RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 NME9Q86XW9 330 aa12.6□□□□□ -0.39
SNX11-205ENST00000578861 KTN1Q86UP2 1357 aaKnown RBP12.59□□□□□ -0.39
SNX11-205ENST00000578861 C5P01031 1676 aa12.59□□□□□ -0.39
SNX11-205ENST00000578861 TSKSQ9UJT2 592 aa12.59□□□□□ -0.39
SNX11-205ENST00000578861 USP54Q70EL1 1684 aa12.58□□□□□ -0.4
SNX11-205ENST00000578861 LOC102724428A0A0B4J2F2 783 aa12.58□□□□□ -0.4
SNX11-205ENST00000578861 SIK1P57059 783 aa12.58□□□□□ -0.4
SNX11-205ENST00000578861 GRM1Q13255 1194 aa12.58□□□□□ -0.4
SNX11-205ENST00000578861 DEFB115Q30KQ5 88 aa12.58□□□□□ -0.4
SNX11-205ENST00000578861 IP6K1Q92551 441 aa12.58□□□□□ -0.4
SNX11-205ENST00000578861 MCOLN1Q9GZU1 580 aa12.58□□□□□ -0.4
SNX11-205ENST00000578861 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
SNX11-205ENST00000578861 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
SNX11-205ENST00000578861 PKD1L3Q7Z443 1732 aa12.57□□□□□ -0.4
SNX11-205ENST00000578861 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
SNX11-205ENST00000578861 USHBP1Q8N6Y0 703 aa12.57□□□□□ -0.4
SNX11-205ENST00000578861 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
SNX11-205ENST00000578861 RTCBQ9Y3I0 505 aaKnown RBP12.57□□□□□ -0.4
SNX11-205ENST00000578861 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
SNX11-205ENST00000578861 RFC4P35249 363 aa12.56□□□□□ -0.4
SNX11-205ENST00000578861 ITPK1Q13572 414 aa12.56□□□□□ -0.4
SNX11-205ENST00000578861 PRPF38BQ5VTL8 546 aaKnown RBP12.56□□□□□ -0.4
SNX11-205ENST00000578861 PAXIP1Q6ZW49 1069 aaPredicted RBP12.56□□□□□ -0.4
SNX11-205ENST00000578861 PIGBQ92521 554 aa12.56□□□□□ -0.4
SNX11-205ENST00000578861 WDR33Q9C0J8 1336 aaKnown RBP12.56□□□□□ -0.4
SNX11-205ENST00000578861 GYS1P13807 737 aa12.55□□□□□ -0.4
SNX11-205ENST00000578861 ARHGEF1Q92888 912 aaKnown RBP12.55□□□□□ -0.4
SNX11-205ENST00000578861 ABT1Q9ULW3 272 aaKnown RBP12.55□□□□□ -0.4
SNX11-205ENST00000578861 PDE4DIPQ5VU43 2346 aa12.55□□□□□ -0.4
SNX11-205ENST00000578861 SOX10P56693 466 aa12.54□□□□□ -0.4
SNX11-205ENST00000578861 DGKZQ13574 1117 aa12.54□□□□□ -0.4
SNX11-205ENST00000578861 PASKQ96RG2 1323 aa12.54□□□□□ -0.4
SNX11-205ENST00000578861 MON2Q7Z3U7 1717 aa12.54□□□□□ -0.4
SNX11-205ENST00000578861 MEGF6O75095 1541 aa12.53□□□□□ -0.4
SNX11-205ENST00000578861 TATP17735 454 aaPredicted RBP12.53□□□□□ -0.4
SNX11-205ENST00000578861 AMPHP49418 695 aa12.53□□□□□ -0.4
SNX11-205ENST00000578861 CLEC11AQ9Y240 323 aa12.53□□□□□ -0.4
SNX11-205ENST00000578861 LTN1O94822 1766 aa12.53□□□□□ -0.4
SNX11-205ENST00000578861 KIAA1551Q9HCM1 1747 aa12.52□□□□□ -0.41
SNX11-205ENST00000578861 TOGARAM1Q9Y4F4 1720 aa12.52□□□□□ -0.41
SNX11-205ENST00000578861 DDNO94850 711 aaPredicted RBP12.52□□□□□ -0.41
SNX11-205ENST00000578861 ERFEQ4G0M1 354 aa12.52□□□□□ -0.41
SNX11-205ENST00000578861 EAPPQ56P03 285 aaPredicted RBP12.52□□□□□ -0.41
SNX11-205ENST00000578861 ASAP1Q9ULH1 1129 aa12.52□□□□□ -0.41
SNX11-205ENST00000578861 PCDH11XQ9BZA7 1347 aa12.52□□□□□ -0.41
SNX11-205ENST00000578861 PCDH11YQ9BZA8 1340 aa12.52□□□□□ -0.41
SNX11-205ENST00000578861 RASSF10A6NK89 507 aa12.51□□□□□ -0.41
SNX11-205ENST00000578861 NBPF6Q5VWK0 638 aa12.51□□□□□ -0.41
SNX11-205ENST00000578861 LDHDQ86WU2 507 aa12.51□□□□□ -0.41
SNX11-205ENST00000578861 NBPF4Q96M43 638 aa12.51□□□□□ -0.41
SNX11-205ENST00000578861 USP31Q70CQ4 1352 aa12.51□□□□□ -0.41
SNX11-205ENST00000578861 TNRC18O15417 2968 aaPredicted RBP12.51□□□□□ -0.41
SNX11-205ENST00000578861 TMC1Q8TDI8 760 aa12.5□□□□□ -0.41
SNX11-205ENST00000578861 UBR3Q6ZT12 1888 aa12.49□□□□□ -0.41
SNX11-205ENST00000578861 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
SNX11-205ENST00000578861 CGNL1Q0VF96 1302 aa12.49□□□□□ -0.41
SNX11-205ENST00000578861 CYP27B1O15528 508 aa12.49□□□□□ -0.41
SNX11-205ENST00000578861 ITGBL1O95965 494 aaPredicted RBP12.49□□□□□ -0.41
SNX11-205ENST00000578861 FBLN1P23142 703 aa12.49□□□□□ -0.41
SNX11-205ENST00000578861 HOXC9P31274 260 aa12.49□□□□□ -0.41
SNX11-205ENST00000578861 GPR101Q96P66 508 aaPredicted RBP12.49□□□□□ -0.41
SNX11-205ENST00000578861 TMOD3Q9NYL9 352 aa12.49□□□□□ -0.41
SNX11-205ENST00000578861 KIF13BQ9NQT8 1826 aa12.48□□□□□ -0.41
SNX11-205ENST00000578861 NFKBIEO00221 500 aa12.48□□□□□ -0.41
SNX11-205ENST00000578861 DDR1Q08345 913 aa12.48□□□□□ -0.41
SNX11-205ENST00000578861 FKBP8Q14318 412 aa12.48□□□□□ -0.41
SNX11-205ENST00000578861 TTLL6Q8N841 843 aa12.48□□□□□ -0.41
SNX11-205ENST00000578861 CAPNS2Q96L46 248 aa12.48□□□□□ -0.41
SNX11-205ENST00000578861 RBM42Q9BTD8 480 aaKnown RBP12.48□□□□□ -0.41
SNX11-205ENST00000578861 CARD11Q9BXL7 1154 aa12.48□□□□□ -0.41
SNX11-205ENST00000578861 SRP68Q9UHB9 627 aaKnown RBP12.48□□□□□ -0.41
SNX11-205ENST00000578861 TAF1LQ8IZX4 1826 aa12.47□□□□□ -0.41
SNX11-205ENST00000578861 IQCA1LA6NCM1 817 aa12.47□□□□□ -0.41
SNX11-205ENST00000578861 ADRA2BP18089 450 aa12.47□□□□□ -0.41
SNX11-205ENST00000578861 MAP3K19Q56UN5 1328 aa12.46□□□□□ -0.41
SNX11-205ENST00000578861 CYP4F22Q6NT55 531 aa12.46□□□□□ -0.41
SNX11-205ENST00000578861 SLC12A5Q9H2X9 1139 aa12.46□□□□□ -0.41
SNX11-205ENST00000578861 TAF1DQ9H5J8 278 aaPredicted RBP12.46□□□□□ -0.41
SNX11-205ENST00000578861 C4AP0C0L4 1744 aa12.45□□□□□ -0.42
SNX11-205ENST00000578861 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
SNX11-205ENST00000578861 ECE1P42892 770 aa12.45□□□□□ -0.42
SNX11-205ENST00000578861 MAP1SQ66K74 1059 aaPredicted RBP12.45□□□□□ -0.42
SNX11-205ENST00000578861 HDGFL2Q7Z4V5 671 aaPredicted RBP12.45□□□□□ -0.42
SNX11-205ENST00000578861 CNTROBQ8N137 903 aa12.45□□□□□ -0.42
SNX11-205ENST00000578861 ARFGEF1Q9Y6D6 1849 aa12.45□□□□□ -0.42
SNX11-205ENST00000578861 CD163L1Q9NR16 1453 aa12.45□□□□□ -0.42
SNX11-205ENST00000578861 C2CD5Q86YS7 1000 aa12.44□□□□□ -0.42
SNX11-205ENST00000578861 GCC1Q96CN9 775 aa12.44□□□□□ -0.42
SNX11-205ENST00000578861 ATG3Q9NT62 314 aa12.44□□□□□ -0.42
SNX11-205ENST00000578861 SBNO2Q9Y2G9 1366 aa12.43□□□□□ -0.42
SNX11-205ENST00000578861 SBF1O95248 1867 aa12.43□□□□□ -0.42
SNX11-205ENST00000578861 AOC2O75106 756 aa12.43□□□□□ -0.42
SNX11-205ENST00000578861 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
SNX11-205ENST00000578861 POLRMTO00411 1230 aaKnown RBP12.42□□□□□ -0.42
SNX11-205ENST00000578861 DLL1O00548 723 aa12.42□□□□□ -0.42
SNX11-205ENST00000578861 C21orf2O43822 256 aa12.42□□□□□ -0.42
SNX11-205ENST00000578861 RC3H1Q5TC82 1133 aaKnown RBP12.42□□□□□ -0.42
SNX11-205ENST00000578861 TERF2IPQ9NYB0 399 aa12.42□□□□□ -0.42
SNX11-205ENST00000578861 EDC4Q6P2E9 1401 aaKnown RBP12.42□□□□□ -0.42
SNX11-205ENST00000578861 BRCA1P38398 1863 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms