RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 C5P01031 1676 aa31.93■■■□□ 2.7
LIMD2-207ENST00000579329 RNMTO43148 476 aaKnown RBP31.92■■■□□ 2.7
LIMD2-207ENST00000579329 ADAMTS7Q9UKP4 1686 aa31.92■■■□□ 2.7
LIMD2-207ENST00000579329 LOC102724428A0A0B4J2F2 783 aa31.91■■■□□ 2.7
LIMD2-207ENST00000579329 SIK1P57059 783 aa31.91■■■□□ 2.7
LIMD2-207ENST00000579329 MAP3K5Q99683 1374 aa31.91■■■□□ 2.7
LIMD2-207ENST00000579329 MRC1P22897 1456 aa31.91■■■□□ 2.7
LIMD2-207ENST00000579329 QSER1Q2KHR3 1735 aa31.9■■■□□ 2.7
LIMD2-207ENST00000579329 NFATC2IPQ8NCF5 419 aa31.9■■■□□ 2.7
LIMD2-207ENST00000579329 LGR6Q9HBX8 967 aa31.9■■■□□ 2.7
LIMD2-207ENST00000579329 UTRNP46939 3433 aa31.9■■■□□ 2.7
LIMD2-207ENST00000579329 TAF1LQ8IZX4 1826 aa31.89■■■□□ 2.7
LIMD2-207ENST00000579329 CHD4Q14839 1912 aa31.89■■■□□ 2.7
LIMD2-207ENST00000579329 PHACTR3Q96KR7 559 aa31.89■■■□□ 2.7
LIMD2-207ENST00000579329 PRKRIP1Q9H875 184 aaPredicted RBP31.88■■■□□ 2.69
LIMD2-207ENST00000579329 SLC52A2Q9HAB3 445 aa31.88■■■□□ 2.69
LIMD2-207ENST00000579329 TFCP2L1Q9NZI6 479 aa31.88■■■□□ 2.69
LIMD2-207ENST00000579329 VIRMAQ69YN4 1812 aaKnown RBP31.88■■■□□ 2.69
LIMD2-207ENST00000579329 GNAT3A8MTJ3 354 aa31.87■■■□□ 2.69
LIMD2-207ENST00000579329 TUBGCP6Q96RT7 1819 aa31.85■■■□□ 2.69
LIMD2-207ENST00000579329 C4BP0C0L5 1744 aa31.84■■■□□ 2.69
LIMD2-207ENST00000579329 PNPLA7Q6ZV29 1317 aa31.84■■■□□ 2.69
LIMD2-207ENST00000579329 ATP6V1AP38606 617 aa31.84■■■□□ 2.69
LIMD2-207ENST00000579329 RBM42Q9BTD8 480 aaKnown RBP31.84■■■□□ 2.69
LIMD2-207ENST00000579329 NEFMP07197 916 aa31.83■■■□□ 2.69
LIMD2-207ENST00000579329 FHDC1Q9C0D6 1143 aaPredicted RBP31.83■■■□□ 2.69
LIMD2-207ENST00000579329 ZNF831Q5JPB2 1677 aa31.83■■■□□ 2.69
LIMD2-207ENST00000579329 SYT17Q9BSW7 474 aa31.82■■■□□ 2.68
LIMD2-207ENST00000579329 ITPK1Q13572 414 aa31.81■■■□□ 2.68
LIMD2-207ENST00000579329 MTFR1LQ9H019 292 aa31.81■■■□□ 2.68
LIMD2-207ENST00000579329 LINC00116Q8NCU8 138 aa31.8■■■□□ 2.68
LIMD2-207ENST00000579329 AK7Q96M32 723 aa31.8■■■□□ 2.68
LIMD2-207ENST00000579329 PNNQ9H307 717 aaKnown RBP31.8■■■□□ 2.68
LIMD2-207ENST00000579329 IL17REQ8NFR9 667 aa31.79■■■□□ 2.68
LIMD2-207ENST00000579329 SGIP1Q9BQI5 828 aa31.79■■■□□ 2.68
LIMD2-207ENST00000579329 TEFQ10587 303 aa31.78■■■□□ 2.68
LIMD2-207ENST00000579329 ZNF784Q8NCA9 323 aaPredicted RBP31.78■■■□□ 2.68
LIMD2-207ENST00000579329 SLC16A10Q8TF71 515 aa31.78■■■□□ 2.68
LIMD2-207ENST00000579329 SLC4A9Q96Q91 983 aa31.78■■■□□ 2.68
LIMD2-207ENST00000579329 PTCD1O75127 700 aaKnown RBP31.77■■■□□ 2.68
LIMD2-207ENST00000579329 PLEKHF1Q96S99 279 aa31.76■■■□□ 2.67
LIMD2-207ENST00000579329 CEMIPQ8WUJ3 1361 aa31.76■■■□□ 2.67
LIMD2-207ENST00000579329 FLAD1Q8NFF5 587 aa31.75■■■□□ 2.67
LIMD2-207ENST00000579329 RTF1Q92541 710 aaKnown RBP31.75■■■□□ 2.67
LIMD2-207ENST00000579329 MAPK8IP3Q9UPT6 1336 aa31.74■■■□□ 2.67
LIMD2-207ENST00000579329 COL23A1Q86Y22 540 aaPredicted RBP31.73■■■□□ 2.67
LIMD2-207ENST00000579329 COL5A3P25940 1745 aaPredicted RBP31.72■■■□□ 2.67
LIMD2-207ENST00000579329 UBR3Q6ZT12 1888 aa31.72■■■□□ 2.67
LIMD2-207ENST00000579329 CICQ96RK0 1608 aaPredicted RBP31.72■■■□□ 2.67
LIMD2-207ENST00000579329 SIPA1L3O60292 1781 aaPredicted RBP31.72■■■□□ 2.67
LIMD2-207ENST00000579329 MSH5O43196 834 aa31.72■■■□□ 2.67
LIMD2-207ENST00000579329 HTATSF1O43719 755 aaKnown RBP31.72■■■□□ 2.67
LIMD2-207ENST00000579329 SLC39A6Q13433 755 aa31.72■■■□□ 2.67
LIMD2-207ENST00000579329 WDR43Q15061 677 aaKnown RBP eCLIP31.7■■■□□ 2.67
LIMD2-207ENST00000579329 ARXQ96QS3 562 aa31.7■■■□□ 2.67
LIMD2-207ENST00000579329 KCPQ6ZWJ8 1503 aa31.7■■■□□ 2.66
LIMD2-207ENST00000579329 TJP1Q07157 1748 aa31.69■■■□□ 2.66
LIMD2-207ENST00000579329 GNPATO15228 680 aa31.69■■■□□ 2.66
LIMD2-207ENST00000579329 SSFA2P28290 1259 aa31.69■■■□□ 2.66
LIMD2-207ENST00000579329 CNTNAP4Q9C0A0 1308 aa31.69■■■□□ 2.66
LIMD2-207ENST00000579329 NFE2L2Q16236 605 aa31.68■■■□□ 2.66
LIMD2-207ENST00000579329 RC3H1Q5TC82 1133 aaKnown RBP31.68■■■□□ 2.66
LIMD2-207ENST00000579329 TTC5Q8N0Z6 440 aa31.68■■■□□ 2.66
LIMD2-207ENST00000579329 UBR2Q8IWV8 1755 aa31.67■■■□□ 2.66
LIMD2-207ENST00000579329 PHF14O94880 888 aa31.67■■■□□ 2.66
LIMD2-207ENST00000579329 MCM10Q7L590 875 aa31.67■■■□□ 2.66
LIMD2-207ENST00000579329 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.66■■■□□ 2.66
LIMD2-207ENST00000579329 AMIGO3Q86WK7 504 aa31.66■■■□□ 2.66
LIMD2-207ENST00000579329 DLG5Q8TDM6 1919 aa31.65■■■□□ 2.66
LIMD2-207ENST00000579329 COL24A1Q17RW2 1714 aa31.64■■■□□ 2.66
LIMD2-207ENST00000579329 DCTN1Q14203 1278 aa31.64■■■□□ 2.66
LIMD2-207ENST00000579329 ZNF790Q6PG37 636 aa31.63■■■□□ 2.65
LIMD2-207ENST00000579329 VSIG10Q8N0Z9 540 aa31.63■■■□□ 2.65
LIMD2-207ENST00000579329 RTCBQ9Y3I0 505 aaKnown RBP31.63■■■□□ 2.65
LIMD2-207ENST00000579329 BTBD11A6QL63 1104 aa31.62■■■□□ 2.65
LIMD2-207ENST00000579329 ANP32CO43423 234 aa31.62■■■□□ 2.65
LIMD2-207ENST00000579329 POLD1P28340 1107 aa31.62■■■□□ 2.65
LIMD2-207ENST00000579329 SMIM5Q71RC9 77 aa31.62■■■□□ 2.65
LIMD2-207ENST00000579329 DNAJC10Q8IXB1 793 aa31.62■■■□□ 2.65
LIMD2-207ENST00000579329 CRKLP46109 303 aaKnown RBP31.61■■■□□ 2.65
LIMD2-207ENST00000579329 RPS6KA4O75676 772 aa31.6■■■□□ 2.65
LIMD2-207ENST00000579329 MYH14Q7Z406 1995 aaKnown RBP31.58■■■□□ 2.65
LIMD2-207ENST00000579329 ADRA2BP18089 450 aa31.58■■■□□ 2.65
LIMD2-207ENST00000579329 ZNF496Q96IT1 587 aaPredicted RBP31.58■■■□□ 2.65
LIMD2-207ENST00000579329 ADAMTS8Q9UP79 889 aa31.58■■■□□ 2.65
LIMD2-207ENST00000579329 HEG1Q9ULI3 1381 aa31.57■■■□□ 2.64
LIMD2-207ENST00000579329 TRAPPC3LQ5T215 181 aa31.57■■■□□ 2.64
LIMD2-207ENST00000579329 MSL1Q68DK7 614 aa31.57■■■□□ 2.64
LIMD2-207ENST00000579329 CCDC146Q8IYE0 955 aa31.57■■■□□ 2.64
LIMD2-207ENST00000579329 RUNDC1Q96C34 613 aa31.57■■■□□ 2.64
LIMD2-207ENST00000579329 FMNL2Q96PY5 1086 aa31.57■■■□□ 2.64
LIMD2-207ENST00000579329 CYP19A1P11511 503 aaPredicted RBP31.56■■■□□ 2.64
LIMD2-207ENST00000579329 CCDC87Q9NVE4 849 aa31.56■■■□□ 2.64
LIMD2-207ENST00000579329 TAF7Q15545 349 aaPredicted RBP31.55■■■□□ 2.64
LIMD2-207ENST00000579329 TMPOP42166 694 aaKnown RBP31.54■■■□□ 2.64
LIMD2-207ENST00000579329 RIPK4P57078 832 aa31.54■■■□□ 2.64
LIMD2-207ENST00000579329 GPR162Q16538 588 aa31.54■■■□□ 2.64
LIMD2-207ENST00000579329 INTS5Q6P9B9 1019 aaKnown RBP31.54■■■□□ 2.64
LIMD2-207ENST00000579329 KLHL34Q8N239 644 aa31.54■■■□□ 2.64
LIMD2-207ENST00000579329 KCNQ3O43525 872 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms