBP9.6□□□□□ -0.87
RNF43-204ENST00000580014 CDK12Q9NYV4 1490 aaPredicted RBP9.6□□□□□ -0.87
RNF43-204ENST00000580014 ONECUT3O60422 494 aaPredicted RBP9.6□□□□□ -0.87
RNF43-204ENST00000580014 TNNT2P45379 298 aaPredicted RBP9.6□□□□□ -0.87
RNF43-204ENST00000580014 RRS1Q15050 365 aaKnown RBP9.6□□□□□ -0.87
RNF43-204ENST00000580014 NUDT18Q6ZVK8 323 aa9.6□□□□□ -0.87
RNF43-204ENST00000580014 FLT4P35916 1363 aa9.6□□□□□ -0.87
RNF43-204ENST00000580014 KIAA0232Q92628 1395 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms